• 제목/요약/키워드: RNA Polymerase II

검색결과 155건 처리시간 0.034초

Characterization of the molecular and biological properties between the equine herpesvirus type 1 immediate-early protein and the general transcription factor human TFIIB

  • Jang Hyung-Kwan
    • 한국동물위생학회지
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    • 제27권4호
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    • pp.355-369
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    • 2004
  • The equine herpesvirus type 1 (EHV-1) immediate-early (IE) protein is a potent transactivator responsible for the activation of both early and late genes during the course of infection and is comprised of discrete functional domains that mediate its many functions. Interaction between trans activators such as the IE protein and various components of the RNA polymerase II transcription initiation machinery has been demonstrated to be critical for transactivation. In the present report, it is addressed the hypothesis that the IE protein interacts with various components of transcription machinery to mediate transactivation of target viral genes. In these studies, it is demonstrated that in vitro transcribed and translated IE protein interacts with TFIIB-agarose conjugate but not with TFIID-agarose conjugate. Additional immunoprecipitation studies using nuclear extracts derived from EHV-1 infected RK-13 cells confirmed that the IE protein interacts strongly with TFIIB, but fails to interact with TFIID. IR2, a truncated form of the IE protein lacking the potent transactivation domain and involved in the down-regulation of the IE gene, also interacted with TFIIB but not with TFIID. Studies were also performed to ascertain if particular TBP-associated factors (TAFs) could mediate IE or IR2 binding to TFIID. In vitro transcribed and translated TAF250 added to nuclear extracts generated from EHV-1 infected cells also failed to mediate an interaction between the IE protein or the IR2 protein and TFIID. This study demonstrated that the IE protein mediates transactivation of target viral genes by a mechanism that involves TFIIB. This is in contrast to mechanisms that have been proposed for both the herpes simplex virus ICP4 and VP16 protein which have been proposed to transactivate viral genes through interactions involving both TFIIB and TFIID. This study also intimates that IR2 mediate its repressive effects during the course of EHV-1 infection by a mechanism that involves sequestration of various transcription factors.

Taxonomy of Arthrinium minutisporum sp. nov., Pezicula neosporulosa, and Acrocalymma pterocarpi: New Records from Soil in Korea

  • Das, Kallol;Lee, Seung-Yeol;Choi, Hyo-Won;Eom, Ahn-Heum;Cho, Young-Je;Jung, Hee-Young
    • Mycobiology
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    • 제48권6호
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    • pp.450-463
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    • 2020
  • The strains 17E-042, 17E-039, and NC13-171 belong to Ascomycota and were isolated from soil collected from Sancheong-gun and Yeongam-gun, Korea. The strain 17E-042 produced white mycelial colonies that developed a sienna color with a round margin on potato dextrose agar (PDA), and the reverse side developed a light sienna color. Morphologically, this strain was similar to the strains of Arthrinium phragmites and A. hydei, but the shorter conidial size of the newly identified strain (17E-042) was distinct. The strain 17E-039 produced macroconidia that were pale yellow to orange-brown, elongated-ellipsoid to oblong, round at both ends, primarily straight but sometimes slightly curved, 0-septate, thin-walled, and filled with numerous droplets, having diameters of 20.4-34.3 × 8.0-12.0 ㎛. And the strain NC13-171 formed hyaline to light brown chlamydospores, solitary or in a chain. Multigene phylogenetic analyses were conducted using sequence data obtained from internal transcribed spacer (ITS) regions, 28S rDNA large subunit (LSU), β-tubulin (TUB2), translation elongation factor 1-alpha (TEF1-α), and RNA polymerase II large subunit (RPB2) genes. The results of molecular phylogeny, the detailed descriptions and illustrations of each species strongly support our proposal that these strains from soil in Korea be designated as Arthrinium minutisporum sp. nov. and two new records of Pezicula neosporulosa and Acrocalymma pterocarpi.

