• Mycobiology
• /
• 제40권1호
• /
• pp.59-65
• /
• 2012

Antagonistic microorganisms against $Rhizoctonia$ $solani$ were isolated and their antifungal activities were investigated. Two hundred sixteen bacterial isolates were isolated from various soil samples and 19 isolates were found to antagonize the selected plant pathogenic fungi with varying degrees. Among them, isolate C9 was selected as an antagonistic microorganism with potential for use in further studies. Treatment with the selected isolate C9 resulted in significantly reduced incidence of stem-segment colonization by $R.$ $solani$ AG2-2(IV) in Zoysia grass and enhanced growth of grass. Through its biochemical, physiological, and 16S rDNA characteristics, the selected bacterium was identified as $Bacillus$ $subtilis$ subsp. $subtilis$. Mannitol (1%) and soytone (1%) were found to be the best carbon and nitrogen sources, respectively, for use in antibiotic production. An antibiotic compound, designated as DG4, was separated and purified from ethyl acetate extract of the culture broth of isolate C9. On the basis of spectral data, including proton nuclear magneric resonance ($^1H$ NMR), carbon nuclear magneric resonance ($^{13}C$ NMR), and mass analyses, its chemical structure was established as a stereoisomer of acetylbutanediol. Application of the ethyl acetate extract of isolate C9 to several plant pathogens resulted in dose-dependent inhibition. Treatment with the purified compound (an isomer of acetylbuanediol) resulted in significantly inhibited growth of tested pathogens. The cell free culture supernatant of isolate C9 showed a chitinase effect on chitin medium. Results from the present study demonstrated the significant potential of the purified compound from isolate C9 for use as a biocontrol agent as well as a plant growth promoter with the ability to trigger induced systemic resistance of plants.

• 한국식품과학회지
• /
• 제35권1호
• /
• pp.97-102
• /
• 2003

Cook-chill 제품의 원료로 사용하는 시금치와 수세한 시금치에 대해 Aeromonas hydrophila, Escherichia coli O157:H7, Plesiomonas shigelloides, Pseudomonas aeruginosa, Salmonella spp., Shigella spp., Yersinia enterocolitica, Bacillus cereus, Campylococcus spp., Clostridium perfringens, Listeria monocytogenes, Staphylococcus aureus 등 12종류의 병원성세균의 존재 여부를 확인하였다. 이들 시금치로부터 4종의 병원성세균을 분리하여 API kit와 ATB 자동 동정기를 포함한 형태학적 및 생화학적 방법에 의해 동정하였다. MacConkey agar에서 분리된 균은 그람 음성 간균으로 glucose를 이용하여 gas를 생성하며, lactose 음성, sucrose 양성, lysine 양성으로 ATP system에서 A. hydrophila 종에 대해 99.9%의 상동성을 보였다. Cereus Selective agar에서 분리된 균은 그람 양성 간균, 포자 형성균으로 catalase 양성, mannitol 음성, lecithinase 양성, Simmon's citrate 음성, $NO_2$ 생성 양성, arginine 양성균으로 ATB system에서 B. cereus 종에 대해 99.8%의 상동성을 보였다. Clostridium Perfringens agar에서 분리된 균은 그람 양성 간균, 혐기성균으로 포자를 형성하며, mannitol 양성, lecithinase 양성으로 ATB system에서 C. perfringens 종에 대해 99.9%의 상동성을 보였다. Baird-Parker agar에서 분리된 균주는 그람 양성 구균으로 mannitol, lecithinase, lactose, clumping factor, coagulase 및 hemolysin 양성, xylose 음성으로 ATB system에서 S. aureus 종에 대해 97.8%의 상동성을 보였다. Salmonella spp., E. coli O157:H7, Y. enterocolitica를 포함한 다른 병원성세균은 분리되지 않았다. 시금치에서 분리한 S. aureus 5균주 중 2균주는 SET-RPLA kit에서 enterotoxin type A를 생성하였고 3균주는 enterotoxin을 생성하지 않았다. B. cereus 5균주는 CRET-RPLA kit에서 모두 enterotoxin을 생성하였다.

