• Title/Summary/Keyword: Plant Species

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Bridging Comparative Genomics and DNA Marker-aided Molecular Breeding

  • Choi, Hong-Kyu;Cook, Douglas R.
    • Korean Journal of Breeding Science
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    • v.43 no.2
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    • pp.103-114
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    • 2011
  • In recent years, genomic resources and information have accumulated at an ever increasing pace, in many plant species, through whole genome sequencing, large scale analysis of transcriptomes, DNA markers and functional studies of individual genes. Well-characterized species within key plant taxa, co-called "model systems", have played a pivotal role in nucleating the accumulation of genomic information and databases, thereby providing the basis for comparative genomic studies. In addition, recent advances to "Next Generation" sequencing technologies have propelled a new wave of genomics, enabling rapid, low cost analysis of numerous genomes, and the accumulation of genetic diversity data for large numbers of accessions within individual species. The resulting wealth of genomic information provides an opportunity to discern evolutionary processes that have impacted genome structure and the function of genes, using the tools of comparative analysis. Comparative genomics provides a platform to translate information from model species to crops, and to relate knowledge of genome function among crop species. Ultimately, the resulting knowledge will accelerate the development of more efficient breeding strategies through the identification of trait-associated orthologous genes and next generation functional gene-based markers.

First record of Hedyotis chrysotricha (Rubiaceae) from Korea (우리나라 미기록 자생식물: 영암풀(꼭두선이과))

  • Na, Hye Ryun;Hyun, Jin-Oh
    • Korean Journal of Plant Taxonomy
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    • v.46 no.4
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    • pp.420-423
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    • 2016
  • This is a report of an unrecorded species of Hedyotis from Korea, Hedyotis chrysotricha (Palib.) Merr., found in Yeongam-gun, Jeollanam-do. The species can be distinguished from other Hedyotis species by trichomes that cover the entire plant, ovate leaves, mauve or white corolla, and the corolla lobe of which the length measures more than twice its width. The species was named after its findspot and is hence called 'Yeongam-pul.' An illustration, description and key to the taxa related to Hedyotis are provided.

The Report on the Taxonomic Characters, Ecological Risk and Weed Risk Assessment of Putative Invasive Alien Plants which are Designated in Law by the Ministry of Environment in Korea as Environmentally Harmful Species (IV)

  • Hyun, Jong Young;Yoon, Chang Young;Kim, Joo-Hwan
    • Korean Journal of Plant Resources
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    • v.34 no.6
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    • pp.616-632
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    • 2021
  • We performed taxonomic reviews and habitat circumstances survey for 41 un-introduced environmentally harmful plants (as designated by the Ministry of Environment, Korea in 2016). And we investigated plant specimens from several herbaria and performed a field survey in the southeastern region of the United States. Based on the result, we presented the most comprehensive results of weed risk evaluation and taxonomic description up to now as well as classification keys for 11 species to apply the regulation management of putative invasive alien species - Senecio madagascariensis Poir., Sphagneticola trilobata (L.) Pruski, Ageratina riparia (Regel) R.M. King & H. Rob. (Asteraceae), Andropogon gayanus Kunth (Poaceae), Echinocystis lobata (Michx.) Torr. & A. Gray (Cucurbitaceae), Salvinia minima Baker (Salviniaceae), Vincetoxicum rossicum (Kleopow) Barbar. (Asclepiadaceae), Asparagus asparagoides (L.) Druce (Asparagaceae), Alternanthera pungens Kunth (Amaranthaceae), Salpichroa origanifolia (Lam.) Thell., and Lycium ferocissimum Miers (Solanaceae).

Mycorrhization of Quercus spp. with Tuber huidongense and T. himalayense Collected in Korea

  • Gwon, Ju-Hui;Park, Hyeok;Eom, Ahn-Heum
    • Mycobiology
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    • v.50 no.2
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    • pp.104-109
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    • 2022
  • Fungi of the genus Tuber are ectomycorrhizal fungi that form a symbiotic relationship mainly with oak and hazel trees. Tuber spp. exhibit a highly selective host plant preference; thus, for cultivation purposes it is important to select an appropriate host plant for successful mycorrhization. In addition, as mycorrhizal characteristics differ according to Tuber spp., it is necessary to understand the differences in mycorrhizae according to the fungal species. Tuber huidongense and Tuber himalayense were recently discovered in Korea; therefore, we used spore suspensions from these two species to inoculate two species of oak trees, Quercus acutissima and Quercus dentata, to compare colonization rates and morphologies of the mycorrhizae. The colonization rates demonstrated that the different Tuber spp. favored different host plant species. In addition, unique morphological and anatomical characteristics were observed for T. huidongense and T. himalayense depending on the host species. These findings can lead to new economically important agricultural activities related to truffle cultivation in Korea.

