• Title/Summary/Keyword: Pseudoxanthomonas sp.

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Characterization of extracellular protease from Pseudoxanthomonas sp. WD12 and WD32 (Pseudoxanthomonas sp. WD12와 WD32의 세포외 단백질분해효소 특성)

  • Cho, Woon-Dong;Oh, Ji-Sung;Roh, Dong-Hyun
    • Journal of Applied Biological Chemistry
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    • v.59 no.4
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    • pp.285-288
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    • 2016
  • Proteolytic enzymes perform hydrolysis of the peptide bonds in the protein and most commonly use in the industry. Pseudoxanthomonas sp. WD12 and WD32 were previously isolated as protease producers from a rotten wood sample. Here, we report the secreted proteolytic enzymes. The optimum enzyme reaction temperature for the secreted crude enzyme from the strain WD12 and WD32 were $50^{\circ}C$ at pH 9.0 and $45^{\circ}C$ at pH 8.0, respectively. The enzyme activities of both strains were increased by addition of KCl, NaCl, $CaCl_2$ or $MnSO_4$, and decreased by addition of $AgNO_3$, $CuSO_4$, $FeCl_3$ or $AlCl_3$. Secreted enzymes of both strains were most strongly inhibited by addition of $FeCl_3$ or $CuSO_4$. Taken together these results, WD12 could be a candidate strain of industrial alkaline protease production.

Isolation of Pseudoxanthomonas sp. W12 and WD32 Producing Extracellular Protease (단백질분해효소를 생산하는 Pseudoxanthomonas sp. WD12와 WD32의 분리)

  • Cho, Woon-Dong;Lee, Je-Kwan;Lim, Chae-Sung;Park, A-Rum;Oh, Yong-Sik;Roh, Dong-Hyun
    • Korean Journal of Microbiology
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    • v.46 no.1
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    • pp.63-67
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    • 2010
  • Proteases catalyze hydrolytic cleavage of a peptide bond between amino acids and occupy pivotal positions in application in physiological and commercial fields. During the screening for novel bacteria producing extracellular protease, two bacterial strains, WD12 and WD32, were isolated from rotten trees and they made clear zone on LB plates supplemented with 1% skim milk. The similarities of 16S rRNA gene sequence of either WD12 or WD32 to GenBank database showed the highest to Pseuoxanthomonas mexicana as 97.8 and 99.8%, respectively. Phylogenetic analysis showed that both isolated was located within the cluster comprising P. mexicana and P. japonesis. WD12 and WD32 were catalase- and oxidase-positive, Gram-negative rod strains. In case of WD12, it could assimilate malate, but could not assimilate D-mannose, which were different characteristics from P. mexicana. Both Pseuoxanthomonas sp. WD12 and WD32 optimally produced extracellular protease at $35-37^{\circ}C$, and maximal activity showed as 656 unit/ml and 267 unit/ml, respectively.

Characteristics and Distribution of Microorganisms in a Rice Straw Compost for Cultivation of Button Mushrooms (Agaricus bisporus) (양송이 재배에서 볏짚 배지의 발효 단계별 관여 미생물의 분포양상 및 특성)

  • Lee, Chan-Jung;Yoo, Young-Mi;Moon, Ji-Won;Cheong, Jong-Chun;Kong, Won-Sik;Kim, Yong-Gyun;Lee, Byung-Eui;Yoon, Min-Ho;Sa, Tong-min
    • The Korean Journal of Mycology
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    • v.45 no.1
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    • pp.43-53
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    • 2017
  • In this study, we analyzed the densities and taxonomic characteristics of various microorganisms that play important roles in Agaricus bisporus culture medium composting, and examined changes in the levels of decomposition-related enzymes secreted by these microorganisms. Various microorganisms such as thermophilic bacteria, actinomycetes, fluorescent Pseudomonas spp., and filamentous bacteria are closely associated with culture medium composts of Agaricus bisporus. The population densities of microorganisms change, and harmful bacteria disappear during thermophilic composting. Psychrobacter sp., Pseudomonas sp., Bacillus sp., and Pseudoxanthomonas sp. accounted for the highest proportion of bacteria in the culture media during outdoor composting, whereas Bacillus sp. and Psychrobacillus sp. were dominant after pasteurization. Cellulose and hemicellulose enzymes of the microorganisms were important at an early stage of rice straw composting and after decomposition of carbon sources, respectively. Microorganisms that secreted these enzymes were present in the second and third turning stage of composting.

Conversion of Ginsenoside Rb1 and Taxonomical Characterization of Stenotrophomonas sp. 4KR4 from Ginseng Rhizosphere Soil (인삼 근권 토양에서 분리한 Stenotrophomonas sp. 4KR4의 Ginsenoside Rb1 전환능 및 분류학적 특성)

  • Jeon, In-Hwa;Cho, Geon-Yeong;Han, Song-Ih;Yoo, Sun Kyun;Whang, Kyung-Sook
    • Korean Journal of Microbiology
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    • v.49 no.4
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    • pp.369-376
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    • 2013
  • We isolated the ${\beta}$-glucosidase producing bacteria (BGB) in ginseng root system (rhizosphere soil, rhizoplane, inside of root). Phylogenetic analysis of the 28 BGB based on the 16S rRNA gene sequences, BGB from rhizosphere soil belong to genus Stenotrophomonas (3 strains), Bacillus (1 strain), and Pseudoxanthomonas (1 strain). BGB isolates from rhizoplane were Stenotrophomonas (16 strains), Streptomyces (1 strain) and Microbacterium (1 strain). BGB from inside of root were categorized into Stenotrophomonas (3 strains) and Lysobacter (2 strains). Especially, Stenotrophomonas comprised the largest portion (approximately 90%) of total isolates and Stenotrophomonas was a dominant group of the ${\beta}$-glucosidase producing bacteria. We selected strain 4KR4, which had high ${\beta}$-glucosidase activity (108.17 unit), could transform ginsenoside Rb1 into Rd, Rg3, and Rh2 ginsenosides. In determining its relationship on the basis of 16S rRNA sequence, 4KR4 strain was most closely related to Stenotrophomonas rhizophila e-$p10^T$ (AJ293463) (99.62%). Therefore, on the basis of these polyphasic taxonomic evidence, the ginsenoside Rb1 converting bacteria 4KR4 was identified as Stenotrophomonas sp. 4KR4 (=KACC 17635).

Biodegradation of PCBs into Contaminated Dredged Sediments (오염퇴적물에 함유된 PCBs의 생물분해 특성)

  • 안재환;김소정;지재성;배우근;황병기
    • Journal of Soil and Groundwater Environment
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    • v.9 no.2
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    • pp.41-47
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    • 2004
  • This research in the degradation of polychlorinated biphenyls(PCB) has focussed on the use of experimental enrichment cultures to obtain PCB-deading communities and identification of PCB-degrading bacteria accor야ng to pure culture. During 180 days, enrichment culture was performed to obtain PCB-degrading bacteria and initial concentration was injected 1.6 ppm,0.7 ppm, respectively. After 180 days of enrichment culture, PCBs was removed 80-87% and 57-71%. Biodegradation of PCBs was studied according to dominated PCB-degrading bacteria. Biodegraddation of PCBs was 80% in initial concentration of PCBs for 20days, enrichment cultured PCB-degrading bacteria was isolated by pure culture and it was verified to Pseudoxanthomonas sp.