• 제목/요약/키워드: RS 3 type

검색결과 172건 처리시간 0.028초

Association of GRIA1 polymorphisms with ovarian response to human menopausal gonadotropin in Iranian women

  • Golestanpour, Hossein;Javadi, Gholamreza;Sheikhha, Mohammad Hasan
    • Clinical and Experimental Reproductive Medicine
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    • 제47권3호
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    • pp.207-212
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    • 2020
  • Objective: Glutamate ionotropic receptor AMPA type subunit 1 (GRIA1) is a subunit of a ligand-gated ion channel that regulates the secretion of follicle-stimulating hormone (FSH) and luteinizing hormone (LH) by controlling the release of gonadotropin-releasing hormone. Few studies have investigated the association between the GRIA1 gene and human infertility. This study evaluated the association of the GRIA1 rs548294 C > T and rs2195450 G > A polymorphisms with the ovarian response to human menopausal gonadotropin (HMG) in Iranian women. Methods: One hundred women with histories of at least 1 year of infertility were included. On the second day of menstruation, patients were injected with HMG; on the third day, blood samples were collected. After hormonal analysis, the GRIA1 rs548294 C > T and rs2195450 G > A genotypes of samples were identified via the restriction fragment length polymorphism method, and on day 9, the number of follicles was assessed via ultrasound. Results: For the GRIA1 rs548294 C > T and rs2195450 G > A single nucleotide polymorphisms, the subjects with CT and GG genotypes, respectively, displayed the highest mean FSH level, LH level, and number of follicles on day 9 of the menstrual cycle (p< 0.05). Significant positive correlations were observed between LH and FSH (p< 0.01), LH and follicle count (p< 0.01), FSH and age (p< 0.05), follicle count and age (p= 0.048), and FSH and follicle count (p< 0.01). Conclusion: This study showed a significant relationship between GRIA1 polymorphisms and ovarian response to the induction of ovulation. Therefore, determining patients' GRIA1 genotype may be useful for improving treatment and prescribing suitable doses of ovulation-stimulating drugs.

트랜잭션 어댑터 컴포넌트를 이용한 레거시 시스템의 랩핑에 관한 연구 (A Study on Wrapping of Legacy System using a Transaction Adaptor Component)

  • 황선명;김상영;김정아;진영택
    • 정보처리학회논문지D
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    • 제11D권3호
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    • pp.605-616
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    • 2004
  • 컴포넌트 기반 소프트웨어 설계는 개발된 컴포넌트의 조립을 농한 재사용으로 소프트웨어를 생성하는 것을 목표로 하고 있다. 이때 재사용 되는 컴포넌트들은 용도에 맞게 개조되어야 한다. 본 연구는 이러한 개조 방법을 트랜잭션 어댑터(TA : Transaction Adaptor)라는 개조 컴포넌트를 이용하여 기존의 컴포넌트 또는 기존의 레거시 시스템을 재사용 하는 것에 대한 연구이다. TA를 이용한 개조방법은 클라이언트와 호스트시스템 사이에 TA 컴포넌트를 사용하여, XML데이터를 스트림 형태로 변환하여 전송함으로서 레거시 시스템을 재사용 한다. 또한 응용 프로그램의 개발에 XML 데이터에서 필요로 하는 정보로 가공하는데 룰서버(RS : Rule Server)를 이용함으로서 개발과 유지보수에 많은 효과를 얻을 수 있나. 이러한 TA와 RS를 이용한 재사용 방법은 클라이언트 플랫폼이나 호스트의 종류에 관계없이 TA가 XML 데이터 변환처리하고, RS가 데이터의 처리를 수행하여 레거시 시스템을 재사용 할 수 있다.

TLR1 Polymorphism Associations with Gastric Mucosa Morphologic Patterns on Magnifying NBI Endoscopy: a Prospective Cross-Sectional Study

