• Title/Summary/Keyword: Morphology segmentation

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Automatic Segmentation of Lung, Airway and Pulmonary Vessels using Morphology Information and Advanced Rolling Ball Algorithm (형태학 정보와 개선된 롤링 볼 알고리즘을 이용한 폐, 기관지 및 폐혈관 자동 분할)

  • Cho, Joon-Ho
    • Journal of the Institute of Electronics and Information Engineers
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    • v.51 no.2
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    • pp.173-181
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    • 2014
  • In this paper, the algorithm that can automatically segment the lung, the airway and the pulmonary vessels in a chest CT was proposed. The proposed method is progressed in three steps. In the first step, the lung and the airway are segmented by the region growing law through the optimal threshold and three-dimensional labeling. In the second, from the start point to the first carina of the airway is segmented by the deduction operation, and the next airway of the bifurcations are segmented by applying a variable threshold technique. In the third step, the left/right lungs are divided by the restoration process for the lung, and the outside of lungs for abnormal is checked by applying the advanced rolling ball algorithm, and if abnormal is found, that part is removed, and it is restored to the normal lungs by connecting the outside of the lung in the form of second-order polynomial. Finally, pulmonary vessels are segmented by applying the three-dimensional connected component labeling method and three-dimensional region growing method. As the results of simulation, it could be confirmed that the pulmonary vascular is accurately divided without loss of tissue around lung.

Selection of Optimal Band Combination for Machine Learning-based Water Body Extraction using SAR Satellite Images (SAR 위성 영상을 이용한 수계탐지의 최적 머신러닝 밴드 조합 연구)

  • Jeon, Hyungyun;Kim, Duk-jin;Kim, Junwoo;Vadivel, Suresh Krishnan Palanisamy;Kim, JaeEon;Kim, Taecin;Jeong, SeungHwan
    • Journal of the Korean Association of Geographic Information Studies
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    • v.23 no.3
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    • pp.120-131
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    • 2020
  • Water body detection using remote sensing based on machine interpretation of satellite image is efficient for managing water resource, drought and flood monitoring. In this study, water body detection with SAR satellite image based on machine learning was performed. However, non water body area can be misclassified to water body because of shadow effect or objects that have similar scattering characteristic comparing to water body, such as roads. To decrease misclassifying, 8 combination of morphology open filtered band, DEM band, curvature band and Cosmo-SkyMed SAR satellite image band about Mokpo region were trained to semantic segmentation machine learning models, respectively. For 8 case of machine learning models, global accuracy that is final test result was computed. Furthermore, concordance rate between landcover data of Mokpo region was calculated. In conclusion, combination of SAR satellite image, morphology open filtered band, DEM band and curvature band showed best result in global accuracy and concordance rate with landcover data. In that case, global accuracy was 95.07% and concordance rate with landcover data was 89.93%.

Classification of Tumor cells in Phase-contrast Microscopy Image using Fourier Descriptor (위상차 현미경 영상 내 푸리에 묘사자를 이용한 암세포 형태별 분류)

  • Kang, Mi-Sun;Lee, Jeong-Eom;Kim, Hye-Ryun;Kim, Myoung-Hee
    • Journal of Biomedical Engineering Research
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    • v.33 no.4
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    • pp.169-176
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    • 2012
  • Tumor cell morphology is closely related to its migratory behaviors. An active tumor cell has a highly irregular shape, whereas a spherical cell is inactive. Thus, quantitative analysis of cell features is crucial to determine tumor malignancy or to test the efficacy of anticancer treatment. We use 3D time-lapse phase-contrast microscopy to analyze single cell morphology because it enables to observe long-term activity of living cells without photobleaching and phototoxicity, which is common in other fluorescence-labeled microscopy. Despite this advantage, there are image-level drawbacks to phase-contrast microscopy, such as local light effect and contrast interference ring. Therefore, we first corrected for non-uniform illumination artifacts and then we use intensity distribution information to detect cell boundary. In phase contrast microscopy image, cell is normally appeared as dark region surrounded by bright halo ring. Due to halo artifact is minimal around the cell body and has non-symmetric diffusion pattern, we calculate cross sectional plane which intersects center of each cell and orthogonal to first principal axis. Then, we extract dark cell region by analyzing intensity profile curve considering local bright peak as halo area. Finally, we calculated the Fourier descriptor that morphological characteristics of cell to classify tumor cells into active and inactive groups. We validated classification accuracy by comparing our findings with manually obtained results.

