• 제목/요약/키워드: Potato virus Y

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Characterization and Partial Nucleotide Sequence of Potato Virus X Isolated from Potato in Korea

  • Jung, Hyo-Won;Yun, Wan-Soo;Seo, Hyo-Won;Hahm, Young-Il;Kim, Kook-Hyung
    • The Plant Pathology Journal
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    • 제16권2호
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    • pp.110-117
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    • 2000
  • Potato virus X (PVX-KO) showing mild mosaic and stunting symptoms on potato (Solanum tuberosum) in Kangwon area has been isolated and characterized. EM observation of the purified virus particles showed flexuous rod shape of about 520 nm in length. The coat protein (CP) of the virus had a molecular weight of 31 kDa in SDS-PAGE analysis, and the viral RNA was approximately 6.4 kb in size in denatured agarose gel electro-phoresis. In gel-immunodiffusion tests, it reacted strongly with an antiserum to common PVX from BIOREABAAG (USA). A rabbit antiserum was produced using purified virus and used for routine PVX detection by ELISA. Cultivated potatoes in Kangwon and other areas were frequently infected with PVX-KO. Both Datura stramonium and Nicotiana tabaccum cultivars developed necrotic local lesions 5 days after inoculation, and systemic mosaic symptoms with vein clearing 2 weeks after inoculation. All the features agree with the description of other PVX strains. To confirm and determine PVX strains, reverse transcription-polymerase chain reaction experiment was conducted using specific primers for viral CP. Amplified DNA fragments were cloned and sequenced. Results showed nucleotide sequence homologies of about 88 to 99% to other PVX strains. Based on CP amino acid sequence deduced from nucleotide sequences and host range studies PVX-KO is considered a member of the type X subgroup of PVX.

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Complete Genome Sequence Analysis of Two Divergent Groups of Sweet potato chlorotic fleck virus Isolates Collected from Korea

  • Kwak, Hae-Ryun;Kim, Jaedeok;Kim, Mikyeong;Seo, Jang-Kyun;Kim, Jeong-Soo;Choi, Hong-Soo
    • The Plant Pathology Journal
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    • 제34권5호
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    • pp.451-457
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    • 2018
  • The Sweet potato chlorotic fleck virus (SPCFV), of the genus Carlavirus (family Betaflexiviridae), was first detected as one of several viruses infecting sweet potatoes (Ipomea batatas L.) in Korea. Out of 154 sweet potato samples collected in 2012 that were showing virus-like symptoms, 47 (31%) were infected with SPCFV, along with other viruses. The complete genome sequences of four SPCFV isolates were determined and analyzed using previously reported genome sequences. The complete genomes were found to contain 9,104-9,108 nucleotides, excluding the poly-A tail, containing six putative open reading frames (ORFs). Further, the SPCFV Korean isolates were divided into two groups (Group I and Group II) by phylogenetic analysis based on the complete nucleotide sequences; Group I and Group II had low nucleotide sequence identities of about 73%. For the first time, we determined the complete genome sequence for the Group II SPCFV isolates. The amino acid sequence identity in coat proteins (CP) between the two groups was over 90%, whereas the amino acid sequence identity in other proteins was less than 80%. In addition, SPCFV Korean isolates had a low amino acid sequence identity (61% CPs and 47% in the nucleotide-binding protein [NaBp] region) to that of Melon yellowing-associated virus (MYaV), a typical Carlavirus.

혈청학적 방법에 의한 고추의 바이러스병 감염상 조사 (Serological Investigation of Virus Diseases of Pepper Plant (Capsicum annum L.) in Korea)

  • 라용준
    • Journal of Plant Biology
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    • 제15권1호
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    • pp.23-27
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    • 1972
  • A total of 163 virus infected pepper plants(Capsicum annuum L.) collected from various pepper growing regions in Korea were investigated on the presence of tobacco mosaic virus (TMV), cucumber mosaic virus (CMV), potato virus X(PVX), potato virus Y(PVY) and alfalfa mosaic virus (AMV) by serological methods. Van Slogteren's microprecipitin test was applied for the testing of TMV, PVX and PVY from infected plants, and Ouchterlony agar double diffusion test was used for CMV and AMV. Results obtained are as follows: 1. TMV, CMV, PVX, PVY and AMV were found to occur on the pepper plants growing in Korea. 2. The prevalence of each of these viruses among the 163 pepper plants investigated was in the order of CMV: 93 plants(57.0%)>TMV: 91 plants (55.8%)>AMV: 58 plants (35.6%)>PVY: 40 plants (24.5%)> PVX:6 plants(3.7%). 3. Among the 163 plants investigated, 72 plants (44%) showed infection with one kind of virus and 91 plants (56%) showed mixed infection with more than two different viruses. In general, heavier damage of the plants was observed from mixed infection. 4. The results of serological identification of pepper viruses coincided with those results obtained by sap inoculation experiment conducted at the Horticultural Experiment Station along with present investigation. Thus the serological techniques applied in this experiment proved to be very reliable for the identification of TMV, CMV, PVX, PVY and AMV from pepper plants infected with these viruses.

