• Journal of the Korean Society of Environmental Restoration Technology
• /
• v.15 no.4
• /
• pp.61-80
• /
• 2012

This study is to offer the basic data for restoration and conservation of wetland ecosystem by surveying and analysing the flora distributed in the Binae marsh, Namhan River, Chungju-si. The flora in the Binae marsh were verified 204 taxa including 48 families, 152 genera, 179 species, 23 varieties and 2 forms. In flora, pteridophyta were 2 taxa including 1 family, 1 genus and 2 species, among angiospermae, dicotyledonae were 153 taxa including 37 families, 110 genera, 138 species, 13 varieties and 2 forms and monocotyledonae were 49 taxa including 10 families, 41 genera, 39 species and 10 varieties. In the result of classifying the life form of flora, megaphanerophytes (M), nanophanerophytes (N) and chamaiphytes (Ch) were each 9 taxa (4.4%), 37 taxa (18.1%) of hemicryptophytes (H), 19 taxa (9.3%) of geophytes (G), 97 taxa (47.6%) of therophytes (Th) and 24 taxa (11.8%) of hydrophytes (HH). The rare plant designated by Korea Forest Service was 1 taxa (Aristolochia contorta), and the endemic plant was 1 taxa (Salix koriyanagi) too. The specific plants by floristic region were 6 taxa. From among these, the species of degree I were 5 taxa including Salix chaenomeloides, Aristolochia contorta, Artemisia selengensis, Cirsium pendulum and Vallisneria natans, and degree III was 1 taxa including Alisma orientale. The naturalized plants were 45 taxa and the invasive alien plants were 3 taxa including Sicyos angulatus, Ambrosia artemisiifolia and Ambrosia trifida. The naturalized index (NI) was about 22.1%, 16.1% of urbanized index (UI) and 27.3% of disturbed index (DI). The extinct species by construction were 17 taxa including Persicaria sagittata, Typha orientalis, Zizania latifolia and so forth. The new-occured species were 14 taxa including Brassica juncea, Thlaspi arvense, Carduus crispus and so forth. The important species among the extinct species were Aristolochia contorta, Alisma orientale and Vallisneria natans.

• Molecules and Cells
• /
• v.19 no.3
• /
• pp.391-397
• /
• 2005

Molecular identification techniques are used where morphological characters are not useful for distinguishing species that resemble each other closely. The example studied here is the Adoxophyes species complex, in which A. orana (Fischer von $R{\ddot{o}}sslerstamm$) is officially the only known Korean species in the genus Adoxophyes (Lepidoptera: Tortricidae). However there have been suspicions that at least two types of A. orana exist in Korea based on the distribution and range of the host, with A. orana attacking apples and peaches, and another Adoxophyes sp. attacking tea and pears. The latter is presumed to be A. honmai (Yasuda), but the two have remained confused because of their extreme morphological similarity, despite several Asian studies of pheromonal and morphological characteristics. To confirm the occurrence of an Adoxophyes species other than A. orana in Korea, we compared 940 bp of the mitochondrial cytochrome oxidase I (COI) gene from 16 samples of Adoxophyes and found that there is a second Adoxophyes species different from A. orana. Comparison of the different sequences to that of Japanese A. honmai confirmed that they belong to the latter. From the sequence difference between the two Korean species, we were able to develop new PCR primer sets that distinguish them. This molecular identification technique with no enzyme digestion or sequencing step is a convenient and rapid way of differentiating between species that are hard to distinguish morphologically.

• Journal of Microbiology and Biotechnology
• /
• v.19 no.6
• /
• pp.560-565
• /
• 2009

We isolated nine endophytic fungi from the roots of salt-stressed soybean cultivar Daewonkong and screened them for growth-promoting secondary metabolites. Of all fungal isolates, P-4-3 induced maximum growth promotion of waito-c rice and soybean. Analysis of the culture filtrate of P-4-3 showed the presence of physiologically active gibberellins $GA_1$, $GA_3$, $GA_4$, and $GA_7$, along with physiologically inactive $GA_{15}$ and $GA_{24}$. The plant growth promotion and gibberellin-producing capacity of P-4-3 was much higher than wild-type Gibberella fujikuroi, which was taken as the control during the present study. The fungal isolate P-4-3 was identified as a new strain of Scolecobasidium tshawytschae through the morphological characteristics and phylogenetic analysis of 18S rDNA sequence. Gibberellins production and plant growth promoting ability of genus Scolecobasidium was reported for the first time in the present study.

