• Title/Summary/Keyword: P-frame

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Overexpression of the SPP2 gene of saccharomyces cerevisiae and production of antibodiesd to Spp2p

  • Park, Kwang-Hark;Lea, Ho-Zoo;L. Woolford;Kim, Kyung-Hoon
    • Journal of Microbiology
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    • v.33 no.3
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    • pp.201-207
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    • 1995
  • We have previously reported that SPP2 gene product of yeast Saccharomyces cerevisiae is involved in the pre-mRNA splicing. To investigate the rol ein the splicing pathway of the Spp2p protein, the SPP2 gene was overexpressed in Escherichia coli and polyclonal antibodies to Spp2p were generated from rabbits. First, a DNA fragment containing the SPP2 GENE without its promoter was subcloned into an E. coli expression vector, pKK233-3. The resulting recombinant plasmid pBQ14 contained an IPTG inducible tac promoter and the SPP2 structural gene. Overexpression of the SPP2 gene was achieved by additionof 0.1 to 1.0 mM IPTG to a logarithmic culture of E. coli JM103(pBQ14) for 90 min at 37.deg.C. Sequence of N-terminal 15 amino acids of the overproduced protein was well matched to the deduced one from the SPP2 reading frame. Then, polyclonal antibodies were generated from rabbits immunized with gel-purified SppSp protein. These antibodies reacted specifically with the Spp2p protein extracted from yeast cells expressing the SPP2 gene to a great extent. The antibodies could also block the activity of yeast splicing extracts.

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Real-time Ball Detection and Tracking with P-N Learning in Soccer Game (P-N 러닝을 이용한 실시간 축구공 검출 및 추적)

  • Huang, Shuai-Jie;Li, Gen;Lee, Yill-Byung
    • Proceedings of the Korea Information Processing Society Conference
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    • 2011.04a
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    • pp.447-450
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    • 2011
  • This paper shows the application of P-N Learning [4] method in the soccer ball detection and improvement for increasing the speed of processing. In the P-N learning, the learning process is guided by positive (P) and negative (N) constraints which restrict the labeling of the unlabeled data, identify examples that have been classified in contradiction with structural constraints and augment the training set with the corrected samples in an iterative process. But for the long-view in the soccer game, P-N learning will produce so many ferns that more time is spent than other methods. We propose that color histogram of each frame is constructed to delete the unnecessary details in order to decreasing the number of feature points. We use the mask to eliminate the gallery region and Line Hough Transform to remove the line and adjust the P-N learning's parameters to optimize accurate and speed.

Nucleotide Sequencing Analysis of a Gene Coding for 3-Isopropylmalate Dehydrogenase of Kluyveromyces fragilis

  • Hong, Soon-Duck;Kim, Jong-Guk;Lee, Dong-Sun;Woo, Ju-Hyung;Lee, Sang-Yong
    • Journal of Microbiology and Biotechnology
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    • v.3 no.2
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    • pp.91-94
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    • 1993
  • A 3-isopropylmalate dehydrogenase (3-IPMD) gene was cloned from Kluyveromyces fragilis. pJK104 could complement Escherichia coli leuB and Saccharomyces cerevisiae leu2 auxotrophs. The coding region was subcloned and the nucleotide sequence was determined. A 1.8 Kb EcoRI/SphI fragment of pJK104 subcloned in pUC18 could still complement the leuB mutation. An open reading frame of 1164 bp that corresponds to a polypeptide of 387 amino acids was found in the cloned fragment. The homology between the 3-isopropylmalate dehydrogenase of S. cerevisiae and that of K. fragilis was 68.13% in nucleotides.