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Variation of Potato virus Y Isolated from Potato, Tobacco, Pea and Weeds in Korea on the C-terminal Region of Coat Protein Gene and 3'Non-translated Region

  • Yun, W.S.;Jung, H.W.;Oh, M.H.;Hahm, Y.I.;Kim, K.H.
    • The Plant Pathology Journal
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    • 제18권3호
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    • pp.130-137
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    • 2002
  • Potato virus Y (PVY) is one of the most important viruses in many field crops in Korea. In this study, 31 PVY isolates were isolated from infected potato (Solanum tuberosum), tobacco (Nicotiana tabacum), pea (Pisum sativum), and weeds (Veronica persica, Lamium amplexicause and Capsella bursa-pastoris) showing different mosaic symptoms in Jeonbuk, Chungnam, Gangwon, and Gyeongbuk areas in Korea. The 640 nucleotide region containing the C-terminal portion of coat protein (CP) gene and 3'non-translated region (NTR) was amplified by reverse transcription-polymerase chain reaction (RT-PCR) using PVY-specific oligonucleotide primers. Sequence analyses of the amplified DNA fragments showed that the C-terminal portion of CP gene was not significantly different from that of previously reported PVY strains from potato (PVY-OK and -T) and tobacco (PVY-VN) in Korea. Homologies of the deduced CP amino acid sequences were 93.3-99.0% to corresponding regions of the other PVY strains including PV $Y^{N}$, PV $Y^{o}$ , PV $Y^{OK}$ , PV $Y^{T}$ , and PV $Y^{VN}$ . In contrast the sequences located at the 3'-NTR showed more diverse sequence homologies (76.4-99.7%). These results indicate that the C-terminal portion of the CP gene was relatively conserved while sequences at the 3'NTR were more diverse and variable over the host species and the regions where they were isolated.e isolated.

2011년 한국 연초산지의 병해 발생상황 (Survey of Disease Occurrence in Major Tobacco Fields of Korea, 2011)

  • 전미현;이영근
    • 한국연초학회지
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    • 제33권1호
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    • pp.1-7
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    • 2011
  • Major diseases of tobacco plants were surveyed throughout the Korea in 2011. Mosaic, bacterial wilt and hallow stalk were most severe during the harvest season on not only flue-cured tobacco plants but also burley tobacco plants. On flue-cured tobacco plants, mosaic caused by potato virus Y were more severe than those by tobacco mosaic virus or cucumber mosaic virus. The mosaic caused by potato virus Y was severe at Yeongwol and Chungju. On burley tobacco plants, mosaic were more severe at Jeongeup and Gochang than those at Chungnam and Jeonnam. A negative correlation between the mosaic incidence and the precipitation was recognized. On the other hand, there was a positive correlation between the incidence of hallow stalk incidence of flue-cured tobacco plants in harvesting stage and the precipitation during June was recognized significantly.

Fungi에 의한 식물성 virus의 전파 (Dissemination of plant viruses by fungi)

  • 이미순
    • 미생물학회지
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    • 제9권4호
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    • pp.179-188
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    • 1971
  • There is a good evidence that tabacco necrosis virus, lettuce big vein virus, and tabacoo stunt virus are transmitted by Oplidium brassicae, although absolute proof in aspetic condition is lakcing. Some evidence suggests that polymyxa graminis may be involved in transmission of wheat mosaic virus. One report claims that Synchytrium endobioticum can transmit potato virus X. The cultivated mushroom, Agaricus bisporus, is known to act as a hose of a virus and is apparently involved in the spread of the virus.

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In Viro 전사 RNA Probe를 이용한 식물 바이러스병의 진단 (Detection of Plant RNA Viruses by Hybridization Using In Vitro Transcribed RNA Probes)