  • Tongtawee, Taweesak;Bartpho, Theeraya;Kaewpitoon, Soraya;Kaewpitoon, Natthawut;Dechsukhum, Chavaboon;Leeanansaksiri, Wilairat;Loyd, Ryan A;Matrakool, Likit;Panpimanmas, Sukij
    • Asian Pacific Journal of Cancer Prevention
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    • 제17권7호
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    • pp.3391-3394
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    • 2016
  • Background: Helicobacter pylori is now recognized as a causative factor of chronic gastritis, gastroduodenal ulcers, gastric cancer and mucosa-associated lymphatic tissue lymphoma. Toll-like receptors are important bacterial receptors in gastric epithelial cell signaling transduction and play critical roles in gastric carcinogenesis. Materials and Methods: A total of 400 patients undergoing esophagogastroduodenoscopy for investigation of chronic abdominal pain were genotyped for single-nucleotide polymorphisms (SNPs) in TLR1 (rs4833095) using TagMan SNPs genotyping assay by real-time PCR hybridization. Relationships with susceptibility to H. pylori infection and pre-malignant gastric mucosa morphological patterns, classified by magnifying NBI endoscopy, were investigated. Results: The percentages of TLR1 rs4833095, CC homozygous, CT heterozygous and TT homozygous cases were 34, 46.5 and 19%, respectively. CC showed statistical differences between H. pylori positive and negative cases (P<0.001). CT and TT correlated with type 1 and type 2 gastric mucosal morphological patterns (P <0.01) whereas CC correlated with types 3 and 4 (P<0.01). Conclusions: This study demonstrated good correlation of TLR1 rs4833095 genotype with severity of inflammation in H. pylori infected gastric mucosa according to gastric mucosal morphologic patterns with magnifying NBI endoscopy.

Analysis of Microbial Communities in Biofilms from CSTR-Type Hollow Fiber Membrane Biofilm Reactors for Autotrophic Nitrification and Hydrogenotrophic Denitrification

  • Shin, Jung-Hun;Kim, Byung-Chun;Choi, Okkyoung;Kim, Hyunook;Sang, Byoung-In
    • Journal of Microbiology and Biotechnology
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    • 제25권10호
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    • pp.1670-1679
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    • 2015
  • Two hollow fiber membrane biofilm reactors (HF-MBfRs) were operated for autotrophic nitrification and hydrogenotrophic denitrification for over 300 days. Oxygen and hydrogen were supplied through the hollow fiber membrane for nitrification and denitrification, respectively. During the period, the nitrogen was removed with the efficiency of 82-97% for ammonium and 87-97% for nitrate and with the nitrogen removal load of 0.09-0.26 kg NH4+-N/m3/d and 0.10-0.21 kg NO3--N/m3/d, depending on hydraulic retention time variation by the two HF-MBfRs for autotrophic nitrification and hydrogenotrophic denitrification, respectively. Biofilms were collected from diverse topological positions in the reactors, each at different nitrogen loading rates, and the microbial communities were analyzed with partial 16S rRNA gene sequences in denaturing gradient gel electrophoresis (DGGE). Detected DGGE band sequences in the reactors were correlated with nitrification or denitrification. The profile of the DGGE bands depended on the NH4+ or NO3- loading rate, but it was hard to find a major strain affecting the nitrogen removal efficiency. Nitrospira-related phylum was detected in all biofilm samples from the nitrification reactors. Paracoccus sp. and Aquaspirillum sp., which are an autohydrogenotrophic bacterium and an oligotrophic denitrifier, respectively, were observed in the denitrification reactors. The distribution of microbial communities was relatively stable at different nitrogen loading rates, and DGGE analysis based on 16S rRNA (341f /534r) could successfully detect nitrate-oxidizing and hydrogen-oxidizing bacteria but not ammonium-oxidizing bacteria in the HF-MBfRs.

산가수분해한 유채대로부터 유리당의 분리 및 이의 잔사로부터 펠릿의 제조 (Separation of Reducing Sugars from Rape Stalk by Acid Hydrolysis and Fabrication of Fuel Pellets from its Residues)