The Study of Pre-processing Algorithm for Improving Efficiency of Optical Flow Method on Ultrasound Image (초음파 영상에서의 Optical Flow 추적 성능 향상을 위한 전처리 알고리즘 개발 연구)

  • Kim, Sung-Min;Lee, Ju-Hwan;Roh, Seung-Gyu;Park, Sung-Yun
    • Journal of the Institute of Electronics Engineers of Korea SC
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    • v.47 no.5
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    • pp.24-32
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    • 2010
  • In this study, we have proposed a pre-processing algorithm newly developed for improving the tracking efficiency of the optical flow method. The developed pre-processing algorithm consists of a median filter, binarization, morphology, canny edge, contour detecting and an approximation method. In order to evaluate whether the optical flow tracking capacity increases, this study applied the pre-processing algorithm to the Lucas-Kanade(LK) optical flow algorithm, and comparatively analyzed its images and tracking results with those of optical flow without the pre-processing algorithm and with the existing pre-processing algorithm(composed of median filter and histogram equalization). As a result, it was observed that the tracking performance derived from the LK optical flow algorithm with the pre-processing algorithm, shows better tracking accuracy, compared to the one without the pre-processing algorithm and the one with the existing pre-processing algorithm. It seems to have resulted by successful segmentation for characteristic areas and subdivision into inner and outer contour lines.

The Extraction of ROI(Region Of Interest)s Using Noise Filtering Algorithm Based on Domain Heuristic Knowledge in Breast Ultrasound Image (유방 초음파 영상에서 도메인 경험 지식 기반의 노이즈 필터링 알고리즘을 이용한 ROI(Region Of Interest) 추출)

  • Koo, Lock-Jo;Jung, In-Sung;Choi, Sung-Wook;Park, Hee-Boong;Wang, Gi-Nam
    • Journal of Korean Society of Industrial and Systems Engineering
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    • v.31 no.1
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    • pp.74-82
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    • 2008
  • The objective of this paper is to remove noises of image based on the heuristic noises filter and to extract a tumor region by using morphology techniques in breast ultrasound image. Similar objective studies have been conducted based on ultrasound image of high resolution. As a result, efficiency of noise removal is not fine enough for low resolution image. Moreover, when ultrasound image has multiple tumors, the extraction of ROI (Region Of Interest) is not accomplished or processed by a manual selection. In this paper, our method is done 4 kinds of process for noises removal and the extraction of ROI for solving problems of restrictive automated segmentation. First process is that pixel value is acquired as matrix type. Second process is a image preprocessing phase that is aimed to maximize a contrast of image and prevent a leak of personal information. In next process, the heuristic noise filter that is based on opinion of medical specialist is applied to remove noises. The last process is to extract a tumor region by using morphology techniques. As a result, the noise is effectively eliminated in all images and a extraction of tumor regions is possible though one ultrasound image has several tumors.

A Segmented Morphology Filter for Airborne LiDAR Data (Airborne LiDAR 필터에 관한 연구)

  • Choi, Seung-Sik;Song, Nak-Hyeon;Cho, Woo-Sug
    • Journal of the Korean Society of Surveying, Geodesy, Photogrammetry and Cartography
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    • v.25 no.1
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    • pp.55-62
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    • 2007
  • Recent advances in airborne LiDAR technology allow rapid and inexpensive measurements of topography over large areas. The generation of DTM/DEM is essential to numerous applications such as the fields of civil engineering, environment, city planning and flood modeling. The demand for LiDAR data is increasing due to the reduced cost for DTM generation and the increased reliability, precision and completeness. In order to generate DTM, measurements from non-ground features such as building and vegetation have to be classified and removed. In this paper, a segmented morphology filter was developed to detect non-ground LiDAR measurements. First, segments LiDAR point clouds based on the elevation. Secondly classifies those protruding segments into non-ground points. Those non-ground points such as building and vegetation are removed, while ground points are preserved for DTM generation. For experiments, data sets used in Comparison of Filters (ISPRS, 2003) depicting urban and rural areas were selected. The experimental results show that the proposed filter can remove most of the non-ground points effectively with less commission and omission errors.

