• 아동학회지
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• 제26권6호
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• pp.217-236
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• 2005

The purpose of this study was to investigate whether preschoolers' peer interaction type and level differ depending on pair compositon and task type. Preschoolers' peer interaction type and level were compared among three kinds of pair compositions(with a Younger peer, with a same-age peer, and with an older peer) as well as between two types of tasks(tasks involving real objects, and tasks involving pictures). Subjects were seventy-eight four-year-old children recruited from six child-care centers in Seoul and Gyeonggi Province. The preschoolers were randomly assigned to one of the three kinds of pair compositions. Interaction processes of the pairs were recorded by a video camera, and the scenes were transcribed for content analyses. The traniscribed peer interactions were coded according to the categories that the researcher had generated. Statistical methods used for the data analysis were frequencies, percentiles, means, standard deviations, repeated measures ANOVA, paired t-tests, one-way ANOVA. Major findings of this study were as follows: There were significant differences preschoolers' in interaction type depending on the pair compositions and the types of tasks. The preschoolers paired with the older peer used abstract collaborative explanations more frequently than in two other types of pair composition. The preschoolers paired with the younger peer used explanations without collaboration and parallel behaviors more frequently than in two other types of pair composition.

• Journal of Photoscience
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• 제8권1호
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• pp.33-37
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• 2001

Picosecond absorption spectroscopy has been employed in the study of the solvent dynamics of 1, 2, 4, 5-tetracyanobenzene/biphenyl derivative radical ion pairs, and the resulting rates of radical ion pair separation are faster in acetonitrile than in dichloromethane. In an effort to account quantitatively for such solvent effect on the rate of radical ion pair separation, an equation for the rate of radical ion pair separation is introduced, in which the rate depends exponentially on the electrostatic interaction energy in the radical ion pair. In our analysis of the types of electrostatic interaction energy based on the conducting spheres in dielectric continuum was chosen, and the rate equation employing this electrostatic energy provided information on the distance on the distance of radical ion pair separation and solvation energy of the radical ion pair, thereby providing quantitative explanation for the observed solvent effect on the rate of radical ion pair sepaaration.

• 한국정보과학회논문지:소프트웨어및응용
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• 제36권10호
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• pp.851-860
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• 2009

최근 계산을 통한 단백질 상호작용 예측 기법 중, 단백질 쌍이 포함하고 있는 도메인들 사이의 관계에 중점을 둔 도메인 정보 기반 예측 기법들이 다양하게 제안되고 있다. 하지만, 다수의 도메인 쌍들이 상호작용에 기여하는 정도를 정밀하게 반영하는 계산 기법은 드문 실정이다. 본 논문에서는 단백질 상호작용에 있어 도메인 조합 쌍의 상호작용 영향력을 수치화하여 반영한 상호작용 중요도 행렬을 고안하고 이를 기반으로 한 단백질 상호작용 예측 시스템을 구현한다. 일반적인 도메인 조합 기법과 달리, 상호작용 중요도 행렬에서는 상호작용을 위한 도메인간의 협업 확률이 고려된 Weighted 도메인 조합과, 다수의 Weighted 도메인 조합 중 실제 상호작용 주체가 될 확률을 도메인 조합 쌍의 힘(Domain Combination Pair Power, DCPPW)으로 수치화한다. DIP과 IntAct에서 얻어온 S. cerevisiae의 단백질 상호작용 데이터와 Pfam-A 도메인 정보를 사용한 정확도 검증 결과, 평균 63%의 민감도와 94%의 특이도를 확인하였으며, 학습집단의 증가에 따른 안정적인 예측 정확도 향상을 보였다. 본 논문에서 구현한 예측 시스템과 학습 데이터는 웹(http://code.google.com/p/prespi)을 통하여 내려 받을 수 있다.