Neocucurbitaria chlamydospora sp. nov.: A Novel Species of the Family Cucurbitariaceae Isolated from a Stink Bug in Korea

  • Soo-Min Hong;Kallol Das;Seong-Keun Lim;Sang Jae Suh;Seung-Yeol Lee;Hee-Young Jung
    • Mycobiology
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    • 제51권3호
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    • pp.115-121
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    • 2023
  • The fungal strain KNUF-22-18B, belonging to Cucurbitariaceae, was discovered from a stink bug (Hygia lativentris) during the investigation of insect microbiota in Chungnam Province, South Korea. The colonies of the strain KNUF-22-18B were wooly floccose, white to brown in the center on oatmeal agar (OA), and the colonies were buff, margin even, and colorless, reverse white to yellowish toward the center on malt extract agar (MEA). The strain KNUF-22-18B produced pycnidia after 60 days of culturing on potato dextrose agar, but pycnidia were not observed on OA. On the contrary, N. keratinophila CBS 121759T abundantly formed superficial pycnidia on OA and MEA after a few days. The strain KNUF-22-18B produced chlamydospores subglobose to globose, mainly in the chain, with a small diameter of 4.4-8.8 ㎛. At the same time, N. keratinophila CBS 121759T displayed a globose terminal with a diameter of 8-10 ㎛. A multilocus phylogeny using the internal transcribed spacer regions, 28S rDNA large subunit, b-tubulin, and RNA polymerase II large subunit genes further validated the uniqueness of the strain. The detailed description and illustration of the proposed species as Neocucurbitaria chlamydospora sp. nov. from Korea was strongly supported by molecular phylogeny.

Bisphenol A가 흰쥐의 태반 기능과 출산에 미치는 영향 (Effects of Bisphenol A on the Placental Function and Reproduction in Rats)

  • 이채관;김석현;문덕환;김정호;손병철;김대환;이창희;김휘동;김정원;김종은;이채언
    • Journal of Preventive Medicine and Public Health
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    • 제38권3호
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    • pp.330-336
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    • 2005
  • Objectives : The aim of this study was to investigate the effects of bisphenol A (BPA), an estrogen-like environmental endocrine disrupter, on the placental function and reproduction in rats. The mRNA levels of the placental prolactin-growth hormone(PRL-GH) gene family, placental trophoblast cell frequency and reproductive data were analyzed. Methods : The pregnancies of F344 Fisher rats ($160g{\pm}20g$) were detected by the presence of the copulatory plug or sperm in the vaginal smear, which marked Day 0 of pregnancy. Pregnant rats were divided into three groups. The control group was intraperitoneally injected with a sesame oil vehicle. The two remaining groups were injected with 50 or 500 mg/kg B.W/day of BPA, resuspended in sesame oil, on either days 7 to 11 or 16 to 20 of pregnancy, with the rats sacrificed on either day 11 or 20, respectively. The mRNA levels of PRL-GH and Pit-1a and b isotype genes were analyzed by Northern blot hybridization and reverse transcription-polymerase chain reaction. The hormone concentrations were analyzed by radioimmunoassay, and the frequency of the placental trophoblast cells observed by a histochemical study. Reproductive data, such as the placental weight and litter size, were surveyed on day 20. The fetal weight was surveyed for 4 weeks after birth. A statistical analysis was carried out using the SAS program (version 8.1). Results : The mRNA levels of the PRL-GH gene family, such as placental lactogen I, Iv and II, prolactin like protein A, C and Cv, and decidual prolactin-related protein were significantly reduced due to BPA exposure. The mRNA levels of the Pit-1a and b isotype genes, which induce the expression of the PRL-GH gene family in the rat placenta, were also reduced due to BPA exposure. The PL-Iv and PL-II concentrations were reduced in the BPA exposed group. During the middle to last stage of pregnancy (Days 11-20), a high dose of BPA exposure reduced the frequency of spongiotrophoblast cells, which are responsible for the secretion of the PRL-GH hormones. Reproductive data, such as the placental and fetal weights and the litter size, were reduced, but that of the pregnancy period was extended in the BPA exposed compared to the control group. Conclusions : BPA disrupts the placental functions in rats, which leads to reproductive disorders.