• Journal of Microbiology and Biotechnology
• /
• v.20 no.5
• /
• pp.893-903
• /
• 2010

A cellulolytic and xylanolytic enzyme complex-producing alkalothermoanaerobacterium strain, Tepidimicrobium xylanilyticum BT14, is described. The cell was Grampositive, rod-shaped, and endospore-forming. Based on 16S rRNA gene analysis and various lines of biochemical and physiological properties, the strain BT14 is a new member of the genus Tepidimicrobium. The strain BT14 cells had the ability to bind to Avicel, xylan, and corn hull. The pH and temperature optima for growth were 9.0 and $60^{\circ}C$, respectively. The strain BT14 was able to use a variety of carbon sources. When the bacterium was grown on corn hulls under an anaerobic condition, a cellulolytic and xylanolytic enzyme complex was produced. Crude enzyme containing cellulase and xylanase of the strain BT14 was active in broad ranges of pH and temperature. The optimum conditions for cellulase and xylanase activities were pH 8.0 and 9.0 at $60^{\circ}C$, respectively. The crude enzyme had the ability to bind to Avicel and xylan. The analysis of native-PAGE and native-zymograms indicated the cellulosebinding protein showing both cellulase and xylanase activities, whereas SDS-PAGE zymograms showed 4 bands of cellulases and 5 bands of xylanases. Evidence of a cohesinlike amino acid sequence seemed to indicate that the protein complex shared a direct relationship with the cellulosome of Clostridium thermocellum. The crude enzyme from the strain BT14 showed effective degradation of plant biomass. When grown on corn hulls at pH 9.0 and $60^{\circ}C$ under anaerobic conditions, the strain BT14 produced ethanol and acetate as the main fermentation products.

• Journal of Microbiology and Biotechnology
• /
• v.23 no.2
• /
• pp.237-245
• /
• 2013

Canthaxanthin (cx) is a potent antioxidant that is chemically synthesized at the industrial scale and has imperative applications in the cosmetic and feed industries. An orange pigmented mesophilic bacterium, designated as K44, was isolated from soil samples of Kargil, India. Biochemical tests, 16S rRNA gene sequencing, and FAME analysis of the bacterium indicated it to belong in the genus Dietzia and is distinct from human isolates. The strain showed 98% 16S rRNA gene sequence homology with Dietzia maris DSM 43102. High-performance liquid chromatography profile of the pigments isolated from K44 showed two major peaks absorbing at 465.3 and 475 nm. The liquid chromatography-mass spectrometry (LC-MS) analysis of both these peaks revealed their m/z to be 564. The molecular weights, LC-MS/MS fragmentation patterns, and ${\lambda}_{max}$ of these fractions corresponded to all-trans- (475 nm) and 9-cis-(465.3 nm) cx isomers. The antioxidant activities of cis- and trans-cx isomers isolated from this bacterium were found to differ, where the cis-isomer showed higher free radical, superoxide radical, and reactive oxygen species scavenging activities than the alltrans- isomer, suggesting that 9-cis-cx is more effective as an antioxidant than the all-trans-cx.

• Journal of Ginseng Research
• /
• v.34 no.1
• /
• pp.41-46
• /
• 2010

Expensive herbs such as ginseng are always a possible target for fraudulent labeling. New mountain ginseng strains have occasionally been found deep within mountain areas and commercially traded at exorbitant prices. However, until now, no scientific basis has existed to distinguish such ginseng from commonly cultivated ginseng species other than by virtue of being found within deep mountain areas. Polymerase chain reaction (PCR) analysis of the internal transcribed spacer has been shown to be an appropriate method for the identification of the most popular species (Panax ginseng) in the Panax ginseng genus. A single nucleotide polymorphism (SNP) has been identified between three newly found mountain ginseng (KGD4, KGD5, and KW1) and already established Panax species. Specific PCR primers were designed from this SNP site within the sequence data and used to detect the mountain ginseng strains via multiplex PCR. The established multiplex-PCR method for the simultaneous detection of newly found mountain ginseng strains, Korean ginseng, and foreign ginseng in a single reaction was determined to be effective. This study is the first report of scientific discrimination of "mountain ginsengs" and describes an effective method of identification for fraud prevention and for uncovering the possible presence of other, cheaper ginseng species on the market.