• Journal of Microbiology and Biotechnology
• /
• 제10권4호
• /
• pp.435-440
• /
• 2000

A pathogenic fungus causing balloon flower root rot (Platycodon grandiflorum) was isolated from naturally infected roots. The microbial characteristics of the isolated microorganism were similar to those of Rhizoctonia solani. About 500 bacterial species from field soils were screened for a biological agent against the above-mentioned putative pathogen, and several bacteria with the antifungal activity were isolated. Among them, the isolated JS2 was identified as Pseudomonas aeruginosa. This strain showed a broad spectrum of antifungal activity potentially. When the antifungal substance was purified from a broth culture of JS2, it was identified as 2,4-diacetylphloroglucinol (Phl).

• 한국환경보건학회지
• /
• 제34권5호
• /
• pp.369-373
• /
• 2008

The indoor environment is an important source of exposure to various aeroallergens and pathogenic microorganism. It has been shown that exposure to aeroallergens enhances the risk of indoor inhabitants developing asthma. Since the skin prick test, a typical clinical method for identification of subjects positive to allergens, can rarely cause fatal or non-fatal reactions in susceptible persons, an in vitro assay such as ELISA using serum has been considered for testing positivity against various allergens. We evaluated the validity of a serum ELISA kit for screening positive subjects to major aeroallergens including Dermatophagoides farinae, Dermatophagoides pteronyssinus, cockroach, Alternaria, Cladosporium, Aspergillus, Penicillium, dog hair, cat fur, mugwort, and ragweed. The ELISA results were compared with the skin prick test results, and sensitivity, specificity, and overall accuracy were calculated to each allergen. Higher sensitivities were obtained from D. farinae, (77.8%) and D. pteronyssinus (69.2%), but sensitivities to Aspergillus, Penicillium, dog hair, cat fur, and ragweed were very low down to 0%. Specificity ranged from 88.7% (cat fur) to 100% (mugwort and ragweed). Overall the accuracy of the serum ELISA kit was relatively high, in that the lowest was 85.1% for cat fur and the highest was 98.6% for Alternaria, Cladosporium, and ragweed. Considering specificity and overall accuracy for the serum ELISA kit, it may be considered reliable. However, when the kit is used for screening purpose, positivity to aeroallergens should be carefully determined since sensitivity for the kit is low.

• 한국지역사회생활과학회지
• /
• 제18권2호
• /
• pp.241-246
• /
• 2007

This study was conducted to select and screen for an antifungal bacterial strain showing pathogen inhibitory activity against Diaporthe actinidiae, which causes stem-end rot in kiwi fruit. Four bacterial strains were isolated which strongly inhibit Diaporthe actinidiae from among two hundred and fifty bacterial strains screened from the soil where kiwi fruit were grown. By co-culturing bacterial strain #72 and the pathogen causing the stem-end rot of kiwi fruit, bacterial strain #72 showed 81.0% antifungal activity against Diaporthe actinidiae. Bacterial strain #72 was identified to be from the genus Bacillus sp. based on morphological and biochemical characterization. The bacterialization of culture broth for Bacillus sp. #72 which was sterilized at $121^{\circ}C$ for 15 minutes and than purified by $0.45{\mu}m$ membrane filter showed almost all of the antagonistic activity against Diaporthe actinidiae. We have also confirmed that in vitro treatment of Bacillus sp. #72 cultured in SD+B+P(sugar 5%, soy sauce 3%, beef extract 0.2%, peptone 0.2%) medium efficiently inhibited the growth of Diaporthe actinidiae responsible for stem-end rot in kiwi fruit.

