• Title/Summary/Keyword: Nuclei density

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Meaning and Definition of Partial Charges (부분 전하의 의미와 정의)

  • Cho, Seung Joo
    • Journal of Integrative Natural Science
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    • v.3 no.4
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    • pp.231-236
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    • 2010
  • Partial charge is an important and fundamental concept which can explain many aspects of chemistry. Since a molecule can be regarded as neclei surrounded by electron cloud, there is no way to define a partial charge accurately. Nevertheless, there have been many attempts to define these seemingly impossible parameters, since they would facilitate the understanding of molecular properties such as molecular dipole moment, solvation, hydrogen bonding, molecular spectroscopy, chemical reaction, etc. Common methods are based on the charge equalization, orbital occupancy, charge density, and electric multipole moments, and electrostatic potential fitting. Methods based on the charge equalization using electronegativity are very fast, and therefore they have been used to study many compounds. Methods to subdivide orbital occupancy using basis set conversion, relies on the notion that molecular orbitals are composed of atomic orbitals. The main idea is to reduce overlap integral between two nuclei using converted orthogonal basis sets. Using some quantum mechanical observables like electrostatic potential or charge multipole moments. Using potential grids obtained from wavefunction, partial charges can be fitted. these charges are most useful to describe intermolecular electrostatic interactions. Methods to using dipole moment and its derivatives, seems to be sensitive the level of theory, Dividing electron density using density gradient being the most rigorous theoretically among various schemes, bears best potential to describe the charge the most adequately in the future.

Ultrastructure of the Eye in the Snail, Incilaria fruhstorferi (산민달팽이 (Incilaria fruhstorferi) 눈의 미세구조)

  • Chang, Nam-Sub;Han, Jong-Min;Lee, Kwang-Joo
    • Applied Microscopy
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    • v.28 no.3
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    • pp.363-377
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    • 1998
  • After the investigation on the eye of Incilaria fruhstorieri with light and electron microscopes, the following results were obtained. The eye of Incilaria fruhstorferi comprises cornea, lens, vitreous body, retina, and optic nerve inward from the outside. Cornea is composed of squamous, cuboid, columnar and irregular cells, which appear to be light due to their low electron density. In their cytoplasms, glycogen granules, multivesicular body, and nucleus were observed. Vitreous body, located behind non-cellular transparent lens, is filled with long and short microvilli protruding from the retinal epithelia. Retinal epithelium, the organ to perceive objects, is divided into four parts; microvillar layer pigment layer, nuclear layer, and neutrophils layer, from the apical portion. Microvillar layer consists of the type-I photoreceptor cells and pigmented granule cells. In the apical portion of their cytoplasms, long microvilli (length, $19{\mu}m$) , short microvilli (length, $8{\mu}m$), and rolled microvilli grow thick in the irregular and mixed forms. Photoreceptor cells are classified into type-I and type-II, according to their structures. The type-I cell has the apical portion rising roundly like a fan and the lower part which looks like the helve of a fan. In the cytoplasm of the apical portion, there are clear vesicles, cored vesicles, ovoid mitochondria, and microfilaments, and in the cytoplasm of the lower part, photic vesicles with their diameters about 60nm aggregate densely. The type-II photoreceptor cell, located at the lower end of the type-I cells, has a very large ovoid nucleus 3nd no microvilli. In the cytoplasm of the type-II cell, the photic vesicles with sizes 60nm aggregate more densely than in the cytoplasm of the type-I cell. Pigmented cells are classified into type-A and type-B, according to their structures. The type-A is identified to be a large cell containing round granules (diameter, $0.5{\mu}m$) of very high electron density, while the type-B is identified as a small cell where the irregular granules (diameter, $0.6{\mu}m$) of a little lower electron density amalgamate. Nuclear layer ranges from the bottom of pigment layer to the top of the capsule, and contains three kinds of nuclei (nuclei of the type-II photoreceptor cell, pigmented granule cell, and accessory neuron). The capsules covering the outmost part of the eyeball are composed of collagenous fiber and three longitudinal muscle layers (the thickness of each longitudinal muscle layer, $0.4{\mu}m$) and thick circular muscle layer (thickness, $0.3{\mu}m$). Around the capsules, there is a neurophile layer consisting of neurons and nerve fibers. Each neuron has a relatively large ovoid nucleus for its cytoplasm, and in the karyosome, large lumps of keterochromatin form a wheel nucleus.

