• Title/Summary/Keyword: Se species

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Inadequacy of application of cytokinesis-blocked cells in fish (Rock fish, Sebastes schlegeli) and fowl(chicken) as biological dosimeter for radiation exposure (방사선 피폭의 생물학적 선량측정에 어류(조피볼락, Sebastes schlegeli) 및 조류(닭)의 세포질분열 차단 세포 적용의 부적절성)

  • Kim, Se-Ra;Kim, Tae-Hwan;Ryu, Si-Yun;Jang, Jong-Sik;An, Mi-Young;Kim, Sung-Ho
    • Korean Journal of Veterinary Research
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    • v.42 no.4
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    • pp.451-457
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    • 2002
  • The purpose of the present experiment was to investigate the micronuclei (MN) frequency in cytokinesis-blocked (CB) cells after various doses of gamma-rays in two species (fish and fowl) and so to contribute to the clarification of the question whether these species are suitable as a target organism in the test system. The frequencies of binucleated cells, and gamma-ray-induced MN in CB cells at several doses were measured in three donors of two species. No binucleated cell was noted in erythrocyte. The peaks of binucleated lymphocyte formation were found at a concentration of 2% phytohaemagglutinin (PHA) and $3{\mu}g/m{\ell}$ cytochalasin B (Cyt-B) in fish at 144 hours after incubation and 2% PHA and $6{\mu}g/m{\ell}$ Cyt-B in fowl at 72 hours after incubation. But the micronucleus counts failed to show any evidence of radiation damage. Measurements performed after irradiation showed a dose-related decrease in the formation of binucleated cells in each of the donors studied. Results indicated that the assays were not suitable for this due to blastization inhibition (binucleation failure) after irradiation. We concluded that the use of CB cell from fish and fowl for detecting the results of mdiation exposure was highly questionable.

Community Structure, Phytomass, and Primary Productivity in Thuja orientalis Stands on Limestone Area

  • Kwak, Young-Se;Lee, Choong-Il
    • Environmental Sciences Bulletin of The Korean Environmental Sciences Society
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    • v.3 no.3
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    • pp.189-196
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    • 1999
  • The community structure, phytomass, and primary productivity in Thuja orientalis stands on a limestone area located in Maepo-up, Chungbuk province in Korea were estimated quantitatively. Seven species including a small proportion of Quercus dentata were identified in the tree layer, 26 species including Ulmus macrocarpa in the shrub layer, and 79 species including Carex lnceolata in the herb layer of the Thuja stands. The vertical distribution of the fine root phytomass exhibited a power functional decrease relative to the soil depth. The seasonal changes in the fine root phytomass at a soil depth of 5 cm were closely related to the pecipitation in the study area. The productivity of the stand of stems, branches, leaves, and roots were 10.72, 0.82, 0.45 and 6.46 ton DM. $ha^{-1}$ .$yr^{-1}$, respectively. The Thuja stand had a high foliage(25%) and low rate of production per unit of foliage. The annual turnover rate of the fine roots int he Thuja stand was 6.71 $yr^{-1}$. The net primary production of the overstory including the understory was estimated at 19.48 ton DM.$ha^{-1}$.$yr^{-1}$ including an underground section of 6.46 ton DM.$ha^{-1}$.$yr^{-1}$(33%). The allocation ratio of net production to root was lower in the limestone Thuja communities than at the nearby non-limestone ones, whereas the production efficiency to leaf weight was higher in the limestone communities. These results would seem to indicate that the limited production capacity is due to the calcium toxicity and low availability of iron and phosphorus in a limestone soil with a high pH, calcium, and bicarbonate content with a strategy for survival in a hostile habitat.

