• Title/Summary/Keyword: PINX1

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Association of PINX1 but not TEP1 Polymorphisms with Progression to Hepatocellular Carcinoma in Thai Patients with Chronic Hepatitis B Virus Infection

  • Sriprapun, Methee;Chuaypen, Natthaya;Khlaiphuengsin, Apichaya;Pinjaroen, Nutcha;Payungporn, Sunchai;Tangkijvanich, Pisit
    • Asian Pacific Journal of Cancer Prevention
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    • v.17 no.4
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    • pp.2019-2025
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    • 2016
  • Hepatocellular carcinoma (HCC) is major health problem with high mortality rates, especially in patients with hepatitis B virus (HBV) infection. Telomerase function is one of common mechanisms affecting genome stability and cancer development. Recent studies demonstrated that genetic polymorphisms of telomerase associated genes such as telomerase associated protein 1 (TEP1) rs1713449 and PIN2/TERF1-interacting telomerase inhibitor 1 (PINX1) rs1469557 may be associated with risk of HCC and other cancers. In this study, 325 patients with HCC and 539 non-HCC groups [193 healthy controls, 80 patients with HBV-related liver cirrhosis (LC) and 266 patients with HBV-related chronic hepatitis (CH)] were enrolled to explore genetic polymorphisms of both SNPs using the allelic discrimination method based on MGB probe TaqMan real time PCR. We demonstrated that all genotypes of both genes were in Hardy-Wienberg equilibrium (P>0.05). Moreover, there was no significant association between rs1713449 genotypes and HCC risk, HCC progression and overall survival (P>0.05). Interestingly, we observed positive association of rs1469557 with risk of HCC when compared with the LC group under dominant (CC versus CT+TT, OR=1.89, 95% CI= 1.06-3.40, P=0.031) and allelic (C versus T alleles, OR=1.75, 95% CI=1.04-2.94, P=0.033) models, respectively. Moreover, overall survival of HCC patients with CC genotype of rs1469557 was significantly higher than non-CC genotype (Log-rank P=0.015). These findings suggest that PINX1 rs1469557 but not TEP1 rs1469557 might play a role in HCC progression in Thai patients with LC and be used as the prognosis marker to predict overall survival in HCC patients.

Expressional Analysis of Two Genes (Scd1 and Idi1) Down-regulated by Starvation Stress (영양고갈-스트레스에 의해서 하강발현하는 유전자(Scd1과 Idi1)의 분석)

  • Cho, Junho;Kwon, Young-Sook;Kim, Dong-Il;Kim, Bok Jo;Kwon, Kisang
    • Journal of Life Science
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    • v.24 no.7
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    • pp.762-768
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    • 2014
  • Diet exerts a major stress on the body and may affect gene expression and physiological functions. Understanding of cellular responses during starvation is necessary in developing strategies to reduce damage caused by diet. In this study, we isolated 10 genes (Comt, RGN, Scd1, Temt, Idi1, Fabp5, Car3, Cyp2c70, Pinx1, and Poldip3) that are down-regulated in starvation and are closely related to liver metabolism. Water supply during starvation had no effect on the induction of apoptosis, autophagy, and ERQC. The genes down-regulated by starvation were associated with many related pathways rather than limited to the liver homeostasis pathway. Water supply during starvation is important. However, maintaining NaCl homeostasis is more important. The results are thought to be closely related to gender-specific metabolism in starvation and NaCl.

Molecular Signatures in Chicken Lungs Infected with Avian Influenza Viruses

  • Jeong Woong Park;Marc Ndimukaga;Jaeyoung Heo;Ki-Duk Song
    • Korean Journal of Poultry Science
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    • v.50 no.4
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    • pp.193-202
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    • 2023
  • Influenza IAVs are encapsulated negative-strand RNA viruses that infect many bird species' respiratory systems and can spread to other animals, including humans. This work reanalyzed previous microarray datasets to identify common and specific differentially expressed genes (DEGs) in chickens, as well as their biological activities. There were 760 and 405 DEGs detected in HPAIV and LPAIV-infected chicken cells, respectively. HPAIV and LPAIV have 670 and 315 DEGs, respectively, with both viruses sharing 90 DEGs. Because of HPAIV infection, numerous genes were implicated in a fundamental biological function of the cell cycle, according to the functional annotation of DEGs. Of the targeted genes, expressions of CDC Like Kinase 3 (CLK3), Nucleic Acid Binding Protein 1 (NABP1), Interferon-Inducible Protein 6 (IFI6), PIN2 (TERF1) Interacting Telomerase Inhibitor 1 (PINX1), and Cellular Communication Network Factor 4 (WISP1) were altered in DF-1 cells treated with polyinosinic:polycytidylic acid (PIC), a toll-like receptor 3 (TLR3) ligand, suggesting that transcription of these genes be controlled by TLR3 signaling. To gain a better understanding of the pathophysiology of AIVs in chickens, it is crucial to focus more research on unraveling the mechanisms through which AIV infections may manipulate host responses during the infection process. Insights into these mechanisms could facilitate the development of novel therapeutic strategies.

Influence of $Ca^{++}$ Treatment on Growth and Mineral Elements of Cool-Season Turfgrass Species ($Ca^{++}$ 처리가 한지형 잔디의 생육 및 무기성분 함량에 미치는 영향)

  • Kim, Seong-Kyoo;Kang, Hoon;So, In-Sup
    • Asian Journal of Turfgrass Science
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    • v.16 no.1
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    • pp.1-10
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    • 2002
  • The influence of calcium on the growth of creeping bentgrass 'Penn-Al', perennial ryegrass 'Palmer II', Kentuckuy bluegrass 'Nassou' and tall fescue 'Boonsai 2000' in greenhouse was investigated. Creeping bentgrass 'Penn-A1', Kentucky bluegrass 'Nassou' and tall fescue 'Boonsai 2000' at Ca 4.0 me/L, and perennial ryegrass 'Palmer II' at Ca 2.0 me/L showed the best shoot growth. Creeping bentgrass 'Penn-A1', perennial ryegrass 'Palmer II' and Kentucky bluegrass 'Nassou' at Ca 1.0 me/L, and tall fescue 'Boonsai 2000' at Ca 4.0 me/L showed the best root growth, and there was little or no difference between different Ca concentrations. Creeping bentgrass 'Penn-Al' and Kentucky bluegrass 'Nassou' at Ca 4.0 mea, and perennial ryegrass 'Palmer II' at Ca 1.0 me/L had the highest number of tillers, and tall fescue 'Boonsai 2000' at Ca 4.0 me/L had the highest, but there was no difference between different Ca concentrations. As application rate of Ca concentration became higher, the concent of Ca in plant tissue increased, while the content of Mg in plant tissue decreased, and the content of Fe in plant tissue increased to Ca 4.0 me/L. The Ca treatment had not effect on N, p, K, and Zn of tissue content. The wick pot applied will be to research of plant nutrition in future because utilization of wick pot has an excellent precision and convenience.