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STREAMING CIRCUMNUCLEAR GAS OF THE SEYFERT 2 GALAXY NGC 5728

  • Son, Dong-Hoon;Hyung, Siek;Lee, Seong-Jae;Ferruit, Pierre
    • Journal of The Korean Astronomical Society
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    • v.42 no.5
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    • pp.125-134
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    • 2009
  • We investigated the circumnuclear region of the Seyfert 2 galaxy NGC 5728, using the CFHT 3.6 m OASIS $[S_{II}]$, $[O_{III}]$ & $H\beta$ spectral images complemented with the IUE spectra. The physical condition of the circumnuclear zone has been derived: the gas density (indicated by $[S_{II}]$6716/31 ratio) around the C core is generally similar to that around the NW core, i.e., $\sim500cm^{-3}$. However, there appears to be evidence of a higher density shell in front of the NW core, $\sim10^4cm^{-3}$ at -250 km $s^-1$. The IUE $Si_{III}$]1892/$C_{III}$]1909 ratio implies a possible presence of a broad emission region of gas densities of $\sim10^{10}cm^{-3}$. The SE cone and surrounding area show several prominent features, while the NW cone does not show any particular structure: we identified three prominent blobs in the SE cone and one possible candidate in the NW cone. The outflow activities exist within the relatively large conic opening angle. We discussed the possibility of inflow or outflow activities of blobs found in the circumnuclear region of NGC 5728. The gas around two cores, two cones, and several blobs, is likely to be excited by the AGN hot source(s).

NEAR-INFRARED SPECTROSCOPY OF CO RO-VIBRATIONAL ABSORPTION TOWARD HEAVILY OBSCURED AGNs

  • Shirahata, Mai;Nakagawa, Takao;Oyabu, Shinki;Usuda, Tomonori
    • Publications of The Korean Astronomical Society
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    • v.32 no.1
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    • pp.169-173
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    • 2017
  • We provide a new physical insight on the hot molecular clouds near the nucleus of the obscured AGNs. We performed near-infrared spectroscopic observations of heavily obscured AGNs in order to reveal physical characteristics of molecular clouds, especially focused on the CO fundamental ro-vibrational absorption around $4.7{\mu}m$. We have made systematic moderate-resolution spectroscopic observations toward 30 representative (U)LIRGs using the AKARI/IRC, and some of the ULIRGs showed the strong CO absorption feature. For three bright (U)LIRGs that show a steep red continuum with the deep CO absorption feature, IRAS 08572+3915, UGC 05101, and IRAS 01250+2832, we have also made high-resolution spectroscopic observations using the Subaru/IRCS. We have successfully detected many absorption lines up to highly excited rotational levels, and these lines are very deep and extremely broad. The derived physical conditions of molecular clouds are extreme; the gas temperature is as high as several 100 to a 1000 K, the $H_2$ column density is larger than $10^{22}cm^{-2}$, and the gas density is greater than $10^7cm^{-3}$. Such hot and dense molecular clouds must exist around the central engine of the AGN.

Understanding the physical environment of relativistic jet from 3C 279 using its spectral and temporal information

  • Yoo, Sung-Min;Lee, Sang-Sung;An, Hongjun;Kim, Sang-Hyun;Lee, Jee Won;Hodgson, Jeffrey A.;Kang, Sincheol
    • The Bulletin of The Korean Astronomical Society
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    • v.44 no.1
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    • pp.35.3-35.3
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    • 2019
  • Blazars are a subclass of active galactic nuclei (AGNs) with relativistic jets aligned with our line of sight. The jet physics is yet to be understood, but can be studied with blazar variability (e.g., flares). The highly variable blazar 3C 279 has shown a general decline of its radio flux density since 2013, but the flux density has been increasing since 2017. To better understand physical properties of 3C 279 related with the flux variations, we analyze multi-frequency new radio data obtained with Korean VLBI Network (KVN), as well as archival data from Owens Valley Radio Observatory (OVRO) and Submillimeter Array (SMA). We measure the radio spectral variability and infer the relativistic jet properties of 3C 279. The high-cadence OVRO and SMA observations are used to construct detailed light curves of the source, and KVN data supplement the spectral coverage and allow us to locate the spectral break frequencies precisely. In this talk, we present our analysis results and interpret them using a blazar jet model.