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Seasonal Distribution of Zooplankton Communities in Inchon Dock, an Artificially Closed Marine Embayment Facing the Yellow Sea, Western Korea (인천항 선거내 동물플랑크톤 군집의 계절 변동)

  • KIM, SE-WHA;LEE, JIN HWAN
    • 한국해양학회지
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    • v.29 no.4
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    • pp.376-382
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    • 1994
  • Seasonal distribution of zooplankton community in Inchon Dock, an artificially closed marine embayment has been studied. Samples were collected monthly during the period from December 1989 to December 1991 at four stations in the dock and compared with that at a single station in neighbouring waters of the Yellow Sea. Copepods dominated both in and outside of the dock all the year round, except in late autumn and early winter when protozoans outnumbered. dominant species were Oithona davisae, Acartia bifilosa, Paracalanus crassirostris, Noctiluca scintillas and Tintinnopsis tubulosa. A sharp decline in the abundance was observed in summer 1990 in the dock apparently due to oxygen deficiency (anoxic condition). Although no distinct deference in the abundance of zooplankton was observed between populations in and outside of the dock except in summer 1990, waters out of the dock showed to have a prosperity in species number throughout the year. Moreover, four species of copepods, Centropages abdominalis, Pseudodiaptomus marinus, Tortanus forcipatus and T. spinicaudatus occurred solely at the outside of the dock.

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Inter-annual Changes in the Community Structure of Fish Caught by a Both Sides Fyke Net in the Yeosu Coast during the Spring Fishing Period (봄어기 여수 연안 이각망에 어획된 어류 군집구조의 연도별 변화)

  • Yoo, Joon-Taek;Kim, Heeyong;Song, Se Hyun;Kim, Yeong Hye
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.49 no.5
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    • pp.701-710
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    • 2016
  • We examined the inter-annual changes in the community structure of fish in the Yeosu coast during the spring fishing period (May June) from 2008 to 2015. Using a both sides fyke net, we collected 74 taxa, of which the dominant species was Trachurus japonicus. In the years 2009-2010 and 2015, when the relative abundance of T. japonicus decreased, the fish species diversity increased, as estimated from the rarefaction curve and beta-diversity, resulting in a significant difference in the fish community structure between two year groups: one comprising 2009-2010 and 2015 and the other comprising 2008 and 2011-2014. T. japonicus may be a keystone species that plays a critical role in temporal changes in the community structure of fish caught by fyke nets along the southern coast of Korea. Obvious modes in the length-frequency of T. japonicus smaller than fork length (FL) 10 cm were observed continually during the study, while the frequency of T. japonicus bigger than FL 15 cm declined rapidly after 2010. The new recruitment of smaller T. japonicus before and after 2010 appeared beginning in June and May, respectively.

Application of Semi-continuous Ambient Aerosol Collection System for Elemental Analysis (대기입자의 원소성분 배출특성연구를 위한 반-연속식 입자채취시스템 적용)

  • Park, Seung-Shik;Ko, Jae-Min;Lee, Dong-Soo
    • Journal of Korean Society for Atmospheric Environment
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    • v.28 no.1
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    • pp.39-51
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    • 2012
  • Aerosol slurry samples were collected in 60-min interval using Korean Semi-continuous Elements in Aerosol Sampler (KSEAS) between May 19 and June 6, 2010 at an urban site of Gwangju. The $PM_{2.5}$ samples were collected with a flow rate of 16.7 L/min and particles are grown by condensation of water vapor in a condenser maintained at ${\sim}5^{\circ}C$ after saturation by direct injection of steam. The resulting droplets are collected in a liquid slurry with a airdroplet separator. Concentrations of 16 elements (Al, Fe, Mn, Ca, K, Cu, Zn, Pb, Cd, Cr, Ti, V, Ni, Co, As, Se) in the collected slurry samples were determined off-line by ICP-MS. KSEAS sample analysis encompassed the sampling periods for which 24-hr average elemental species concentrations were calculated for comparison with those derived from 24-hr integrated filter samples. Relationship between elemental species measured by two methods indicated high correlation coefficients (r), mostly greater than r of 0.80. However, we note that concentrations of Al, K, Ca, Mn, and Fe, which are often associated with crustal elemental particles, in the KSEAS samples, were substantially lower (1.4~11 times) than those found in the typical filter-based samples. This discrepancy is probably due to difficulties in transferring insoluble dust particles to the collection vials in the KSEAS. Temporal profiles of elemental concentrations indicate that some transient events in their concentrations are observed over the sampling periods. For the elemental species studied, atmospheric concentrations during the transient events increased by factors of 4 in Mn~80 in Zn, compared to their background levels. Principle component analyses were applied to the hourly KSEAS data sets to identify sources affecting the concentrations of the metal constituents observed. In this study, we conclude that hourly measurements for particle-bound elemental constituents were extremely useful for revealing the short-term variability in their concentrations and developing insights into their sources.