Survey on Wild Edible Plant Resources in Korea and Its Germination Characteristics (우리나라 야생식용 자원식물의 종류 및 발아 특성에 관한 연구)

  • 강병화;심상인;이상각;박수현
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.42 no.2
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    • pp.236-246
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    • 1997
  • This study was conducted to obtain the basic information of edible resources among plant species. Potentials of resource plants were important in various usages, healthy food, medicinal materials, and breeding materials. Through our investigation 609 species of resources plants were considered as edible resources. These species belong to 74 families in which Asteraceae, Poaceae, Fabaceae, and Rosaceae were major families. Brassicaceae, Liliaceae, and Asteraceae contained large numbers of edible plants because plants belonged to these families were mainly used as vegetable. But Cyperaceae and Poaceae had relatively small numbers of species in the category of edible plant because plants belonged to these families have not been used directly as vegetables, common usage of edible plant. But Poaceae have a potentials as genetic donor for resistance-breeding strategies in major cereals. Although Poaceae can not be used as food directly, Poaceae should be investigated intensely in future for improvement of major cereals or application as fodder plants. The beneficial traits of edible plants as breeding materials have not been studied yet and development of new crop from plant resources requires the information about current situation in occurrence of resources plants genetically related to current crop species. Our results do not cover all plant species in Korea but this classification and identification about edible resources will provide primary information about plant resources. The collected seeds of resource plants showed wide spectrum in germination rate among plant species. The germination rate would probably be affected by collecting times, collected stage, and stored period. The proper methods about improving germination rate have to be elucidated to propagate the resource plants.

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Vascular Plants of Hak Reservoir Valley in Korea DMZ Area (DMZ 인근 학저수지 유역의 관속식물상)

  • Shin, Hyun Tak;An, Jong Bin;Kim, Sang Jun;Heo, Tae Im;Kwon, Yeong Han;Lee, Yoon Young;Yoon, Jung Won
    • Korean Journal of Plant Resources
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    • v.28 no.4
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    • pp.475-486
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    • 2015
  • This survey was conducted in order to investigate the vascular plants of Hak Reservoir Valley in the DMZ Area, Korea. The vascular plants were collected six times (from April 2014 to November 2014) and consisted a total of 238 taxa; 69 families, 172 genera, 206 species, 2 subspecies, 26 varieties and 4 forms. The observed rare plant species as designated by Korea Forest Service were 3 taxa including Carex capricornis Meinsh. ex Maxim., Acorus calamus L., Penthorum chinense Pursh. Endemic plant species were 2 taxa including Salix koriyanagi Kimura, Clematis brachyura Maxim. 17 taxa were listed as specific plant species based on phytogeographical in the investigated area. 25 taxa were recorded as naturalized plants, and their Naturalization Ratio and Urbanization Index were recorded as 10.46%, and 7.78%, respectively. Of the 238 taxa listed; 105 were pasturing plants, 92 edible plants, 76 medicinal plants, 24 ornamental plants, 6 stain plants, 4 timber plants, 2 fiber plants, 2 industrial plants and 55 unknown plants.

Comparison of Fish Species Composition by Trammel Net at the Intake and Discharge of Weolseong Nuclear Power Plant (월성원자력발전소 취수구 및 배수구에서 삼중자망으로 채집된 어류의 종조성 비교)

  • Ryu, Jung-Hwa;Yoo, Jae Myung;Kim, Jin-Koo
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.49 no.6
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    • pp.883-888
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    • 2016
  • We investigated fish species composition seasonally at the intake and discharge of Weolseong Nuclear Power Plant (WS-NPP) from February to November 2008 using a trammel net. At the intake, 121 individuals belonging to 28 species were collected, and 157 fish from 34 species were sampled at the WS-NPP discharge. Dominant species at the intake were Chelidonichthys spinosus (17.2%), Scomber japonicus (11.5%) and Ditrema temminckii (8.2%) at the intake, while Sillago japonica (18.5%), Chelidonichthys spinosus (13.4%) and Konosirus punctatus (8.3%) dominated at the discharge. The species count and diversity index at the discharge were highest during winter, whereas those at the intake were highest during spring, perhaps due to warm seawater at the discharge site. This study is the first to reveal an effect of effluent water on the aggregation of warm water fish species during winter.