  • 양인;안병준;김명용;오세창;안세희;최인규;김용현;한규성
    • 한국자원식물학회지
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    • 제27권1호
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    • pp.60-71
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    • 2014
  • 본 연구는 유채의 바이오리파이너리 원료화 가능성을 확인하기 위하여 유채대를 DW, AA, OA, SA 및 SH 용액에 침지하였다. 먼저 침지 유채대의 원소를 분석한 결과, 침지를 통하여 질소, 황, 염소의 함량이 효과적으로 감소되는 것을 확인하였다. 이 외에 침지액의 농도와 침지시간을 실험인자로 침지액 내에 존재하는 glucose, xylose, arabinose와 같은 유리당의 양을 조사하였는데, DW- 및 SH-침지액에서는 각각 xylose와 sucrose만 그리고 SA- 및 OA-침지액에서는 소량의 glucose만 검출되었다. 그러나 AA-침지액에서는 많은 양의 glucose와 소량의 arabinose까지 분석되었다. 한편, 유채대 침지에 사용된 산용액의 종류와 농도(1%, 2%)에 따른 glucose 양을 분석한 결과, AA를 침지액의 조제를 위한 산으로 사용하고 AA의 농도를 1%로 조절하는 것이 유채대로부터 효과적으로 glucose를 가수분해할 수 있는 조건인 것으로 조사되었다. 침지시간의 영향을 보면, 72 hr-침지에서 가장 많은 양의 glucose가 검출되었으며, 120 hr까지의 침지시간 연장은 유리되는 glucose 양에 부정적인 영향을 미쳤다. 다음으로, DW, AA, OA 용액에 침지시킨 유채대를 이용하여 펠릿을 제조하였는데, 이 때 산의 농도 그리고 침지시간(24, 72, 120 hr)을 실험 인자로 사용하였으며, 이렇게 제조된 펠릿의 함수율, 겉보기밀도, 회분량, 발열량, 내구성을 측정하였다. 침지 유채대 펠릿의 겉보기 밀도와 발열량은 무침지 유채대 펠릿과 비교하여 크게 높았으며, 실험 인자와 상관없이 EN 규격의 A등급 기준($${\leq_-}600kg/m^3$$, $${\qeq_-}14.1MJ/kg$$)을 각각 상회하였다. 유채대의 침지는 무침지 유채대의 회분량(8.9%)과 비교하여 회분량을 크게 감소시켰으며, 특히 AA-와 DW-침지가 유채대의 회분량 감소에 효과적인 것으로 나타났다. 또한 침지 유채대의 회분량은 EN 규격의 A등급 기준($${\leq_-}5.0%$$)을 만족하였다. 침지 유채대로 제조한 펠릿의 내구성은 전반적으로 무침지 유채대 펠릿(97.40%)보다 낮았으며, 특히 OA-2%에 120 hr 침지시킨 유채대 펠릿을 제외하고 나머지 조건은 EN 규격의 B등급($${\qeq_-}96.00%$$) 기준에 만족하지 않는 것으로 조사되었다. 침지 유채대의 원소 및 유리당 분석 그리고 펠릿의 품질 시험 결과를 종합하면, 1% 농도의 AA 용액에 유채대를 72 hr동안 침지시키는 것이 유채대의 바이오에탄올 및 펠릿 원료화를 위한 최적조건이라는 결론을 얻었다. 따라서 이 조건에서 1 kg의 유채대를 침지시켰을 경우, 산술적으로 바이오에탄올 생산용 원료인 50 g의 glucose를 얻을 수 있으며, 나머지 950 g의 잔사는 아그로펠릿의 원료로 사용이 가능할 것으로 생각한다. 그러나 AA-침지 유채대로 제조한 펠릿의 낮은 내구성 문제를 해결하기 위하여 세분화된 범위의 침지 조건 탐색, 목분과의 혼합 펠릿 제조, 바인더의 첨가 등과 같은 추가 연구가 수행되어야 할 것으로 생각한다.

The overexpression of Arachis hypogaea resveratrol synthase 3 (AhRS3) modified the expression pattern of phenylpropanoid pathway genes in developing rice seeds