• 미생물학회지
• /
• 제46권2호
• /
• pp.152-156
• /
• 2010

연성 콘택트렌즈 종류의 하나인 일회용 렌즈는 사용상 편리함을 주는 반면 다양한 안과적 감염성 질환을 초래한다. 안 질환을 유발하는 미생물로는 Acanthamoeba, Bacteria, Fungi 등이 있다. 렌즈 착용시 손을 이용함으로 다양한 미생물 오염은 근절이 불가피한 실정이다. 다양한 미생물의 오염으로 인해 감염성 각막염을 유발하나 정확한 미생물 동정은 미비한 상태이다. 이런 이유로 렌즈를 세척하기 위해 흔히 사용하는 식염수와 ReNu Solution (Bausch and Lomb Company, USA)의 2그룹으로 나누고 식염수와 ReNu Solution을 사용하여 1, 3, 5 10 그리고 15일에 따라 미생물 오염의 정도를 살펴보고 분리되는 미생물을 동정하고자 하였다. 대구시 D대학 안경광학과 재학생들의 안과적 건강상태를 조사한 후 그룹별 10명씩 지정하였다. 일일 착용렌즈를 1일, 3일, 5일 10일, 그리고 15일에 따라 사용 후 배지에서 세균을 배양하였다. 배양된 집락을 선택하여 그람 염색한 결과, Gram-positive cocci 33%, Gram-negative cocci 2%, Gram-positive bacilli 34%, 그리고 Gram-negative bacilli 31%로 나타냈고 이러한 세균을 동정하기 위해 API kit와 VITEK system을 이용하였다. 그 결과 콘택트렌즈의 착용에 의해 유발되는 각막염의 원인세균으로 알려진 S. aureus, P. aeruginosa 등이 분리되었다. 본 연구에서는 연성렌즈의 하나인 일일 착용렌즈의 착용시 세척액에 따른 일반세균의 분포와 일회용 렌즈의 연속 착용에 따른 병원성 세균을 조사함으로 콘택트렌즈의 사용시 위생의 필요성을 시사한다.

• 한국환경과학회지
• /
• 제29권5호
• /
• pp.435-443
• /
• 2020

The purpose of this study was to investigate eco-friendly measures to manage major diseases which cause heavy economic damages to ginseng. Morphological, physicochemical, and molecular biological species identification was carried out after isolating useful antagonistic bacteria from ginseng fields. In addition, optimal conditions for mass culture were established, and he efficacy of the bacteria in the prevention of the diseases was verified in the field. The results showed that about 150 bacteria were extracted from 150 ginseng fields in the whole county. Among them, B. pyrrocinia LA101 was finally selected, which had a strong antagonistic potency against Alternaria panax, Botrytis cinerea, Rhizoctonia solani, and Cylindrocarpon destructans on agar media. The B. pyrrocinia LA101 is a baculiform gram-negative bacterium identified as Burkholderia pyrrocinia according to results from an API(Analytical Profile Index) kit, 16S rRNA, and gyrase gene sequencing analysis. It was donated to the microbe bank of the Agricultural Genetic Resources Center at the National Academy of Agriculture Science under the Rural Development Administration on September 28, 2011 (Donation No. KACC91663P). A patent for the mass culture technology was granted in August 2012 (Patent No. 10-1175532).

• 대한임상검사과학회지
• /
• 제55권4호
• /
• pp.244-252
• /
• 2023

검사 결과의 적시성과 정확성은 임상의가 특히 생명을 위협하는 감염이나 시력과 같은 중요한 장기 및 기능이 위험에 처한 경우, 효과적이고 표적화된 항균 요법을 결정하고 즉시 시행하는데 중요한 요소이다. 가능한 한 최단 시간 내에 정확하고 신뢰할 수 있는 결과를 얻기 위해 matrix assisted laser desorption/ionization time-of-flight (MALDI-TOF) 질량분석기기반 분석을 개선하고 최적화하기 위한 추가 연구 노력이 이루어져야 할 것이다. MALDI-TOF 질량분석기기반 세균 식별은 주로 임상 시료에서 병원체를 분리 및 정제하는 기술, 스펙트럼 라이브러리 확장 및 소프트웨어의 업그레이드에 중점을 둔다. 기술이 발전함에 따라 많은 MALDI-TOF 기반 미생물 동정 데이터베이스 및 시스템이 허가되어 임상에 사용되고 있다. 그럼에도 불구하고, 포괄적인 임상미생물의 특성화를 위해서는 MALDI-TOF 질량분석기 기반 항균제 내성 분석을 개발하는 것이 여전히 필요하다. 특정 적용 범주, 일반적인 분석물질, 주요 수행방법, 한계 및 해결점을 포함하여 임상 연구에서 MALDI-TOF의 적용이 중요하다. 임상 미생물 검사실에서 업무 활용을 위해 임상병리사들의 교육 및 훈련을 통한 전문성 확보가 필수적이며, 데이터베이스 구축과 경험을 극대화하여야 할 것이다. 향후 더 강력한 데이터베이스의 활용으로 다양한 분야에서 MALDI-TOF 질량분석기가 적용될 것으로 보인다.

