• Title/Summary/Keyword: Named Entity Extraction

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Answer Extraction Using Named Entity Feedback in Question Answering System (질의 응답 시스템에서 개체 피드백을 이용한 정답 추출)

  • 나승훈;강인수;이상율;이종혁
    • Proceedings of the Korean Information Science Society Conference
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    • 2002.10d
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    • pp.676-678
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    • 2002
  • 질의 응답 시스템(Question Answering: QA)에서 정답 유형 부류(Answer Type Taxonomy: ATT)란 사용자 질문 분석을 위한 미 부류 체계를 의미하는 것으로, ATT의 크기가 클수록 시스템의 성능은 높아진다. ATT를 확장하기 위해서는, 개체(Named Entity)에 의미 범주를 결정하는 개체 분류기(Named Entity Tagger의 분류 체계가 세분되어야 하는데, 기존의 개체 분류기는 한문서 내에서 그 개체의 분류를 시도하기 때문에, 분류를 위한 문맥 정보의 양이 부족하여, 정확하고 상세한 분류를 기대하기 힘들다. 본 논문에서는 동일 개체에 대한 문맥 정보를 수집하기 위해, 그 개체가 나타나는 다른 문서들을 검색하는 개체 피드백 Named Enti쇼 Feedback)이라는 기법을 사용한다. 개체가 상세히 분류됨에 따라 ATT도 확장될 수 있었으며, 이렇게 확장된 ATT상에서의 정답 추출은 baseline보다 약 7%정도의 성능 향상을 보여, 개체 피드백의 효과를 확인할 수 있었다.

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A Comparative Research on End-to-End Clinical Entity and Relation Extraction using Deep Neural Networks: Pipeline vs. Joint Models (심층 신경망을 활용한 진료 기록 문헌에서의 종단형 개체명 및 관계 추출 비교 연구 - 파이프라인 모델과 결합 모델을 중심으로 -)

  • Sung-Pil Choi
    • Journal of the Korean Society for Library and Information Science
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    • v.57 no.1
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    • pp.93-114
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    • 2023
  • Information extraction can facilitate the intensive analysis of documents by providing semantic triples which consist of named entities and their relations recognized in the texts. However, most of the research so far has been carried out separately for named entity recognition and relation extraction as individual studies, and as a result, the effective performance evaluation of the entire information extraction systems was not performed properly. This paper introduces two models of end-to-end information extraction that can extract various entity names in clinical records and their relationships in the form of semantic triples, namely pipeline and joint models and compares their performances in depth. The pipeline model consists of an entity recognition sub-system based on bidirectional GRU-CRFs and a relation extraction module using multiple encoding scheme, whereas the joint model was implemented with a single bidirectional GRU-CRFs equipped with multi-head labeling method. In the experiments using i2b2/VA 2010, the performance of the pipeline model was 5.5% (F-measure) higher. In addition, through a comparative experiment with existing state-of-the-art systems using large-scale neural language models and manually constructed features, the objective performance level of the end-to-end models implemented in this paper could be identified properly.

OryzaGP 2021 update: a rice gene and protein dataset for named-entity recognition

  • Larmande, Pierre;Liu, Yusha;Yao, Xinzhi;Xia, Jingbo
    • Genomics & Informatics
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    • v.19 no.3
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    • pp.27.1-27.4
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    • 2021
  • Due to the rapid evolution of high-throughput technologies, a tremendous amount of data is being produced in the biological domain, which poses a challenging task for information extraction and natural language understanding. Biological named entity recognition (NER) and named entity normalisation (NEN) are two common tasks aiming at identifying and linking biologically important entities such as genes or gene products mentioned in the literature to biological databases. In this paper, we present an updated version of OryzaGP, a gene and protein dataset for rice species created to help natural language processing (NLP) tools in processing NER and NEN tasks. To create the dataset, we selected more than 15,000 abstracts associated with articles previously curated for rice genes. We developed four dictionaries of gene and protein names associated with database identifiers. We used these dictionaries to annotate the dataset. We also annotated the dataset using pretrained NLP models. Finally, we analysed the annotation results and discussed how to improve OryzaGP.