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STARS: A 3D GRID-BASED MONTE CARLO CODE FOR RADIATIVE TRANSFER THROUGH RAMAN AND RAYLEIGH SCATTERING WITH ATOMIC HYDROGEN

  • Chang, Seok-Jun;Lee, Hee-Won
    • Journal of The Korean Astronomical Society
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    • v.53 no.6
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    • pp.169-179
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    • 2020
  • Emission features formed through Raman scattering with atomic hydrogen provide unique and crucial information to probe the distribution and kinematics of a thick neutral region illuminated by a strong far-ultraviolet radiation source. We introduce a new 3-dimensional Monte-Carlo code in order to describe the radiative transfer of line photons that are subject to Raman and Rayleigh scattering with atomic hydrogen. In our Sejong Radiative Transfer through Raman and Rayleigh Scattering (STaRS) code, the position, direction, wavelength, and polarization of each photon is traced until escape. The thick neutral scattering region is divided into multiple cells with each cell being characterized by its velocity and density, which ensures flexibility of the code in analyzing Raman-scattered features formed in a neutral region with complicated kinematics and density distribution. To test the code, we revisit the formation of Balmer wings through Raman scattering of the far-UV continuum near Lyβ and Lyγ in a static neutral region. An additional check is made to investigate Raman scattering of O vi in an expanding neutral medium. We find a good agreement of our results with previous works, demonstrating the capability of dealing with radiative transfer modeling that can be applied to spectropolarimetric imaging observations of various objects including symbiotic stars, young planetary nebulae, and active galactic nuclei.

Radiative pressure feedback in obscured quasars

  • Jun, Hyunsung;Assef, Roberto;Ricci, Claudio;Stern, Daniel
    • The Bulletin of The Korean Astronomical Society
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    • v.44 no.2
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    • pp.36.4-36.4
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    • 2019
  • Ricci et al. (2017, Nature, 549, 488) discovered a lack of high accretion rate, obscured Active Galactic Nuclei (AGN) in the hard X-ray selected Swift/BAT local AGN survey. This was interpreted as radiative pressure driven AGN feedback clearing its immediate vicinity composed of dusty gas (having an effectively low Eddington limit in the order of 0.01-0.1), and governing the level of nuclear obscuration. As we find Eddington-limited accretion and high extinction values among obscured, luminous AGN (quasars) however, it may be that the local X-ray AGN and the distant quasars undergo different feedback mechanisms in clearing their surroundings. In this study, we simply compare the obscuring column density and Eddington ratio values for quasars selected by various methods, including X-ray obscured, optically blue, infrared red/luminous, and submillimeter bright AGN. We find obscured quasars lying on the column density-Eddington ratio diagram previously unoccupied by Ricci et al., suggesting that radiative pressure is insufficient to clear its dusty structure at high luminosity, or that the dust in obscured quasars are more extended than the low luminosity counterparts to become fully transparent. We discuss alternative feedback scenarios that may be more relevant for obscured quasars.