Genetic Variation and Conservation of the Endangered Species Cotoneaster wilsonii (Rosaceae) from Ulleung Island

  • Park, Jiwon;Lee, Junsoo;So, Soonku;Kim, Muyeol
    • Korean Journal of Plant Taxonomy
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    • v.39 no.3
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    • pp.125-129
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    • 2009
  • The genetic diversity plays a significant role in determining a species' survival and perseverance. Endangered species often lack genetic variation, which makes them vulnerable to numerous dangers of extinction including selection, genetic drifts and human interference. Knowing an endangered species' genetic background greatly enhances conservation efforts since it reveals why, what and how to conserve that species. Cotoneaster wilsonii is an endangered plant species endemic to Ulleung island, but not enough genetic research has been done on this taxon for its effective conservation plans. In this study, three populations of C. wilsonii in Ulleung island underwent allozyme analysis through starch gel electrophoresis. 10 loci were analyzed and F-statistics was calculated. Overall data indicated that C. wilsonii possessed low genetic diversity with intense inbreeding, heterozygote deficiency and low differentiation among populations. These results implied that C. wilsonii was recently introduced to the Ulleung island from ancestor species, and did not have much time to differentiate. Current status of C. wilsonii habitats is very fragile and vulnerable, with increasing tourism constantly threatening the species' survival. It is very likely that C. wilsonii will become extinct in near future unless organized conservation protects its populations and genetic diversity.

Quantitative analysis of massonianoside B in Pinus species using HPLC/PDA

  • Gia Han Tran;Jungwon Choi;Hee Jeong Min;Ja Jung Ku;Sanghyun Lee
    • Journal of Applied Biological Chemistry
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    • v.66
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    • pp.153-158
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    • 2023
  • Pinus species are native to the Northern Hemisphere and some parts of the tropics to temperate regions in the Southern Hemisphere. They were used as food and medicine in prehistoric times. Massonianoside B is a compound found in pine trees and possesses antioxidant activity. In order to determine the presence and content of this compound in Pinus species, three different parts (needles, branches, and bark) of three Pinus species were extracted and investigated. High-performance liquid chromatography with a gradient elution system along with a reverse-phase INNO column with photodiode array detector was employed. Results showed that the branches of the three Pinus species had higher massonianoside B content (5.502 to 9.751 mg/g DW) than either the needles or bark. Furthermore, among the three species, P. rigida × P. taeda had the highest concentration of total massonianoside B (11.557 mg/g DW). These findings thus provide evidence of biological activity in Pinus species and establish a foundation for further research.

Cryopreservation of Mulberry Germplasm Core Collection and Assessment of Genetic Stability through ISSR Markers

  • Rao, A. Ananda;Chaudhury, Rekha;Kumar, Suseel;Velu, D.;Saraswat, R.P.;Kamble, C.K.
    • International Journal of Industrial Entomology and Biomaterials
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    • v.15 no.1
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    • pp.23-33
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    • 2007
  • A simple and reliable cryo technique using desiccation and slow freezing of winter dormant buds was employed for 238 core collection of mulberry germplasm collected from diverse geographical regions and maintained under tropical conditions in the ex situ field gene bank to develop long-term biodiversity conservation for ensuring sustainable utilization of these valuable resources. Desiccation and freezing tolerance of bud grafts and excised shoot apices in the axillary buds of different Morus species under in vivo and in vitro condition indicated species-specific variation and most of the wild Morus species were found sensitive. In vitro regeneration and cryopreservation($-196^{\circ}C$) protocols using differentiated bud meristem like axillary winter dormant buds were worked out for a wide range of Morus species, land races, wild and cultivated varieties. Successful cryopreservation of mulberry winter dormant buds of different accessions belonging to M. indica, M. alba, M. latifolia, M. cathayana, M. laevigata, M. nigra, M. australis, M. bombycis, M. sinensis, M multicaulis and M. rotundiloba was achieved. Among wild species Morus tiliaefolia, and M. serrata showed moderate recovery after cryopreservation. Survival rates did not alter after three years of cryopreservation of different Morus species. ISSR markers were used to ascertain the genetic stability of cryopreserved mulberry, which showed no difference detected among the plantlets regenerated from frozen apices in comparison to the non-frozen material.