• 제목/요약/키워드: RosettaDock

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3D Structure of STAM1 UIM-ubiquitin Complex Using RosettaDock

  • Lim, Jong-Soo;Yi, Jong-Jae;Ahn, Hee-Chul;Rhee, Jin-Kyu;Son, Woo-Sung
    • 한국자기공명학회논문지
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    • 제15권1호
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    • pp.80-89
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    • 2011
  • 3D structures of STAM1 UIM-ubiquitin complex were presented to predict and analyze the interaction between UIM and ubiquitin. To generate the protein-peptide complex structure, the RosettaDock method was used with and without NMR restraints. High resolution complex structure was acquired successfully and evaluated electrostatic interaction in the protein-peptide binding with several charged residues at the binding site. From docking results, the Rosettadock method could be useful to acquire essential information of protein-protein or protein-peptide interaction with minimal biological evidences.