A Collaborative Framework for Discovering the Organizational Structure of Social Networks Using NER Based on NLP (NLP기반 NER을 이용해 소셜 네트워크의 조직 구조 탐색을 위한 협력 프레임 워크)

  • Elijorde, Frank I.;Yang, Hyun-Ho;Lee, Jae-Wan
    • Journal of Internet Computing and Services
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    • v.13 no.2
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    • pp.99-108
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    • 2012
  • Many methods had been developed to improve the accuracy of extracting information from a vast amount of data. This paper combined a number of natural language processing methods such as NER (named entity recognition), sentence extraction, and part of speech tagging to carry out text analysis. The data source is comprised of texts obtained from the web using a domain-specific data extraction agent. A framework for the extraction of information from unstructured data was developed using the aforementioned natural language processing methods. We simulated the performance of our work in the extraction and analysis of texts for the detection of organizational structures. Simulation shows that our study outperformed other NER classifiers such as MUC and CoNLL on information extraction.

Development and Evaluation of Information Extraction Module for Postal Address Information (우편주소정보 추출모듈 개발 및 평가)

  • Shin, Hyunkyung;Kim, Hyunseok
    • Journal of Creative Information Culture
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    • v.5 no.2
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    • pp.145-156
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    • 2019
  • In this study, we have developed and evaluated an information extracting module based on the named entity recognition technique. For the given purpose in this paper, the module was designed to apply to the problem dealing with extraction of postal address information from arbitrary documents without any prior knowledge on the document layout. From the perspective of information technique practice, our approach can be said as a probabilistic n-gram (bi- or tri-gram) method which is a generalized technique compared with a uni-gram based keyword matching. It is the main difference between our approach and the conventional methods adopted in natural language processing that applying sentence detection, tokenization, and POS tagging recursively rather than applying the models sequentially. The test results with approximately two thousands documents are presented at this paper.

Feature Generation of Dictionary for Named-Entity Recognition based on Machine Learning (기계학습 기반 개체명 인식을 위한 사전 자질 생성)

  • Kim, Jae-Hoon;Kim, Hyung-Chul;Choi, Yun-Soo
    • Journal of Information Management
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    • v.41 no.2
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    • pp.31-46
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    • 2010
  • Now named-entity recognition(NER) as a part of information extraction has been used in the fields of information retrieval as well as question-answering systems. Unlike words, named-entities(NEs) are generated and changed steadily in documents on the Web, newspapers, and so on. The NE generation causes an unknown word problem and makes many application systems with NER difficult. In order to alleviate this problem, this paper proposes a new feature generation method for machine learning-based NER. In general features in machine learning-based NER are related with words, but entities in named-entity dictionaries are related to phrases. So the entities are not able to be directly used as features of the NER systems. This paper proposes an encoding scheme as a feature generation method which converts phrase entities into features of word units. Futhermore, due to this scheme, entities with semantic information in WordNet can be converted into features of the NER systems. Through our experiments we have shown that the performance is increased by about 6% of F1 score and the errors is reduced by about 38%.

Deep recurrent neural networks with word embeddings for Urdu named entity recognition

  • Khan, Wahab;Daud, Ali;Alotaibi, Fahd;Aljohani, Naif;Arafat, Sachi
    • ETRI Journal
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    • v.42 no.1
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    • pp.90-100
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    • 2020
  • Named entity recognition (NER) continues to be an important task in natural language processing because it is featured as a subtask and/or subproblem in information extraction and machine translation. In Urdu language processing, it is a very difficult task. This paper proposes various deep recurrent neural network (DRNN) learning models with word embedding. Experimental results demonstrate that they improve upon current state-of-the-art NER approaches for Urdu. The DRRN models evaluated include forward and bidirectional extensions of the long short-term memory and back propagation through time approaches. The proposed models consider both language-dependent features, such as part-of-speech tags, and language-independent features, such as the "context windows" of words. The effectiveness of the DRNN models with word embedding for NER in Urdu is demonstrated using three datasets. The results reveal that the proposed approach significantly outperforms previous conditional random field and artificial neural network approaches. The best f-measure values achieved on the three benchmark datasets using the proposed deep learning approaches are 81.1%, 79.94%, and 63.21%, respectively.