Spatio-temporal Characteristics of Cyanobacterial Communities in the Middle-downstream of Nakdong River and Lake Dukdong (낙동강 중, 하류 및 덕동호의 시·공간적 남조류 군집 특성)

  • Park, Hae-Kyung;Shin, Ra-Young;Lee, Haejin;Lee, Kyung-Lak;Cheon, Se-Uk
    • Journal of Korean Society on Water Environment
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    • v.31 no.3
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    • pp.286-294
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    • 2015
  • Temporal and spatial characteristics of cyanobacterial communities at the monitoring stations for Harmful Algal Bloom Alert System (HABAS) in Nakdong River and Lake Dukdong were investigated for two years (2013 to 2014). A total of 30 cyanobacterial species from 14 genera were found at the survey stations. Microcystis sp. showed maximum cell density in the total cyanobacterial community in August, 2014 at ND-2 and in September, 2013 at ND-3 station. Lynbya limnetica and Geitlerinema sp., non-target species for alert criteria showed maximum cell density at ND-1 (August, 2013) and Dam station of Lake Dukdong (September, 2014), respectively. Total cyanobacterial cell density and the relative abundance of four target genera (Microcystis, Anabaena, Aphanizomenon and Oscillatoria spp.) for alert criteria was relatively lower in the mesotrophic Lake Dukdong than at the eutrophic riverine stations of Nakdong River, indicating cyanobacterial density and the RA of target genera is affected by the trophic state of the monitoring stations. Simulating the alert system using phycocyanin concentration as an alert criterion resulted in the longer period of alert issued compared to the period of alert issued using the current criterion of harmful cyanobacterial cell density due to the influence of phycocyanin concentration from non-target cyanobacterial species.

Comparative Tests on the Acid Tolerance of Some Lactic-Acid-Bacteria Species Isolated from Lactic Fermented Products (젖산 발효제품에서 분리한 유산균의 내산성 비교)

  • Sim, Jae-Hun;Oh, Se-Jong;Kim, Sang-Kyo;Baek, Young-Jin
    • Korean Journal of Food Science and Technology
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    • v.27 no.1
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    • pp.101-104
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    • 1995
  • We isolated sixty lactic acid bacteria(LAB) from lactic fermented products. Among 60 isolates of LAB, 30 isolates were identified as Lactobacillus casei ssp.(5 strains), Lactobacillus acidophilus(2 strains), Lactobacillus delbrueckii ssp. bulgaricus(6 strains), Lactobacillus plantarum(4 strains), Streptococcus salivarius ssp. thermophilus(11 strains), and Streptococcus faecalis(2 strains). The acid tolerance and bile resistance of 30 LAB were determined. Because the acid tolerance was affected by the initial cell concentrations, the analysis of covariance could be used to remove the effect of initial cells on acid tolerance when testing for differences in acid tolerance among six species. Viability of LAB under acidic condition, pH 3 for 2 hours at $37^{\circ}C$, was significantly different among the species. L. casei and L. acidophilus strains showed great viability, but L. bulgaricus and S. thermophilus strains were very weak in acid tolerance.

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Insilico profiling of microRNAs in Korean ginseng (Panax ginseng Meyer)