蜈蚣(오공) 약침액(藥鍼液)이 LPS로 처리된 RAW 세포주(細胞柱)의 유전자(遺傳子) 발현(發顯)에 미치는 영향(影響) (Microarray analysis of gene expression in raw cells treated with scolopendrae corpus herbal-acupuncture solution)

  • 배은희;이경민;이봉효;임성철;정태영;서정철
    • Korean Journal of Acupuncture
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    • 제23권3호
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    • pp.133-160
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    • 2006
  • Objectives : Scolopendrae Corpus has a broad array of clinical applications in Korean medicine, including treatment of inflammatory conditions such as arthritis. To explore the global gene expression profiles in human Raw cell lines treated with Scolopendrae Corpus herbal-acupuncture solution (SCHAS), cDNA microarray analysis was performed. Methods : The Raw 264.7 cells were treated with lipopolysaccharide (LPS), SCHAS, or both. The primary data was normalized by the total spots of intensity between two groups, and then normalized by the intensity ratio of reference genes such as housekeeping genes in both groups. The expression ratio was converted to log2 ratio. Normalized spot intensities were calculated into gene expression ratios between the control and treatment groups. Greater than 2 fold changes between two groups were considered to be of significance. Results : Of the 8 K genes profiled in this study, with a cut-off level of two-fold change in the expression, 20 genes (BCL2-related protein A1, MARCKS-like 1, etc.) were upregulated and 5 genes (activated RNA polymerase II transcription cofactor 4, calcium binding atopy-related autoantigen 1, etc.) downregulated following LPS treatment. 139 genes (kell blood group precursor (McLeod phenotype), ribosomal protein S7, etc.) were upregulated and 42 genes (anterior gradient 2 homolog (xenopus laevis), phosphodiesterase 8B, etc.) were downregulated following SCHAS treatment. And 10 genes (yeast saccharomyces cerevisiae intergeneic sequence 4-1, mitogen-activated protein kinase 1, etc.) were upregulated and 8 genes (spermatid perinuclear RNA binding protein, nuclear receptor binding protein 2, etc.) were downregulated following co-stimulation of SCHAS and LPS. Discussions : It is thought that microarrays will play an ever-growing role in the advance of our understanding of the pharmacological actions of SCHAS in the treatment of arthritis. But further studies are required to concretely prove the effectiveness of SCHAS.

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분화중인 흰쥐 유선내 Luteinizing Hormone (LH) 유전자 발현의 생리적인 조절 (Physiological Regulation of Luteinizing Hormone(LH) Expression in Rat Mammary Gland during Differentiation)