Construction of Test Collection for Extraction of Biomedical PLOT & Relations (생의학분야 PLOT 및 관계추출을 위한 테스트컬렉션 구축)

  • Choi, Yun-Soo;Choi, Sung-Phl;Jeong, Chang-Hoo
    • Proceedings of the Korea Contents Association Conference
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    • 2010.05a
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    • pp.425-427
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    • 2010
  • Large-scaled information extraction consists of named-entity recognition, terminology extraction and relation extraction. Since all the elementary technologies have been studied independently so far, test collections for related machine learning models also have been constructed independently. As a result, it is difficult to handle scientific documents to extract both named-entities and technical terms at once. In this study, we integrate named-entities and terminologies with PLOT(Person, Location, Organization, Terminology) in a biomedical domain and construct a test collection of PLOT and relations between PLOTs.

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Extending TextAE for annotation of non-contiguous entities

  • Lever, Jake;Altman, Russ;Kim, Jin-Dong
    • Genomics & Informatics
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    • v.18 no.2
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    • pp.15.1-15.6
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    • 2020
  • Named entity recognition tools are used to identify mentions of biomedical entities in free text and are essential components of high-quality information retrieval and extraction systems. Without good entity recognition, methods will mislabel searched text and will miss important information or identify spurious text that will frustrate users. Most tools do not capture non-contiguous entities which are separate spans of text that together refer to an entity, e.g., the entity "type 1 diabetes" in the phrase "type 1 and type 2 diabetes." This type is commonly found in biomedical texts, especially in lists, where multiple biomedical entities are named in shortened form to avoid repeating words. Most text annotation systems, that enable users to view and edit entity annotations, do not support non-contiguous entities. Therefore, experts cannot even visualize non-contiguous entities, let alone annotate them to build valuable datasets for machine learning methods. To combat this problem and as part of the BLAH6 hackathon, we extended the TextAE platform to allow visualization and annotation of non-contiguous entities. This enables users to add new subspans to existing entities by selecting additional text. We integrate this new functionality with TextAE's existing editing functionality to allow easy changes to entity annotation and editing of relation annotations involving non-contiguous entities, with importing and exporting to the PubAnnotation format. Finally, we roughly quantify the problem across the entire accessible biomedical literature to highlight that there are a substantial number of non-contiguous entities that appear in lists that would be missed by most text mining systems.

General Relation Extraction Using Probabilistic Crossover (확률적 교차 연산을 이용한 보편적 관계 추출)

  • Je-Seung Lee;Jae-Hoon Kim
    • KIPS Transactions on Software and Data Engineering
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    • v.12 no.8
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    • pp.371-380
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    • 2023
  • Relation extraction is to extract relationships between named entities from text. Traditionally, relation extraction methods only extract relations between predetermined subject and object entities. However, in end-to-end relation extraction, all possible relations must be extracted by considering the positions of the subject and object for each pair of entities, and so this method uses time and resources inefficiently. To alleviate this problem, this paper proposes a method that sets directions based on the positions of the subject and object, and extracts relations according to the directions. The proposed method utilizes existing relation extraction data to generate direction labels indicating the direction in which the subject points to the object in the sentence, adds entity position tokens and entity type to sentences to predict the directions using a pre-trained language model (KLUE-RoBERTa-base, RoBERTa-base), and generates representations of subject and object entities through probabilistic crossover operation. Then, we make use of these representations to extract relations. Experimental results show that the proposed model performs about 3 ~ 4%p better than a method for predicting integrated labels. In addition, when learning Korean and English data using the proposed model, the performance was 1.7%p higher in English than in Korean due to the number of data and language disorder and the values of the parameters that produce the best performance were different. By excluding the number of directional cases, the proposed model can reduce the waste of resources in end-to-end relation extraction.