• Bulletin of the Korean Chemical Society
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• v.32 no.spc8
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• pp.3051-3056
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• 2011

We calculate the free energy surfaces for two small proteins and a protein-RNA complex system by using a lattice model approach. In particular, we employ the Munoz-Eaton model, which is a native-structure based statistical mechanical model for studying protein folding problem. The model can provide very useful insights into the folding mechanisms by allowing one to calculate the free energy surfaces efficiently. We first calculate the free energy surfaces of ubiquitin and BBL, using both approximate and recently developed exact solutions of the model. Ubiquitin exhibits a typical two-state folding behavior, while BBL downhill folding in our study. We then extend the method to study of a protein-RNA complex. In particular, we focus on PAZ-siRNA complex. In order to elucidate the interplay between folding and binding kinetics for this system we perform comparative studies of PAZ only, PAZ-siRNA complex and two mutated complexes. We find that folding and binding are strongly coupled with each other and the bound PAZ is more stable than the unbound PAZ. Our results also suggest that the binding sites of the siRNA may serve act as a nucleus in the folding process.

• Korean Circulation Journal
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• v.52 no.8
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• pp.623-631
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• 2022

Background and Objectives: Pulmonary valve replacement (PVR) is the most common operation in adults with congenital heart disease (CHD). There is controversy regarding the best bioprosthesis. We compare the performance of stented bioprosthetic valves (the Mosaic [Medtronic^TM] porcine pericardial against Carpentier Perimount Magna Ease [Edwards^TM] bovine) in pulmonary position in patients with CHD. Methods: Between January 1999 and December 2019, all the PVRs were identified from hospital databases in 2 congenital heart centres in Spain. Valve performance was evaluated using clinical and echocardiographic criteria. Propensity score matching was used to balance the 2 treatment groups. Results: Three hundred nineteen patients were retrospectively identified. After statistical adjustment, 79 propensity-matched pairs were available for comparison Freedom from reintervention for the porcine cohort was 98.3%, 96.1%, and 91.9% at 3, 5, and 10 years and 100%, 98%, and 90.8% for the bovine cohort (p=0.88). Freedom from structural valve degeneration (SVD) for the porcine cohort was 96.9%, 92.8% and 88.7% at 3, 5, and 10 years and 100%, 98%, and 79.1% for the bovine cohort (p=0.38). Bovine prosthesis was associated with a reintervention hazard ratio (HR), 1.12; 95% confidence intervals (CIs), 0.24-5.26; p=0.89 and SVD HR, 1.69 (0.52-5.58); p=0.38. In the first 5 years, there was no difference in outcomes. After 5 years, the recipients of the bovine bioprosthesis were at higher risk for SVD (reintervention HR, 2.08 [0.27-16.0]; p=0.49; SVD HR, 6.99 [1.23-39.8]; p=0.03). Conclusions: Both bioprosthesis have similar outcomes up to 5 years, afterwards, porcine bioprosthesis seem to have less SVD.

• Proceedings of the Korea Water Resources Association Conference
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• 2005.09a
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• pp.265-266
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• 2005

• KSCE Journal of Civil and Environmental Engineering Research
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• v.42 no.5
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• pp.659-669
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• 2022

Recently, parking problems have repeatedly occurred not only in the residential areas of the old town, but in detached residential areas, neighborhood living facilities, and commercial areas of the planned New Town. This study suggests a strategy to minimize parking problems before constructing a New Town by reviewing these parking problems at the new city district planning stage. Parking problems can be divided into supply-demand and non-supply-based, and the solution strategy is reviewed in terms of supply and operation. The procedure for applying the solution strategy is proposed according to the effectiveness and ease of application.First, this paper suggests the PAZ (Parking Analysis Zone) as the basic analysis unit. Second, the supply-based parking problem in the concerned area based on the land use plan of Hanam Gyosan is reviewed. Last, solutions to a parking problem for each PAZ are presented.

• Journal of the Korean Arthroscopy Society
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• v.16 no.1
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• pp.17-25
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• 2012

Purpose: The aim of this retrospective study was to evaluate the relationship between appearance and size of bone bruise and severity of anterior cruciate ligament (ACL) injury with magnetic resonance imaging (MRI), furthermore, to identify the mechanism of ACL injury by analyzing the footprint of bone bruise. Materials and Methods: Sixty-five subjects who was taken an MRI within 6 weeks after acute ACL injury were studied. All MRI showed ACL injury and associated bone bruises. Bone bruises were analyzed using Costa-Paz classification based on appearance and location and also scored using Kornaat bone bruise grading system based on size and location. The severity of the ACL injury was graded using a 4-point system (ie, grade 0-3) with oblique coronal MRI. Results: There was statistically significant correlation between Costa-Paz classification of bone bruises in lateral femoral condyle and grade of ACL injury. There were more type 2 lesions in partial tear group (grade 1, 2), however, type 3 lesions of Costa-Paz classification in complete tear group (P=0.037). Significant positive correlations were observed between Kornaat total bone bruise score and grade of ACL injury (P=0.014). Most common ACL injury mechanism was pivot shift injury. Other mechanisms were clip valgus injury, phantom foot injury, and hyperextension injury. Conclusion: It is highly suggested that appearance and size of bone bruise is related to severity of ACL injury after acute ACL injury. The foot print of bone bruise provides valuable clues to identify ACL injury mechanism.