• 한국정보과학회논문지:컴퓨팅의 실제 및 레터
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• 제10권4호
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• pp.299-308
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• 2004

최근 단백질 및 도메인과 관련된 방대한 양의 데이타들이 인터넷상에 공표되고 축적됨에 따라, 단백질간의 상호작용에 대한 예측 시스템의 필요성이 제기되고 있다. 본 논문에서는 이러한 데이타를 이용하여 계산적으로 도메인 조합 쌍에 기반하여 단백질의 상호작용 확률을 예측하는 새로운 단백질 상호작용 예측 시스템을 제안한다. 제안된 예측 시스템에서는 기존의 도메인 쌍(domain pair)의 제약성을 극복하기 위하여 도메인 조합(domain combination)과 도메인 조합 쌍(domain combination pair)의 개념이 새롭게 도입하였다. 그리고 도메인 조합 쌍(domain combination pair 또는 dc-pair)을 단백질 상호작용의 기본 단위로 간주하고 예측을 시도한다. 예측 시스템은 크게 예측 준비 과정과 서비스 과정으로 구성되어 있다. 예측 준비 과정에서는 상호작용이 있는 것으로 알려진 단백질 쌍 집합과 상호작용이 없는 것으로 추정되는 단백질 도메인 쌍 집합으로부터 각각 도메인 조합 정보와 그 출현 빈도를 추출한다. 추출된 정보들은 출현 확률 배열(Appearance Probability Matrix 또는 AP matrix)로 불리는 배열 구조에 저장된다. 논문에서는 출현 확률 배열에 기반을 두어, 단백질-단백질 상호작용을 예측하는 확률식 PIP(Primary Interaction Probability)를 고안하고, 고안된 확률식을 이용하여, 상호작용이 있는 것으로 알려진 단백질 쌍 집합과 상호작용이 없는 것으로 추정되는 단백질 도메인 쌍 집합의 확률 값 분포를 생성시킨다. 예측서비스 과정에서는 예측 준비 과정에서 얻어진 분포와 확률식을 이용하여 임의의 단백질 쌍의 상호작용 확률을 계산한다. 예측 모델의 유효성은 효모(yeast)에서 상호작용이 있는 것으로 보고된 단백질 쌍 집합과 상호작용이 없는 것으로 추정되는 단백질 쌍 집합을 이용하여 검증하였다. DIP(Database of Inter-acting Proteins)의 상호작용이 있는 것으로 알려진 효모 단백질 쌍 집합의 80%를 학습 집단으로 사용했을 때, 86%의 sensitivity와 56%의 specificity를 나타내어, 도메인을 기반으로 한 기존의 예측 시스템에 비해서 우월한 예측 정확도를 보여주었다. 이와 같은 예측 정확도의 개선은 본 예측 시스템이 상호작용의 기본 단위로 dc-pair를 채택한 점과 분류를 위하여 새롭게 고안하여 사용한 PIP식이 유효했던 것으로 판단된다.

• 천문학회보
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• 제39권1호
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• pp.44.1-44.1
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• 2014

Blue Compact Dwarf galaxies (BCDs) are systems that recently have experienced the burst of star formation. As one of the causes for active star formation in BCDs, tidal interaction (fly-by or merger) has been suggested. A pair of BCDs, ESO 435-IG20 and ESO 435-IG16 are separated by only ~80 kpc in projection at a similar redshift (at a ~9 Mpc distance), and hence suspected to be a good example of such case. Intergalactic atomic hydrogen gas found in HIPASS survey is also suggestive of this hypothesis. In this study, we probe the HI morphology and kinematics of this BCD pair using ATCA HI data to study detailed interaction history. We investigate various star formation tracers of the pair to study how responsible tidal interaction is for triggering star formation in these galaxies.

• 한국생물정보학회:학술대회논문집
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• 한국생물정보시스템생물학회 2003년도 제2차 연례학술대회 발표논문집
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• pp.7-16
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• 2003

In this paper, we propose a probabilistic framework to predict the interaction probability of proteins. The notion of domain combination and domain combination pair is newly introduced and the prediction model in the framework takes domain combination pair as a basic unit of protein interactions to overcome the limitations of the conventional domain pair based prediction systems. The framework largely consists of prediction preparation and service stages. In the prediction preparation stage, two appearance pro-bability matrices, which hold information on appearance frequencies of domain combination pairs in the interacting and non-interacting sets of protein pairs, are constructed. Based on the appearance probability matrix, a probability equation is devised. The equation maps a protein pair to a real number in the range of 0 to 1. Two distributions of interacting and non-interacting set of protein pairs are obtained using the equation. In the prediction service stage, the interaction probability of a protein pair is predicted using the distributions and the equation. The validity of the prediction model is evaluated fur the interacting set of protein pairs in Yeast organism and artificially generated non-interacting set of protein pairs. When 80% of the set of interacting protein pairs in DIP database are used as foaming set of interacting protein pairs, very high sensitivity(86%) and specificity(56%) are achieved within our framework.