• YAKHAK HOEJI
• /
• v.37 no.2
• /
• pp.129-135
• /
• 1993

Serratia sp. Y-4 was isolated from soil. Many characteristics of the strain and optimum cultivation condition for protease production were investigated.,The protease from Serratia sp. Y-4 was purified and studied for the properties of the enzyme. The isolated strain was identified to the genus Serratia. The strain was cultivated in 1%-casein, 0.5%-Na$_{3}$PO$_{4}$.7H$_{2}$O, 0.1%-NaCl, 0.05%-KCI, 0.02%-MgSO$_{4}$.7H$_{2}$O, 0.02%-CaCl$_{2}$.2H$_{2}$O, 0.02%-ZnSO$_{4}$.7H$_{2}$O, 0.02%-MnCl$_{2}$.4H$_{2}$O and 0.5%-soy bean oil at pH 7.0 for 35 hrs. The enzyme was purified about 5.89 fold from the culture broth with 31.1% recovery and 19,613 u/mg through ultrafiltration, ammonium sulfate, DEAE-sephacel and Superose-12 chromatography. The purified enzyme was identified as one band by isoelectric focusing, SDS- and native-PAGE. It has maxium activity at $37^{\circ}C$ and pH 9.0. Molecular weight of it is approx. 50 kD and pl is about 6.70. Its Km value for casein was 20 mg/ml. 5 mM-EDTA, 5mM-SDS, Ag$^{+1}$, Cu$^{+2}$, Hg$^{+2}$ and Pb$^{+2}$ inhibited the enzyme.

• Korean Journal of Plant Taxonomy
• /
• v.40 no.3
• /
• pp.179-182
• /
• 2010

We report S. caricina (R. Br) Benth. (Cyperaceae) as an unrecorded species from Sinan-gun, Jeollanam Province on the Korean peninsula. This taxon was known to be distributed mainly in southeast Asia, China, Japan, and the northern part of Australia. S. caricina is distinguished from other species of the genus Scleria in Korea by having congested inflorescences, 3-toothed pistillate scales at the apex, and enclosed achenes in 2 scales. The new Korean common name, 'Ae-gi-gae-ol-mi', is given considering the small-size of the plants. A description based on the morphological characters and the illustrations of this species are provided with a taxonomic key to the species of Scleria in Korea.

• Korean Journal of Plant Taxonomy
• /
• v.40 no.3
• /
• pp.186-191
• /
• 2010

Four unrecorded species (Barbella flagellifera, Isothecium hakkodense, Mnium orientale and Fissidens gardneri) and with one unrecorded genus, Barbella, are reported new to the Korean moss flora. B. flagellifera (Meteoriaceae) was found on a tree at alt. 300-350 m of parasitic Seogeomun-oreum Volcano on Jeju Island. The species are mainly distributed in subtropic regions. I. hakkodense (Lembophyllaceae) was found around the top of Seongin-bong on Ulleung Island. This species is similar to I. subdiversiforme, however, it can be distinguished by the morphologies of branch leaves and alar cells. M. orientale (Mniaceae) was collected from Mt. Jiri. This is similar to M. heterophyllum, however, it can be distinguished by plant size, number of teeth in leaf margin and cell size on leaf. F. gardneri (Fissidentaceae) was found along the valley of Mt. Palyeong, Jeollanam Province. This species is similar to F. obscurirete, but distinguished by the size of the plants and their leaves as well as the costal lengths of the leaves.

• Korean Journal of Plant Taxonomy
• /
• v.47 no.2
• /
• pp.112-118
• /
• 2017

Achillea alpina L. subsp. pulchra (Koidz.) Kitam., an unrecorded subspecies belonging to the genus Achillea of Asteraceae, was discovered and is illustrated here. It is known as an endemic species of Hokkaido, Japan, but we discovered it along the seashore at Uljin in Gyeongsangbuk-do, Korea. Having a relatively equally serrate or dentate leaf margin and sparsely villous involucres, this subspecies is easily distinguished from its related taxa. Based on its habitat, it was termed Gaet-top-pul in Korean. We provide a description, illustrations, photographs and a key of related taxa in Korea.