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HADAMARD-TYPE FRACTIONAL CALCULUS

  • Anatoly A.Kilbas
    • Journal of the Korean Mathematical Society
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    • v.38 no.6
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    • pp.1191-1204
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    • 2001
  • The paper is devoted to the study of fractional integration and differentiation on a finite interval [a, b] of the real axis in the frame of Hadamard setting. The constructions under consideration generalize the modified integration $\int_{a}^{x}(t/x)^{\mu}f(t)dt/t$ and the modified differentiation ${\delta}+{\mu}({\delta}=xD,D=d/dx)$ with real $\mu$, being taken n times. Conditions are given for such a Hadamard-type fractional integration operator to be bounded in the space $X^{p}_{c}$(a, b) of Lebesgue measurable functions f on $R_{+}=(0,{\infty})$ such that for c${\in}R=(-{\infty}{\infty})$, in particular in the space $L^{p}(0,{\infty})\;(1{\le}{\le}{\infty})$. The existence almost every where is established for the coorresponding Hadamard-type fractional derivative for a function g(x) such that $x^{p}$g(x) have $\delta$ derivatives up to order n-1 on [a, b] and ${\delta}^{n-1}[x^{\mu}$g(x)] is absolutely continuous on [a, b]. Semigroup and reciprocal properties for the above operators are proved.

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Design of ECC Calculator for Digital Transmission Content Protection(DTCP) (디지털 컨텐츠 보호를 위한 DTCP용 타원곡선 암호(ECC) 연산기의 구현)

  • Kim Eui-Seok;Ryu Tae-Gyu;Jeong Yong-Jin
    • Proceedings of the IEEK Conference
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    • 2004.06a
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    • pp.47-50
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    • 2004
  • In this paper, we implement an Elliptic Curve Cryptosystem(ECC) processor for DTCP. Because DTCP(Digital Transmission Content Protection) uses GF(p), where p is a 160-bit prime integer, we design a scalar multiplier based on GF(p). The scalar multiplier consists of a modular multiplier and an adder. The multiplier uses montgomery algorithm which is implemented with CSA(Carry-save Adder) and CLA(Carry-lookahead Adder). Our new scalar multiplier has been synthesized using Samsung 0.18 um CMOS technology and the maximum operation frequency is estimated 98 MHz, with the size about 65,000 gates. The resulting performance is 29.6 kbps, that is, it takes 5.4 msec to process a 160-bit data frame. We assure that this performance is enough to be used for digital signature, encryption/decryption, and key exchanges in real time environments.

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Process Development for Concentration and Stabilization of Recombinant Endoxylanase Expressed in Bacillus subtilis

  • Choi, Young-Rok;Seo, Eun-Jin;Heo, Sun-Yeon;Nam, Soo-Wan;Kwon, Hyun-Ju;Kim, Byung-Woo
    • 한국생물공학회:학술대회논문집
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    • 2003.10a
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    • pp.536-539
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    • 2003
  • A strong constitutive $P_{JH}$ promoter from Bacillus sp. was applied to overexpress the endoxylanase gene in Bacillus subtilis. The expression plasmid, pJHKJ4, was designed to contain the $P_{JH}$ promoter and open reading frame of endoxylanase including its own promoter. The plasmid was introduced into B. subtilis DB431 and the resulting transformant was grown on LB glucose medium. The endoxylanase activity in the culture supernatant reached about 140 unit/ml. The enzyme in the supernatant was efficiently concentrated to 70% by two-step treatments of ammonium sulfate saturation and ultrafiltration. The stabilization of concentrated enzyme solution at different storage temperatures was examined with various stabilizers such as NaCl, $CaCl_2$, sucrose, sorbitol, polyethylene glycol, and Tween-80.