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Secondary fragments of proton and helium ion beams in High-Density Polyethylene phantom: A Monte Carlo simulation study

  • M. Arif Efendi;Chee Keat Ying
    • Nuclear Engineering and Technology
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    • v.56 no.5
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    • pp.1754-1761
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    • 2024
  • In hadrontherapy, secondary fragments are generated by nuclear interactions of the incident heavy ion beam with the atomic nuclei of the target. It is important to determine the yield of production and the dose contribution of these secondary fragments in order to determine the radiobiological effectiveness more accurately. This work aims to fully identify the secondary fragments generated by nuclear interactions of proton and helium (4He) ion beams in a High-Density Polyethylene (HDPE) target and to investigate the dose contributions by secondary fragments. Incident protons with energies of 55.90 MeV and 105.20 MeV and helium ions with energies of 52.55 MeV/u and 103.50 MeV/u in the HDPE phantom have been investigated by the means of Geant4 Monte Carlo (MC) simulations. Simulated results were validated using NASA Space Radiation Laboratory (NSRL) Bragg curves experimental data. The results showed that the dose contribution of secondary fragments deriving from helium ion beams is three times higher than in the case of proton beams. This is due to a higher production of nuclear fragments in the case of helium ion beams. This work contributes to a better understanding of secondary fragments generated by protons and helium ions in the HDPE target.

Ultrastructural studies on the parotid gland of Korean native goat (한국재래산양 귀밑샘에 관한 전자현미경적 연구)

  • Kim, Jin-sang;Lee, Heungshik S;Lee, In-se;Kang, Tae-cheon
    • Korean Journal of Veterinary Research
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    • v.34 no.4
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    • pp.715-725
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    • 1994
  • The ultrastructural investigations of the parotid gland of Korean native goat were carried out by transmission electron microscopy. The results were as follows; 1. The acini of parotid gland were composed of light and dark acinar cells. 2. In the light acinar cells, the secretory granules were classified into three types according to their electron densities and dense bodies. One type of granules was low electron density and had no dense bodies. Another type was low electron density and had dense bodies, and the other type was low electron density and had granular dense bodies. 3. The secretory granules of dark acinar cells showed high electron density and were also calssified into three types by dense bodies as the same way as in the light acinar cells. 4. The intercalated ducts consisted of simple cuboidal epithelium. The nuclei of epithelial cells were oval or round form, located at the central part, and had infolding nuclear membranes and one or two nucleoli. 5. The cells of both of the striated and excretory ducts were composed of light cells, dark cells, specific light cells and basal cells. 6. The nerve terminals were distinguished into two types. One had large granular synaptic vesicles, and another had small agranular synaptic vesicles.

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Magnetic Orientations of Bull Sperm Treated by DTT or Heparin

  • Suga, D.;Shinjo, A.;Kumianto, E.;Nakada, T.
    • Asian-Australasian Journal of Animal Sciences
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    • v.13 no.1
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    • pp.10-18
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    • 2000
  • This paper describes the magnetic orientation of the intact and demembranated bull sperm treated by DTT or heparin in a 5,400 G static field. Semen samples collected from four bulls (Japanese Black) were mixed to the same sperm density. One percentage triton X-100 was used to extract the plasma membrane. The intact and demembranated sperm suspensions were treated with 20, 200, 2,000 mM DTT, 100, 1,000 or 10,000 units heparin solutions at $4{^{\circ}C}$ for 6 days. The decondensation of the sperm nuclei treated by DTT or heparin was examined by measuring the sperm head area at 1, 3, and 6 days. After measuring the area, each sperm sample was exposed to a 5,400 G static magnetic field generated by Nd-Fe-B permanent magnets for 24 hours at room temperature. Results showed that the decondensation of bull sperm nuclei was not induced by the heparin treatment, however, incomplete decondensation was induced by the DTT treatment. During the magnetic orientation, bull sperms treated by DTT or heparin had low percentages of long axis perpendicular to the magnetic lines of force. However, different aspects were obtained for long axis perpendicular orientations following treatment of DTT or heparin. Through the DTT treatment, the decline of long axis perpendicularly oriented percentages was due to the increase of long axis parallel orientation with the head of the flat plane perpendicular to the magnetic lines of force, whereas, using the heparin treatment, the decline of long axis perpendicular orientation was due to the increment of long axis parallel orientation with the head of the flat plane parallel to the magnetic lines of force. Also, percentages of the head of the flat plane perpendicular were decreased by the heparin treatment. These findings suggest that maintaining the structure of protamine in the chromatin is necessary for the sperm head to orient with its flat plane perpendicular, and maintaining the disulfide bond in the chromatin is necessary for the long axis of sperm to orient perpendicularly.