  • 이성호
    • 한국발생생물학회지:발생과생식
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    • 제5권2호
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    • pp.175-180
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    • 2001
  • 태반이나 생식소 등 시상하부 이외의 조직에서도 gonadotropin releasing hormone(GnRH)과 그 수용체가 발현되어 조직 특이적인 기능을 담당함은 잘 알려진 사실이다. 최근 GnRH와 그 수용체 유전자가 흰쥐 유선에서도 발현됨이 증명되었고, LH $\alpha$-와 $\beta$-subunit와 LH 수용체에 대한 전사체 역시 흰쥐 유선에 존재함이 확인되었다 본 연구는 흰쥐 유선 LH의 발현과 유선의 분화과정 간의 상관관계를 조사하기 위해서 생식주기, 임신, 수유, 이유기에 걸쳐 얻은 유선을 재료로 LH 함량 변화를 방사면역측정법으로 측정하였다. 또한 동일한 실험동물에서 얻은 RNA를 사용한 reverse transcription-polymerase chain reaction(RT-PCR)과 Southern blot analysis를 통해 전사수준에서의 변화를 측정하였다. 난소 steroid에 의한 유선 LH의 발현조절 가능성을 조사하기 위해서 난소 제거(ovariectomy, OVX)후 steroid 처리 실험동물 모델을 사용하였다. 생식주기중인 흰쥐의 혈중 LH수준과 유선 내 LH 함량의 변화는 공히 proestrus 시기에 가장 높고 diestrus I 시기에 최저 수준을 보였다. 임신 17일 경으로부터 이유기까지 혈중 LH 수준은 등락을 보였으나, 유선 LH 함량은 수유기 중 현저히 감소한 후 이유기에 상승하였다. Southern blot analysis에서 흰쥐 유선 내 GnRH와 LH의 발현은 대체로 diestrus I 시기에 가장 낮고 이후 diestrus II, proestrus, estrus 시기를 거치며 증가하였고 임신 이후 수유기와 이유기까지 높은 수준으로 유지됨이 확인되었다. 한편 OVX 실험 동물모델에서 혈중 LH 수준은 예상한 바처럼 estrogen에 의한 negative feedback의 작용으로 OVX+OIL 실험군(418.6$\pm$73.4 ng/ml)에 비해 OVX+E$_2$ 실험군(125.9$\pm$45.4 ng/ml)에서 감소하였으며, 유선 내 LH 함량 역시 OVX+OIL 실험군(1.48$\pm$0.20 na/mg)에 비해 OVX+E$_2$ 실험군(1.07$\pm$0.13 ng/mg)에서 유의성 있게 감소하였다. 본 연구결과는 유선 LH가 생식주기, 임신, 수유, 이유 등의 생리적인 변화에 맞물려 조절되고, 특히 estrogen에 의해 유선 LH 합성이 조절될 수 있음을 시사하였다. 유선 LH의 기능으로는 모유의 생산ㆍ분비와 유선 상피세포의 분화와 같은 유선의 기능과 생리조절에 관여하는 것으로 추정된다.

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접골목(接骨木)추출물 및 약침액에 의한 MIF 활성 조절능이 생쥐의 제2형 Collagen 유발 관절염에 미치는 영향 (Effect of Suppressing the Activation of Macrophage Migration Inhibitory Factor by $Sambucus$ $williamsii$ $H_{ANCE}$ Extract & Pharmacopuncture Solution on Type II Collagen-induced Arthritis)

  • 이동건;김은정;이은솔;왕개하;조현석;이승덕;김갑성;김경호
    • Journal of Acupuncture Research
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    • 제29권1호
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    • pp.103-113
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    • 2012
  • Objectives : The purpose of this study is to evaluate effect of suppressing the expression of cyclo-oxygenase-type-2 (COX-2) as a consequence of inhibition macrophage migration inhibitory factor (MIF) activation by $Sambucus$ $williamsii$ $Hance$ (SWH) pharmacopunctureon rheumatoid arthritis (RA). Methods : In vitro test, synoviocytes extracted from type II collagen-induced arthritis (CIA) mouse's knee joint were cultivated After that, each well of synoviocytes was mixed with the extract of SWH at the dosage of $0.4mg/m{\ell}$, $0.6mg/m{\ell}$, $0.8mg/m{\ell}$, and $1.0mg/m{\ell}$ respectively, and cultivated for 24 hours after the addition. Reverse transcriptase - polymerase chain reaction (RT-PCR) is used to investigate the expression of MIF, Tumor necrosis factor (TNF)-${\alpha}$, COX-2 mRNA. $In$ $vivo$ test, thirty DBA female mice were used, and each ten mice were allocated into three group; normal group, CIA-elicitated group, and group treated with SWH pharmacopuncture on it's the point of $ST_{35}$ after CIA elicitation. It is investigated that change of mice foot thickness, histologic change of sliced synovial joint of mouse, and extent change of MIF, TNF-${\alpha}$, COX-2 in synovial membrane. Results : $In$ $vitro$ test, the expressions of cytokine(MIF, TNF-${\alpha}$, COX-2) mRNAs related to RA were dose-dependent decreased. In the SWH pharmacopuncture group, foot thickness and histologic change of sliced synovial joint were decreased comparing with CIA-elicitated group's change. In the SWH pharmacopuncture group, the suppression of MIF, TNF-${\alpha}$, COX-2 in synovial membrane was clearly shown comparing with CIA-elicitated group's change. Conclusions : It might be suggested that SWH pharmacopuncture mitigate tissue damage originated from rheumatoid arthritis by suppressing the expression of COX-2 as a consequence of inhibition MIF activation.