  • Lee, Choonseok;Jeong, Namhee;Kim, Dool-Yi;Ok, Hyun-Choong;Choi, Man-Soo;Park, Ki-Do;Kim, Jaehyun
    • 한국작물학회:학술대회논문집
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    • 한국작물학회 2017년도 9th Asian Crop Science Association conference
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    • pp.167-167
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    • 2017
  • Our previous study for developing seeds of Iksan 526 (I.526), an inbred line of resveratrol-producing transgenic rice line, showed that, in 20 days after heading (DAH) seeds, resveratrol was almost saturated and accumulation of piceid was highest though the expression of Arachis hypogaea resveratrol synthase 3 (AhRS3, GenBank DQ124938) was highest in 31 DAH seeds. In this study, it was investigated how the overexpression of AhRS3 affects phenylpropanoid pathway genes. p-Coumaroyl-CoA is derived from phenylpropanoid pathway and used as a substrate of AhRS3 reaction for resveratrol production. In 6, 13, 20, 31 and 41 (45 for Dongjin) DAH seeds of I526 and Dongjin, a wild type of I.526, respectively, the expression pattern of phenylpropanoid pathway genes, including phenylalanine ammonia-lyase (PAL: LOC_Os02g41630.2, LOC_Os04g43760.1), cinnamate 4-hydroxylase (C4H: LOC_Os05g25640.1), 4-coumarate-CoA ligase (4CL: LOC_Os02g08100.1), cinnamoyl-CoA reductase (CCR: LOC_ Os09g25150.1, LOC_Os08g34280.1), hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase (HCT: LOC_Os04g42250.2, LOC_Os02g39850.1) and cinnamyl alcohol dehydrogenase (CAD: LOC_Os02g09490.1), was examined using real time (RT)-PCR. Compared to developing seeds of Dongjin, RT-PCR results showed that the expression pattern of phenylpropanoid pathway genes was modified in developing seeds of I.526. In most genes, except for CAD, of I.526 developing seeds, the gene expression was highest in 20 DAH corresponding to biosynthesis of resveratrol and piceid, i.e. the expression of phenylpropanoid pathway genes was gradually increased by 20 DAH and decreased as seeds develop. Especially, in Dongjin, the highest expression of PALs and 4CL was in 6 DAH and their expression was gradually decreased as seeds develop. These genes expression data also exhibited that, in developing seeds of I.526, phenylpropanoid pathway genes were slightly or significantly (in some genes) upregulated compared to Dongjin. Therefore, the overexpression of AhRS3 changed the expression pattern of phenylpropanoid pathway genes in I.526 developing seeds and this modification for gene expression is closely related to biosynthesis of resveratrol and piceid.

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The overexpression of Arachis hypogaea resveratrol synthase 3 (AhRS3) modified the expression pattern of phenylpropanoid pathway genes in developing rice seeds

  • Lee, Choonseok;Jeong, Namhee;Kim, Dool-Yi;Ok, Hyun-Choong;Choi, Man-Soo;Park, Ki-Do;Kim, Jaehyun
    • 한국작물학회:학술대회논문집
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    • 한국작물학회 2017년도 9th Asian Crop Science Association conference
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    • pp.105-105
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    • 2017
  • Our previous study for developing seeds of Iksan 526 (I.526), an inbred line of resveratrol-producing transgenic rice line, showed that, in 20 days after heading (DAH) seeds, resveratrol was almost saturated and accumulation of piceid was highest though the expression of Arachis hypogaea resveratrol synthase 3 (AhRS3, GenBank DQ124938) was highest in 31 DAH seeds. In this study, it was investigated how the overexpression of AhRS3 affects phenylpropanoid pathway genes. p-Coumaroyl-CoA is derived from phenylpropanoid pathway and used as a substrate of AhRS3 reaction for resveratrol production. In 6, 13, 20, 31 and 41 (45 for Dongjin) DAH seeds of I526 and Dongjin, a wild type of I.526, respectively, the expression pattern of phenylpropanoid pathway genes, including phenylalanine ammonia-lyase (PAL: LOC_Os02g41630.2, LOC_Os04g43760.1), cinnamate 4-hydroxylase (C4H: LOC_Os05g25640.1), 4-coumarate-CoA ligase (4CL: LOC_Os02g08100.1), cinnamoyl-CoA reductase (CCR: LOC_Os09g25150.1, LOC_Os08g34280.1), hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase (HCT: LOC_Os04g42250.2, LOC_Os02g39850.1) and cinnamyl alcohol dehydrogenase (CAD: LOC_Os02g09490.1), was examined using real time (RT)-PCR. Compared to developing seeds of Dongjin, RT-PCR results showed that the expression pattern of phenylpropanoid pathway genes was modified in developing seeds of I.526. In most genes, except for CAD, of I.526 developing seeds, the gene expression was highest in 20 DAH corresponding to biosynthesis of resveratrol and piceid, i.e. the expression of phenylpropanoid pathway genes was gradually increased by 20 DAH and decreased as seeds develop. Especially, in Dongjin, the highest expression of PALs and 4CL was in 6 DAH and their expression was gradually decreased as seeds develop. These genes expression data also exhibited that, in developing seeds of I.526, phenylpropanoid pathway genes were slightly or significantly (in some genes) upregulated compared to Dongjin. Therefore, the overexpression of AhRS3 changed the expression pattern of phenylpropanoid pathway genes in I.526 developing seeds and this modification for gene expression is closely related to biosynthesis of resveratrol and piceid.

