• Title/Summary/Keyword: STAP

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Epigenetic modification of retinoic acid-treated human embryonic stem cells

  • Cheong, Hyun-Sub;Lee, Han-Chul;Park, Byung-Lae;Kim, Hye-Min;Jang, Mi-Jin;Han, Yong-Mahn;Kim, Seun-Young;Kim, Yong-Sung;Shin, Hyoung-Doo
    • BMB Reports
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    • v.43 no.12
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    • pp.830-835
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    • 2010
  • Epigenetic modification of the genome through DNA methylation is the key to maintaining the differentiated state of human embryonic stem cells (hESCs), and it must be reset during differentiation by retinoic acid (RA) treatment. A genome-wide methylation/gene expression assay was performed in order to identify epigenetic modifications of RA-treated hESCs. Between undifferentiated and RA-treated hESCs, 166 differentially methylated CpG sites and 2,013 differentially expressed genes were discovered. Combined analysis of methylation and expression data revealed that 19 genes (STAP2, VAMP8, C10orf26, WFIKKN1, ELF3, C1QTNF6, C10orf10, MRGPRF, ARSE, LSAMP, CENTD3, LDB2, POU5F1, GSPT2, THY1, ZNF574, MSX1, SCMH1, and RARB) were highly correlated with each other. The results provided in this study will facilitate future investigations into the interplay between DNA methylation and gene expression through further functional and biological studies.

The Antibacterial Effects of Backryeoncho(Opuntia ficus-indica var. saboten) Extracts as Applied to Kimchi Fermentation with Lactic Acid Bacteria and Food Poisoning Bacteria (백련초 추출물의 김치발효 젖산균과 식중독균에 대한 항균효과)

  • Lee, Young-Sook;Sohn, Hee-Sook;Rho, Jeong-Ok
    • Korean Journal of Human Ecology
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    • v.20 no.6
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    • pp.1213-1222
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    • 2011
  • This research evaluated antibacterial and growth inhibition effects on three kinds of lactic acid bacteria and five kinds of food poisoning bacteria using Backryencho powder, hot water, 70% ethanol, and 95% ethanol extracts. Antibacterial activity was shown against Leu. mensenteroides for 8 and 10 mg/disc of the 95% ethanol extract solution and strong proliferation inhibition effects were displayed against B. subtilis, Stap. aureus, E. coli, and S. typhimurium. High antibacterial activity according to certain clear zone formations was shown especially for the 10 mg/disc. A 3% concentration of the 95% ethanol extract showed high growth inhibition effects against lactic acid bacteria, L. brevis, L. plantarum, and Leu. mesenteroids. The measurement of viable cell counts of S. aureus, E. coli, B. subtilis, and S. typhimurium indicated suppression effects by the 3% concentration of the 95% ethanol extract, at 49.60%, 41.54%, 35.95%, 28.82%, and 26.60% respectively. The antibacterial activities of the hot water, 70% ethanol, 95% ethanol extract of Backryencho against food poisoning bacteria and Kimchi fermentation lactic acid bacteria were confirmed through various methods of antibiotic measurement. Based on these results, Backryencho extract is considered a good source for a range of applications as a natural anti-bacterial agent for the storage ability of Kimchi and as a possible food preservative.

A Comparison of Meta-learning and Transfer-learning for Few-shot Jamming Signal Classification

  • Jin, Mi-Hyun;Koo, Ddeo-Ol-Ra;Kim, Kang-Suk
    • Journal of Positioning, Navigation, and Timing
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    • v.11 no.3
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    • pp.163-172
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    • 2022
  • Typical anti-jamming technologies based on array antennas, Space Time Adaptive Process (STAP) & Space Frequency Adaptive Process (SFAP), are very effective algorithms to perform nulling and beamforming. However, it does not perform equally well for all types of jamming signals. If the anti-jamming algorithm is not optimized for each signal type, anti-jamming performance deteriorates and the operation stability of the system become worse by unnecessary computation. Therefore, jamming classification technique is required to obtain optimal anti-jamming performance. Machine learning, which has recently been in the spotlight, can be considered to classify jamming signal. In general, performing supervised learning for classification requires a huge amount of data and new learning for unfamiliar signal. In the case of jamming signal classification, it is difficult to obtain large amount of data because outdoor jamming signal reception environment is difficult to configure and the signal type of attacker is unknown. Therefore, this paper proposes few-shot jamming signal classification technique using meta-learning and transfer-learning to train the model using a small amount of data. A training dataset is constructed by anti-jamming algorithm input data within the GNSS receiver when jamming signals are applied. For meta-learning, Model-Agnostic Meta-Learning (MAML) algorithm with a general Convolution Neural Networks (CNN) model is used, and the same CNN model is used for transfer-learning. They are trained through episodic training using training datasets on developed our Python-based simulator. The results show both algorithms can be trained with less data and immediately respond to new signal types. Also, the performances of two algorithms are compared to determine which algorithm is more suitable for classifying jamming signals.

Antimicrobial Activity and Characteristics of Protamine Extracted from Tuna Spermary (참치백자로부터 추출한 Protamine 의 특성 및 항균활성)

  • Jeon, Tae-Woog;Kim, Jin-Ho;Park, Ki-Moon
    • Korean Journal of Food Science and Technology
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    • v.31 no.2
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    • pp.540-546
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    • 1999
  • The purpose of this study was to investigate the antimicrobial effects and characteristics of protamine extracted from spermary of tuna. The result of amino acids analysis showed that the contents of arginine were 46%. It was 10% lower when compared to standard protamine (SP: Asama kasei LTD, Japan). Also, there were significant difference in the contents of proline adn glycine. The average molecular weights of main protein in TP were 13,400 Da, whereas those in SP were 11,300 Da and 2,600 Da. To increase antimicrobial activities of TP, pepsin or trypsin was treated at $37^{\circ}C$. After TP was hydrolyzed with pepsin (pepsin hydrolyzed protamine: PHP) for 4hrs, the average molecular weights of the main protein were 11,300 Da and 3,900 Da, and the antimicrobial activities were significantly increased compared to TP. After TP was hydrolyzed with trypsin (trypsin hydrolyzed protamine: THP) for more than 10 min, the average molecular weights of the main protein were below 2,500 Da. PHP had higher antimicrobial effects on some gram positive bacteria (Staphylococcus aureus, Lactobacillus helveticus, Lactobacillus plantarum) than SP. However, THP had no antimicrobial activities. When TP was hydrolyzed with pepsin (PHP), its antimicrobial activities increased in the same level with those of SP, and this increase might be resulted rather from the changes of molecular weights of the main protein than from the contents of arginine in protamine.

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