Expression of $interferon$ $regulatory$ factor-1 in the mouse cumulus-oocyte complex is negatively related with oocyte maturation

  • Kim, Yun-Sun;Kim, Eun-Young;Moon, Ji-Sook;Yoon, Tae-Ki;Lee, Woo-Sik;Lee, Kyung-Ah
    • Clinical and Experimental Reproductive Medicine
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    • 제38권4호
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    • pp.193-202
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    • 2011
  • Objective: We found previously that $interferon$ $regulatory$ factor ($Irf$)-1 is a germinal vesicle (GV)-selective gene that highly expressed in GV as compared to metaphase II oocytes. To our knowledge, the function of $Irf-1$ in oocytes has yet to be examined. The present study was conducted to determine the relationship between retinoic acid (RA) and RA-mediated expression of $Irf-1$ and the mouse oocyte maturation. Methods: Immature cumulus-oocyte-complexes (COCs) were collected from 17-day-old female mice and cultured $in$ $vitro$ for 16 hours in the presence of varying concentrations of RA (0-10 ${\mu}M$). Rate of oocyte maturation and activation was measured. Gene expression was measured by quantitative real-time reverse transcription-polymerase chain reaction (RT-PCR) and cytokine secretion in the medium was measured by Bio-Plex analysis. Apoptosis was analyzed by terminal deoxynucleotidyl transferase dUTP nick end labeling (TUNEL) assay. Results: The rates of oocyte maturation to metaphase II and oocyte activation increased significantly with RA treatment (10 nM-1 ${\mu}M$). With 100 nM RA treatment, lowest level of $Irf-1$ mRNA and cumulus cell's apoptosis was found. Among 23 cytokines measured by Bio-Plex system, the substantial changes in secretion of tumor necrosis factor-${\alpha}$, macrophage inflammatory protein-$1{\beta}$, eotaxin and interleukin-12 (p40) from COCs in response to RA were detected. Conclusion: We concluded that the maturation of oocytes and $Irf-1$ expression are negatively correlated, and RA enhances the developmental competence of mouse immature oocytes $in$ $vitro$ by suppressing apoptosis of cumulus cells. Using a mouse model, results of the present study provide insights into improved culture conditions for $in$ $vitro$ oocyte maturation and relevant cytokine production and secretion in assisted reproductive technology.

미성숙 암컷 흰쥐 시상하부-뇌하수체 축 상의 유전자 발현에 미치는 Vinclozolin 투여 효과 (Effect of Vinclozolin Administration on the Gene Expressions in Hypothalamus-Pituitary Axis of Immature Female Rats)