  • 최장경;이종희;함영일
    • 한국식물병리학회지
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    • 제11권4호
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    • pp.367-373
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    • 1995
  • The cDNAs derived from the coat protein (CP) genes of six plant RNA viruses, tobacco mosaic virus-pepper strains (TMV-P) and -ordinary strain (TMV-OM), potato virus Y (PVY), turnip mosaic virus (TuMV), cucumber mosaic virus (CMV) and potato leafroll virus (PLRV), were subcloned into the transcription vector, pSPT18, containing SP6 and T7 promoters. The digoxigenin (DIG)-labeled RNA polymerase after linearlization of the cloned pSPTs with XbaI or SacI, and were tested for their sensitivities for the detection of the six viruses. In slot-blot hybridization, dilution end points for the detection of TMV-P and TMV-OM were 10-4, while those of PVY, TuMV and CMV were 10-3. PLRV was detected at the dilution of 10-2. When each RNA probe was applied for the detection of the viruses in the preparations from the leaf disks (8 mm in diameter, and 12 to 15 mg in weight) of infected natural host plants, TMV-P, TMV-OM and TuMV could be detected from one disk, while PVY from 1 or 2 disks. CMV was detected in the preparation from two disks, and PLRV from three disks. With DIG-labeled RNA probe, PVY was detected at 5 days after inoculation, but with ELISA the virus was detected at 8 days after inoculation to tobacco (Nicotiana tabacum cv. Xanthi nc) plants on which symptoms appeared at 9 days after inoculation. No difference was observed in cross reaction between the RNA probes for the detection of TMV-P and TMV-OM.

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Development of RT-PCR Based Method for Detecting Five Non-reported Quarantine Plant Viruses Infecting the Family Cucurbitaceae or Solanaceae

  • Lee, Jong-Seung;Cho, Won-Kyong;Lee, Su-Heon;Choi, Hong-Soo;Kim, Kook-Hyung
    • The Plant Pathology Journal
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    • 제27권1호
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    • pp.93-97
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    • 2011
  • For quarantine purpose, we selected five plant RNA viruses including Cucumber vein yellowing virus (CVYV), Cucurbit yellow stunting disorder virus (CYSDV), Potato aucuba mosaic virus (PAMV), Potato yellow dwarf virus (PYDV), and Tomato chlorosis virus (ToCV), which are not reported in Korea and cause serious economic losses to the family Cucurbitaceae or Solanaceae. To detect those viruses, we employed RT-PCR technique with specific oligonucleotide primer pairs and tested their detection efficiency for each virus. To design RT-PCR primers, coat protein was used for CVYV, CYSDV, and ToCV whereas RNA polymerase and nucleocapsid regions were used for PAMV and PYDV, respectively. The development of an RT-PCR based method proved a useful tool for rapid detection and identification of quarantine virus infections.

감자 이상모자이크증상의 몇 가지 발생원인 및 제초제에 의한 증상 유기 (Several causes of non virus-induced mosaic symptom on potato leaves and its induction by herbicides)

  • 권민;함영일;김현준;임명순
    • 농약과학회지
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    • 제5권2호
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    • pp.45-50
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    • 2001
  • 최근 씨감자 채종지에서 PVX, PVY 감염증상과 유사한 비(非)바이러스성 모자이크증상(Non virus-induced mosaic symptom, NVMS)이 매년 $5{\sim}20%$ 정도 발생하고 있어서 씨감자포장검사원과 농민간에 많은 마찰이 발생하고 있는 실정이다. 본 실험에서는 NVMS의 원인을 구명하고자 의심주와 건전주의 재배적, 병리적, 화학적 분석을 실시하였고, NVMS를 일으키는 원인중의 하나로 생각되는 감자밭 제초제에 대한 약해증상 유기실험을 포장과 실내에서 실시하였다. 이상모자이크 증상주가 심겨진 근권토양의 이화학적 특성 (pH, EC) 및 토양 내 각종 성분(유기물 $P_2O_5$, K, Ca, Mg. $NO_3$) 함량을 분석하여 이상모자이크 발생률과의 상관분석을 실시한 결과 어떠한 상관성도 보이지 않았다. 또한 바이러스항혈청(PVY, PVX)을 이용한 ELISA 검정과 투과(透過)전자현미경(TEM) 검경에서도 어떠한 바이러스 입자도 검출되지 않았다. 지표식물인 Nicotiana tabacum과 N. sylvestrus를 이용한 접종에서도 PVX와 PVY 감염증상이 보이지 않았다. 감자밭용 제초제 처리 결과 Pendimethalin.linuron EC+paraquat SL 처리구에서는 61.1%의 NVMS 발생률을 보였으며, Pendimethalin EC+paraquat SL 처리구에서는 47.2%, Oxadiazon pendimethalin EC+paraquat SL 처리구에서는 19.4%의 발생률을 보였다. 따라서 Pendimethalin 성분이 함유된 제초제 처리가 감자의 NVMS 발생 원인으로 판명되었다. 수량에서는 처리간 유의성을 보이지 않았으나, 다만 Dicamba 처리구에서 무처리 대비 23%의 수량감소가 있었다. 또한 전년도 제초제 처리한 괴경을 파종하여 후대검정한 결과 어떠한 이상모자이크 증상도 관찰되지 않았다.

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