• 천문학회보
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• 제39권2호
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• pp.49-49
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• 2014

Blue Compact Dwarf galaxies (BCDs) are low-mass galaxies with recently enhanced star formation activity. Since the discovery of old stellar population in the BCDs, a number of hypotheses have been suggested as the origin of the current active star formation. One theory is tidal interactions such as fly-by and merger. In this study we test this hypothesis using a pair of BCDs, ESO 435-IG20 and ESO 435-IG16 that are separate by only ~80 kpc in projection at a similar redshift (at a ~9 Mpc distance). In the HIPASS survey, intergalactic atomic hydrogen envelope has been found to be covering both galaxies, making the pair a good candidate for the case where the star formation has been triggered by tidal interaction. We probe the gas morphology and kinematics of the BCD pair using ATCA HI data in order to find the evidence of tidal interaction. We also estimate star formation rates in the pair based on Ha emission and UV continuum, and compare with other dwarf galaxies to investigate how responsible the tidal interaction is for the enhanced star formation in this case.

• Bulletin of the Korean Chemical Society
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• 제9권4호
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• pp.209-212
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• 1988

The hydrophobic interaction leading to the formation of ion-pair between $MB^+$ and $TPB^-$ was investigated spectroscopically by varying the medium with the addition of 1,A-dioxane or urea. Beyond 0.01 mole fraction of 1,A-dioxane in water or above 2.0M urea the ion-pair appeared to be completely dissociated into individual ions. The ion-pair was not observed in common organic solvents and the absorption maxima of $MB^+$ were correlated relatively well with the ${\pi}^{\ast}$-scale.

• EDISON SW 활용 경진대회 논문집
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• 제4회(2015년)
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• pp.151-155
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• 2015

The molecular interactions between the nucleic acid bases and water molecules are important in organism. Despite Adenine-Thymine Hoogsteen base pair and Guanine-Cytosine Watson-Crick base pair have been demonstrated to be most stable in a gas phase, the effect of water on the stability of these base pairs remains elusive. Here we report the structural and thermodynamic characteristics on possible Adenine-Thymine and Guanine-Cytosine base pairs in a gas phase as well as in an aqueous phase by using quantum mechanical method and statistical mechanical calculations. First, we optimized the direct base-pair interaction energies of four Adenine-Thymine base pairs (Hoogsteen base pair, reverse Hoogsteen base pair, Watson-Crick base pair, and reverse Watson-Crick base pair) and three Guanine-Cytosine base pairs (GC1 base pair, GC2 base pair, and Watson Crick base pair) in a gas phase at the $B3LYP/6-31+G^{**}$ level. Then, the effect of solvent was quantified by the electronic reorganization energy and the solvation free energy by statistical mechanical calculations. Thereby, we discuss the effect of water on the stability of Adenine-Thymine and Guanine-Cytosine base pairs, and argue why Adenine-Thymine Watson-Crick base pair and Guanine-Cytosine Watson-Crick base pair are most stable in an aqueous environment.

• Journal of the Optical Society of Korea
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• 제18권6호
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• pp.799-808
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• 2014

The mechanism of optical interaction of two nanoholes, milled in an opaque gold film, by means of surface plasmon polariton (SPP) propagation is investigated. The interaction depends on the polarization direction of the incident light when the nanohole pair is illuminated through uniform single antenna excitations. It is shown that by illuminating one of the nanoholes, under single antenna excitation, the other nanohole can be excited indirectly via propagated SPPs from the excited nanohole. In addition, it is found that the spectrum of electromagnetic power above the surface of the metallic film at an arbitrary point along the axis of the nanohole pair presents two resonant peaks. These peaks are due to the optical interaction between nanoholes, where the short- and long-wavelength peaks can be assigned to in-phase and antiphase interactions of magnetic dipoles relative to each nanohole, respectively. The magnetic coupled dipole approximation (MCDA) method confirms the simulation results.