  • 이우철;이성호
    • 한국발생생물학회지:발생과생식
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    • 제12권1호
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    • pp.97-105
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    • 2008
  • Vinclozolin (VCZ)은 침투성 살균제로써 과일, 채소, 와인산업에 널리 사용된다. VCZ와 그것의 대사산물들인 butenoic acid (M1)과 enanilide (M2)는 안드로겐 수용체를 놓고 항 안드로겐 물질로 작용한다. VCZ가 수컷의 생식생리와 병리에서 내분비계 장애물질(endocrine disrupting chemical, EDC)로 작용함에 대한 증거는 많이 있지만, 암컷 생식생리에 미치는 VCZ의 효과에 대한 증거는 전무하다. 본 연구자들은 이전 연구에서 VCZ가 미성숙 암컷 흰쥐의 사춘기 개시를 유의하게 지연시킴을 보고한 바 있는데, 이는 VCZ에 의해 시상하부-뇌하수체-난소(hypothalamus-pituitary-ovary, H-P-O) 생식 호르몬 축의 활성이 지연되거나 약화됨을 시사한다. 본 연구에서는 미성숙 암컷 흰쥐들의 VCZ 투여가 암컷 흰쥐의 시상하부-뇌하수체 축의 생식 호르몬 관련 유전자들 활성에 미치는 영향을 조사하였다. VCZ (10 mg/kg/day)를 생후 21일부터 첫 번째 질구개방이 관찰되는 날까지 매일 복강주사하였다. 시상하부와 뇌하수체의 표적 유전자들의 전사적인 변화량을 측정하기 위하여, total RNA를 추출하였고 반 정량적 역전사 중합효소반응(RT-PCR)을 실시하였다. VCZ 투여군에서 시상하부의 gonadotropin-releasing hormone (GnRH)의 분비를 조절함이 알려진 nitric oxide synthase-2 (NOS-2)의 전사활성은 대조군보다 유의하게 감소하였다(p<0.01). 유사하게, VCZ 투여군의 시상하부에서의 KiSS-1, G protein-coupled receptor54 (GPR54) 그리고 GnRH mRNA 수준도 감소하였다(p<0.01). 예상대로, VCZ 투여군의 뇌하수체 luteinizing hormone-${\beta}$ (LH-${\beta}$)과 follicle stimulating hormone-${\beta}$ (FSH-${\beta}$) 전사활성도 대조군에 비하여 유의하게 감소하였다(p<0.01). 이번 연구를 통해 미성숙 암컷 흰쥐의 VCZ 노출시 사춘기 개시의 지연효과는 시상하부-뇌하수체 신경내분비 축의 GnRH와 KiSS-1같은 성선자극호르몬들과 그들의 상위조절인자들의 전사 활성의 감소에 의해 야기되고, 아마도 nitric oxide (NO) 신호전달경로에 의해 조절됨을 시사한다.

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Aspergillus tubingensis에 의한 샤인머스켓 포도송이썩음병(가칭)의 발생 (Occurrence of Bunch Rot Disease Caused by Aspergillus tubingensis on Shine Muscat Grape)

  • 김영수;권혁태;홍승범;전용호
    • 식물병연구
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    • 제25권4호
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    • pp.220-225
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    • 2019
  • 2018년 경북 김천 지역 포도 하우스 재배 농가에서 포도송이가 무르고 마른 포도 과실이 낙과되는 피해가 발생하였다. 병반 표면에는 검갈색의 곰팡이 포자가 형성된 것을 확인할 수 있었으며, 이병과실에서 병원균을 분리하여 균학적 특징 및 염기서열 분석결과 병원균은 Aspergillus tubingensis로 동정하였다. 이 증상의 원인균을 증명하기 위해 이병과실에서 병원균을 분리하여 병원성 검정을 수행한 결과, 고온으로 갈수록 급격히 병이 진전되고 하우스에서 발생한 병징과 일치하였다. 또한, 포도송이 썩음 병원균에 대하여 화학농약 약제의 선발을 통해 병원균의 확산을 막고 예방을 하고자 단제 7종 균사생장 억제 효과 검정을 실시하였다. Dipenoconazole, tebuconazole, metconazole, iminoctadine, captan 5가지의 약제에서 균사생장 억제 효과가 확인되었다. A. tubingensis에 의한 포도송이썩음병(가칭)은 2018년도부터 국내 샤인머스켓 포도에 처음 발생되고 있음을 보고하고, 효과적으로 포도송이썩음병의 발생을 예방할 수 있는 5종의 약제를 보고한다.