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도서관 네트워크의 구조적 분석 (A STRUCTURAL ANALYSIS OF INTER-LIBRARY NETWORKS: A REGIONAL ILL NETWORK IN THE WESTERN NEW YORK 3Rs REGION)

  • 유사라
    • 정보관리학회지
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    • 제6권1호
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    • pp.37-56
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    • 1989
  • This study is a structural analysis of a multi-type and multi-level library network within the framework of a regional interlibrary loan (ILL) system. The study monitored to information network structure for resource sharing of academic and research library materials transmitted through the ILL. The local flow of academic and research information was measured by a survey of the filled ILL transactions by individual libraries in the Western 3Rs region. The major findings were as follows: 1) the regional ILL network showed less than half of participation of the total subject libraries, 2) existing structure surveyed was identified as a composite centralized network with three communication groups, 3) depending on the types of materials transacted, the structure were changed, 4) statewide and multi-state library cooperatives had direct interactions with some of the local libraries, 5) individual libraries participated in the ILL network more for periodicals than book materials, 6) academic libraries throughout the total six structure analyzed showed the highest percentage of participation.

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Interaction between thyroglobulin and ADAMTS16 in premature ovarian failure

  • Pyun, Jung-A;Kim, Sunshin;Kwack, KyuBum
    • Clinical and Experimental Reproductive Medicine
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    • 제41권3호
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    • pp.120-124
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    • 2014
  • Objective: The aim of the present study was to examine whether interactions between polymorphisms in the thyroglobulin and ADAM metallopeptidase with thrombospondin type 1 motif, 16 (ADAMTS16) genes are associated with the development of premature ovarian failure (POF). Methods: A total of 75 patients with POF and 196 controls were involved in this study. We used a GoldenGate assay to genotype single nucleotide polymorphisms (SNPs). Logistic regression analysis was performed to identify POF-associated polymorphisms and synergistic interactions between polymorphisms in the thyroglobulin and ADAMTS16 genes. Results: Single gene analyses using logistic regression analysis showed no significant association between polymorphisms in the two genes and POF. In the results from interaction analyses, we found seven synergistic interactions between the polymorphisms in thyroglobulin and ADAMTS16, although there was no combination showing p-values lower than the significant threshold using the Bonferroni correction. When the AG genotype was present at the rs853326 missense SNP, the A and G alleles at the tagging SNPs rs16875268 and rs13168665 showed significant interactions (odds ratios=5.318 and 16.2 respectively; 95% confidence intervals, 1.64-17.28 and 2.08-126.4; p=0.0054 and 0.0079). Conclusion: Synergistic interactions between polymorphisms in the thyroglobulin and ADAMTS16 genes were associated with an increased risk of POF development in Korean women.

폐수처리장의 바이오 필터로부터 분리된 Comamonas sp. NLF-7-7 균주의 유전체 염기서열 해독 (Complete genome sequence of Comamonas sp. NLF-7-7 isolated from biofilter of wastewater treatment plant)

  • 김동현;한국일;권해준;김미경;김영국;최두호;이근철;서민국;김한솔;이정숙;김종국
    • 미생물학회지
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    • 제55권3호
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    • pp.309-312
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    • 2019
  • 본 연구에서는 폐수처리장의 바이오필터로부터 Comamonas sp. NLF-7-7 균주를 분리하고 유전체서열을 PacBio RS II와 Illumina HiSeqXten 플랫폼을 사용하여 분석하였다. 염색체의 크기는 3,333,437 bp로 G + C 구성 비율은 68.04%, 총 유전자수는 3,197개, rRNA는 9개 및 tRNA는 49개로 구성되었다. 본 유전체는 오염물질분해와 플록형성에 관여하는 황산화 경로 유전자(SoxY, SoxZ, SoxA 및 SoxB)와 플록형성 경로 유전자(EpsG, EpsE, EpsF, EpsG, EpsL 및 glycosyltransferase)를 포함하고 있다. 이러한 Comamonas sp. NLF-7-7 균주는 폐수를 정화하는데 활용될 수 있다.