• 과학수사학회지
• /
• 제11권3호
• /
• pp.210-217
• /
• 2017

법미생물 검사실에서는 식품의 미생물 분석이 요구되는 경우들이 있다. 국립과학수사연구원에 식품 미생물분석이 의뢰된 샘플들 중에서 Bacillus cereus 균이 분리되었던 일부 증례가 있었다. B. cereus는 식중독을 일으킬 수 있는 중요한 병원성 세균이다. 따라서 우리는 최근 미생물 검사를 위해 의뢰된 멸치액젓에서 B. cereus를 분리한 후, 16S rDNA 서열을 기반으로 하는 MSId 방법 및 real-time PCR 법에 따라 균을 동정 하였다. 또한 설사 독소 유전자 및 구토 독소 유전자 검출을 위한 PCR을 실시하고 B. cereus 분리 균주에서 nheABC, bceT 및 entFM 설사 독소 유전자의 존재를 확인하였다. 임상적으로 중요한 몇 가지 식중독 세균들은 식품 미생물 검사 시 주목해야 할 필요가 있다. 특히, 이러한 식중독 세균들 중에서 B. cereus는 환경저항성 및 내열성이 강한 내생포자를 형성하고, 내열성 독소를 형성할 수도 있기 때문에 조리된 음식을 섭취해도 식중독을 일으킬 수 있다. 본 연구를 통해서 B. cereus등의 임상적으로 중요한 세균을 구별하는 것이 식품미생물 검사 시 중요함을 강조하고, 또한 법미생물 검사실에 앞으로 의뢰될 식품미생물 분석 사례들을 위해 B. cereus의 식별 및 세균의 독소 유전자 검출을 위한 지침을 제공 하고자 한다.

• 한국환경보건학회지
• /
• 제50권2호
• /
• pp.102-112
• /
• 2024

Background: Despite the rise in the number of domestic indoor climbing gyms, there is a lack of specific hygiene standards and research on the holds installed in them. Holds can act as vectors for microbial transmission through the hands, posing a risk of infectious diseases, especially with damaged skin. Objectives: The aim of this study is to investigate the contamination level and species of microorganisms on holds according to the management methods practiced in indoor climbing gyms and identify effective strategies for reducing microbial contamination. Methods: We investigated factors that may influence microbial contamination of holds, including hold management methods, user information, and hygiene management at three climbing gyms in Seoul. A total of 72 holds were sampled, 18 for each management method of brushing, high-pressure washing, and ethanol disinfection. Samples were cultured on LB and blood agar at 37℃ for 48 hours to calculate CFUs. PCR assay targeting 16S rRNA was carried out to identify microorganisms. Dunn-Bonferroni was employed to see the microbial reduction effect of the management method and the difference in microbial contamination by management method and climbing gym. Results: As a result of microbial identification, microorganisms such as Bacillus, Staphylococcus, and Micrococcus, which were derived from various environments such as skin and soil, were discovered on the surface of the climbing hold. Among the discovered microorganisms, some species had potential pathogenic properties that could cause food poisoning, gastrointestinal disease, bacteremia, and sepsis. All hold management methods were effective in reducing microorganisms (p<0.05), with ethanol disinfection being the most effective (p<0.001). Conclusions: Our results indicate that there are potential pathogens on holds that demand thorough management for microbial prevention. Proposed methods include regular brushing and ethanol disinfection in addition to high-pressure washing with long cycles, which are the existing forms of hold management. Further studies on shoe management are advised to curb soil-derived microorganisms.