• Journal of the Korean Geographical Society
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• v.44 no.6
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• pp.691-705
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• 2009

Phytolith analysis was made on a 660cm core from Lake Gyeongpo in the East Sea of Korean Peninsula to clarify the environmental change including climate and agricultural characteristics during the Holocene. From the results of phytolith analysis, six phytoliths assemblage zone(PAZ) were recognized from the base to the surface. PAZ I around 5,000 yr BP suggests the transition from the warm and dry to the cool and wet climatic conditions. The climate of PAZ II(ca. 4,000-2,000 BP) was kept on warm, but repeated between dry and wet conditions. PAZ III(2,000~1,000 yr BP) suggests the expansion of agricultural activities under the warm and humid climatic conditions due to the significant phytoliths production of Paniceae and Oryza sativa. While PAZ IV(1,000~500 yr BP) indicates very cool and dry conditions, PAZ V and IV suggest the warm-dry and cool-humid climatic conditions, respectively. Similar to the results of pollen analysis in the lake, the agricultural activities were recognized by PAZ III around 2,000 yr BP from the results of phytolith analysis, and the rice cultivations such as Oryza sativa have been expanded since 2,000 yr BP or later.

• The Transactions of The Korean Institute of Electrical Engineers
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• v.65 no.1
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• pp.31-39
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• 2016

Power system engineers use power systems solution programs such as PSS/E, DSATool, Power World simulators for power system analysis. In this reason, KEPCO has begun to develop independent power system program, KW-PSS(KEPCO World Power system Solution) since 2002 and KW-PSS ver2.0 development was completed in 2011. However, it did not have much better functions compared with other programs. Therefore, we focused on the development of the practical and specialized functions. Consequently, PAZ(Power system AnalyZer) ver3.0 has been developed and it realized a differentiation than previous version. In other words, previous version focused on the basic function of power system analysis, PAZ ver3.0 has implemented many automated functions for power system operators were driven maximize operational efficiency. The unique feature of the implementation is as follows : Automated check for exceeding the breaker capacity, Scheduled outage automation, Control-file wizard for various voltage stability analysis, Scenario-based multiple transient stability analysis and Auto calculation of transmission line impedance. As shown in these functions, Those functions provide to use power system analysis easily by automation and simplification for power system engineers. We will secure national expertise through PAZ ver3.0. In addition it will be able to gain competitive edge through the steady development in the world market.

• ALGAE
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• v.37 no.3
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• pp.185-204
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• 2022

The genus Coolia A. Meunier 1919 has a global distribution and is a common member of epiphytic dinoflagellate assemblages in neritic ecosystems. Coolia monotis is the type species of the genus and was the only known species for 76 years. Over the past few decades, molecular characterization has unveiled two species complexes that group morphologically very similar species, so their limits are often unclear. To provide new knowledge on the biogeography and species composition of the genus Coolia, 16 strains were isolated from Bahía de La Paz, Gulf of California. The species were identified by applying morphological and molecular approaches. The morphometric characteristics of all isolated Coolia species were consistent with the original taxa descriptions. Phylogenetic analyses (large subunit [LSU] rDNA D1 / D2 and internal transcribed spacer [ITS] 1 / 5.8S / ITS2) revealed a species assemblage comprising Coolia malayensis, C. palmyrensis, C. tropicalis, and the C. cf. canariensis lineage. This is the first report of Coolia palmyrensis and C. cf. canariensis in Mexico and C. tropicalis in the Gulf of California. Our results strengthen the biogeographical understanding of these potentially harmful epiphytic dinoflagellate species.

• Pediatric Gastroenterology, Hepatology & Nutrition
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• v.22 no.6
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• pp.588-593
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• 2019

This study aimed to report three new cases of an association between two rare conditions, congenital portosystemic shunts (CPSS) and trimethylaminuria (TMAU), and the efficacy of endovascular closure of the CPSS for resolving TMAU. Between November 2014 and April 2017, 15 patients with CPSS were enrolled in this prospective study to assess the efficacy of percutaneous endovascular shunt closure. Three patients presented with clinical symptoms of TMAU that were confirmed by urine analysis of trimethylamine (TMA) and TMA n-oxide. One year after endovascular closure of the congenital portosystemic shunt, the same parameters were evaluated were obtained and the values were compared to the pretreatment values. The results indicated the disappearance of clinical symptoms of TMAU and normalization of the urine test parameters in two patients and no changes in one patient, who developed new portosystemic communications.

• The Bulletin of The Korean Astronomical Society
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• v.30 no.1
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• pp.24.2-24.2
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• 2005