Traffic Sign Area Detection by using Color Rate and Distance Rate (컬러비와 거리비를 이용한 교통표지판 영역추출)

  • Kwak, Hyun-Wook;Lee, Woo-Beom;Kim, Wook-Hyun
    • The KIPS Transactions:PartB
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    • v.9B no.5
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    • pp.681-688
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    • 2002
  • This paper proposes a system detecting the area of traffic sign, which uses color rate as the information of colors, and corner point and distance rate as the information of morphology. In this system, a candidate area is extracted by performing dilation operation on the binary image made by the color rate of R, G, B components and by detecting corner point and center point through mask. The area of traffic sign with varied shapes is extracted by calculating the distance rate from center point, which is the information of morphology. The results of this experiment demonstrate that in this system which is invariable regardless of its size and location, it is possible to extract the exact area from varied traffic signs such as the shapes of triangle, circle, inverse triangle, and square as well as from the images at both day and night when brightness value is greatly different. Moreover, it demonstrates great accuracy and speed in processing.

A Study on Face Object Detection System using spatial color model (공간적 컬러 모델을 이용한 얼굴 객체 검출 시스템 연구)

  • Baek, Deok-Soo;Byun, Oh-Sung;Baek, Young-Hyun
    • 전자공학회논문지 IE
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    • v.43 no.2
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    • pp.30-38
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    • 2006
  • This paper is used the color space distribution HMMD model presented in MPEG-7 in order to segment and detect the wanted image parts as a real time without the user's manufacturing in the video object segmentation. Here, it is applied the wavelet morphology to remove a small part that is regarded as a noise in image and a part excepting for the face image. Also, it did the optimal composition by the rough set. In this paper, tile proposed video object detection algorithm is confirmed to be superior as detecting the face object exactly than the conventional algorithm by applying those to the different size images.put the of paper here.

Mobile Application based on Image Processing and a Proportion for Food Intake Measuring

  • Kim, Do-Hyeon;Kim, Yoon;Han, Yu-Ri
    • Journal of the Korea Society of Computer and Information
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    • v.22 no.5
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    • pp.57-63
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    • 2017
  • In the paper, we propose a new reliable technique for measuring food intake based on image automatically without user intervention. First, food and bowl image before and after meal is obtained by user. The food and the bowl are divided into each region by the K-means clustering, Otsu algorithm, Morphology, etc. And the volume of food is measured by a proportional expression based on the information of the container such as it's entrance diameter, depth, and bottom diameter. Finally, our method calculates the volume of the consumed food by the difference between before and after meal. The proposed technique has higher accuracy than existing method for measuring food intake automatically. The experiment result shows that the average error rate is up to 7% for three types of containers. Computer simulation results indicate that the proposed algorithm is a convenient and accurate method of measuring the food intake.

A new species of Afrolaophonte (Copepoda, Harpacticoida, Laophontidae) from Korea and cladistic tests of species-groups

  • Tomislav, Karanovic
    • Journal of Species Research
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    • v.11 no.4
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    • pp.239-252
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    • 2022
  • Afrolaophonte koreana sp. nov. is described from the intertidal zone of two sandy beaches on the south coast of Korea. This is the first record of the genus Afrolaophonte Chappuis, 1960 in the Northern Pacific. The new species is most similar to A. aequatorialis Cottarelli and Mura, 1981, described from the Maldives and subsequently also found in Papua New Guinea, but could be distinguished by numerous characters, including the segmentation of the third leg endopod in male, armature formula of the second leg in both sexes, length of caudal rami in both sexes, and length of some setae on the fourth leg in female. Afrolaophonte ensiger Wells and Rao, 1987 from the Andaman and Nicobar Islands is established as a junior subjective synonym of A. aequatorialis. To test previous phylogenetic hypotheses based on intuitive methods, a parsimony based cladistic analysis of 13 valid congeners is performed using 15 morphological characters and one outgroup. Only one of three previously proposed species-groups is supported with a synapomorphy, while one was clearly based on symplesiomorphies. Our current knowledge of morphology in this genus is not sufficient for postulating interspecific phylogenies, which also renders previous zoogeographical hypotheses untestable.