  • Mathiyalagan, Ramya;Subramaniyam, Sathiyamoorthy;Natarajan, Sathishkumar;Kim, Yeon Ju;Sun, Myung Suk;Kim, Se Young;Kim, Yu-Jin;Yang, Deok Chun
    • Journal of Ginseng Research
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    • v.37 no.2
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    • pp.227-247
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    • 2013
  • MicroRNAs (miRNAs) are a class of recently discovered non-coding small RNA molecules, on average approximately 21 nucleotides in length, which underlie numerous important biological roles in gene regulation in various organisms. The miRNA database (release 18) has 18,226 miRNAs, which have been deposited from different species. Although miRNAs have been identified and validated in many plant species, no studies have been reported on discovering miRNAs in Panax ginseng Meyer, which is a traditionally known medicinal plant in oriental medicine, also known as Korean ginseng. It has triterpene ginseng saponins called ginsenosides, which are responsible for its various pharmacological activities. Predicting conserved miRNAs by homology-based analysis with available expressed sequence tag (EST) sequences can be powerful, if the species lacks whole genome sequence information. In this study by using the EST based computational approach, 69 conserved miRNAs belonging to 44 miRNA families were identified in Korean ginseng. The digital gene expression patterns of predicted conserved miRNAs were analyzed by deep sequencing using small RNA sequences of flower buds, leaves, and lateral roots. We have found that many of the identified miRNAs showed tissue specific expressions. Using the insilico method, 346 potential targets were identified for the predicted 69 conserved miRNAs by searching the ginseng EST database, and the predicted targets were mainly involved in secondary metabolic processes, responses to biotic and abiotic stress, and transcription regulator activities, as well as a variety of other metabolic processes.

Unrecorded Liverwort Species from Mt. Deogyu, Korea (덕유산의 한국산 미기록 태류식물)

  • Choi, Seung-Se;Bakalin, Vadim A.;Sun, Byung-Yun
    • Korean Journal of Plant Taxonomy
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    • v.40 no.4
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    • pp.218-225
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    • 2010
  • A total of ten unrecorded liverwort species in the Hepaticae flora of Korea were collected on Mt. Deogyu (1,614 m). The ten species are Tetralophozia filiformis (Steph.) Urmi., Herbertus buchii $Jusl{\acute{e}n$, Bazzania japonica (Sande Lac.) Lindb., Cephaloziella hampeana (Nees) Schiffner ex Loeske., Jungermannia japonica Amak., Marsupella alpina (Gott. ex Husn.) Bernet., Pedinophyllum interruptum (Nees) Kaal., Frullania polyptera Tayl., Jubula hutchinsiae ssp. javanica (Steph.) Verd., and Marchantia polymorpha ssp. montivagans Bischl. and Boisselier-Dubayle. They are distributed near streams and/or at the top of a ridge on Mt. Deogyu.

The reactive oxygen species-total antioxidant capacity score is a new measure of oxidative stress to predict male infertility

  • Sharma, Rakesh K.;Pasqualotto, Fabio F.;Nelson, David R.;Thomas Jr, Anthony J.;Agarwal, Ashok
    • 대한생식의학회:학술대회논문집
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    • 2000.06a
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    • pp.29-35
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    • 2000
  • The imbalance between reactive oxygen species (ROS) production and total antioxidant capacity (TAC) in seminal fluid indicates oxidative stress and is correlated with male infertility. A composite ROS-TAC score may be more strongly correlated with infertility than ROS or TAC alone. We measured ROS, TAC, and ROS-TAC scores in semen from 127 patients and 24 healthy controls. Of the patients, 56 had varicocele, eight had varicocele with prostatitis, 35 had vasectomy reversals, and 28 had Idiopathic infertility. ROS levels were higher among infertile men, especially those with varicocele with prostatitis (mean ${\pm}$ SE, 3.25 ${\pm}$ 0.89) and vasectomy reversals (2.65 ${\pm}$ 1.01). All infertility groups had significantly lower ROS-TAC scores than control. ROS-TAC score identified 80% of patients and was significantly better than ROS at identifying varicocele and idiopathic infertility. The 13 patients whose partners later achieved pregnancies had a mean ROS-TAC score of 47.7 ${\pm}$ 13.2, similar to controls but significantly higher than the 39 patients who remained infertile (35.8 ${\pm}$ 15.0; P < 0.01). ROS-TAC score is a novel measure of oxidative stress and Is superior to ROS or TAC alone in discriminating between fertile and infertile men. Infertile men with male factor or idiopathic diagnoses had significantly lower ROS-TAC scores than controls, and men with male factor diagnoses that eventually were able to initiate a successful pregnancy had significantly higher ROS-TAC scores than those who failed.

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