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Dynamics of ARF regulation that control senescence and cancer

  • Ko, Aram;Han, Su Yeon;Song, Jaewhan
    • BMB Reports
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    • v.49 no.11
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    • pp.598-606
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    • 2016
  • ARF is an alternative reading frame product of the INK4a/ARF locus, inactivated in numerous human cancers. ARF is a key regulator of cellular senescence, an irreversible cell growth arrest that suppresses tumor cell growth. It functions by sequestering MDM2 (a p53 E3 ligase) in the nucleolus, thus activating p53. Besides MDM2, ARF has numerous other interacting partners that induce either cellular senescence or apoptosis in a p53-independent manner. This further complicates the dynamics of the ARF network. Expression of ARF is frequently disrupted in human cancers, mainly due to epigenetic and transcriptional regulation. Vigorous studies on various transcription factors that either positively or negatively regulate ARF transcription have been carried out. However, recent focus on posttranslational modifications, particularly ubiquitination, indicates wider dynamic controls of ARF than previously known. In this review, we discuss the role and dynamic regulation of ARF in senescence and cancer.

Cloning and Overexpression of the Cdd Gene Encoding Cytidine Deaminase from Salmonella typhimurium

  • Lee, Sang-Mahn
    • Korean Journal of Environmental Biology
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    • v.21 no.1
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    • pp.56-59
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    • 2003
  • The Salmonella typhimurium cdd gene encoding cytidine deaminase (cyti-dine/2'-deoxycytidine aminohydrolase; EC 3.5.4.5.) was isolated through shotgun clon-ing by complementation of the E. coli odd mutation. By subsequent deletion and sub-cloning from the original 3.7 Kb of EcoRI insert (pSAMI), the precise region of the cdd structural gene is located around the BglII site in the middle part of 1.7 Kb of NruI/PvuI segment. The 1.7 Kb containing odd gene wag subcloned to the pUC18 vector and the nucleotide sequence of the cdd gene was determined. When the putative ribosorne-binding site (Shine-Dalgarno sequence) and initiation codon were predicted to be GAGG at the position 459 and ATG at the position 470, respectively, there was an open reading frame of 885 nucleotides, encoding an 294 amino acid protein. The cdd gene expression in E. coli JF611/pSAMI was amplified about 50 fold compared to that of the wild type. The cdd gene expression was maintained in the stationary phase after rea-ching the peak in the late logarithmic phase.

Voicing in intervocalic lax obstruents /p, t, k, c/ of Korean

  • Yun, Il-Sung
    • Speech Sciences
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    • v.7 no.3
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    • pp.21-33
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    • 2000
  • There are two hypotheses with reference to voicing in Korean intervocalic lax stops /p, t, k/ and affricate /c/: (1) the phonologically voiceless lax stops /p, t, k/ and affricate /c/ are realised as voiced allophones in the intervocalic position; (2) the shorter the lax consonant, the higher the percentage of voicing. But the literature reveals that there are views rejecting or doubting them. To clarify these, an experiment was carried out, using a Sun Sparcstation, twelve native speakers of Korean and speech materials embedded in a sentence frame. The results showed that the extent of voicing in lax stops and affricate was too inconsistent to support the full voicing hypothesis, and shorter duration (faster speech) did not necessarily cause a higher percentage of voicing.

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Characterization of a Positive Regulatory cis-Element and Transacting Factors for the Hepatitis B Viral Pregenomic Promoter

  • Choi, Cheol-Yong;Park, Geon-Tae;Rho, Hyune-Mo
    • BMB Reports
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    • v.29 no.2
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    • pp.156-162
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    • 1996
  • Transcription of hepatitis B viral pregenomic promoter is known to be regulated mainly by the combined interaction of enhancers I, II and the intervening regulatory sequences between the two enhancers. A positive regulatory element was identified by serial deletion and measuring the linked chloramphenicol acetyltransferase (CAT) activities, which overlapped with the 5' region of the X open reading frame. When the positive regulatory element was inserted upstream of the SV40 early promoter, it elevated SV40 promoter activity in HepG2 cells. Two cellular proteins of 110 (p110) and 33 (p33) kDa interacted with the positive element and both of them were present in the nucleus, but p110 also existed in the cytoplasm in phosphorylated form. Dephosphorylation of p110 by acid phosphatase enhanced the DNA-binding activity of p110. The p33 could bind to single-strand DNA specifically as well as to double-strand DNA.

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