• 제목/요약/키워드: Mix-species

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Comparison of Seven Commercial TaqMan Master Mixes and Two Real-Time PCR Platforms Regarding the Rapid Detection of Porcine DNA

  • Kang, Soo Ji;Jang, Chan Song;Son, Ji Min;Hong, Kwang Won
    • 한국축산식품학회지
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    • 제41권1호
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    • pp.85-94
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    • 2021
  • A pig-specific real-time PCR assay based on the mitochondrial ND5 gene was developed to detect porcine material in food and other products. To optimize the performance of assay, seven commercial TaqMan master mixes and two real-time PCR platforms (Applied Biosystems StepOnePlus and Bio-rad CFX Connect) were used to evaluate the limit of detection (LOD) as well as the PCR efficiency and specificity. The LODs and PCR efficiencies for the seven master mixes on two platforms were 0.5-5 pg/reaction and 84.96%-108.80%, respectively. Additionally, non-specific amplifications of DNA from other animal samples (human, dog, cow, and chicken) were observed for four master mixes. These results imply that the sensitivity and specificity of a real-time PCR assay may vary depending on master mix and platform used. The best combination of master mix and real-time PCR platform can accurately detect 0.5 pg porcine DNA, with a PCR efficiency of 100.49%.

토양시드뱅크에 의한 식생복원 가능성에 관한 연구 (A Study on the Potential Contribution of Soil Seed Bank to the Revegetation)

  • 고정현
    • 한국환경복원기술학회지
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    • 제10권6호
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    • pp.99-109
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    • 2007
  • The main objectives of this comparative study were 1) to compare the floristic similarity of species composition between the extant vegetation and seedlings from soil seed bank and 2) to quantify the potential contribution of soil seed bank to revegetation of forest in a constructed area, which is called "ecological impact mitigation" in conjunction with the power plant extension. Forest topsoil of seven plots was collected from the surface soil after measurements were taken on the ground vegetation in each plot. A greenhouse experiment was conducted and monitored to analyze the germination potential of soil seed bank. The forest topsoil was spread on plastic trays ($0.7m^2{\times}7$) filled with a 5cm layer of sterilized potting mix. The results of monitoring for 2 years in a greenhouse were as follows : 1) seedlings of soil seed bank per 4.9$m^2$ were 1,269 with 36 species (1st year) and 2,615 with 25 species (2nd year). 2) 38${\pm}$8% of the flora species were germinated from soil seed bank. It can be concluded that the use of soil seed bank would be effective to promote establishment of diverse species and vegetation. However, it behooves to continue monitoring on succession of vegetation and pursue revegetation with other methods for ecological restoration. Finally, adequate topsoil deposit and gathering methods should be studied properly.

Enhancement of flood stress tolerance for upland-adapted cereal crops by the close mixed-planting with rice

  • Iijima, Morio;Awala, Simon K;Hirooka, Yoshihiro;Yamane, Koji
    • 한국작물학회:학술대회논문집
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    • 한국작물학회 2017년도 9th Asian Crop Science Association conference
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    • pp.44-44
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    • 2017
  • Recently, the occurrences of extreme flooding and drought, often in the same areas, have increased due to climate change. We tested the hypothesis that wetland species could help upland species under flood conditions; that is, the roots of wetland crops may supply $O_2$ to the roots of upland crops by a series of experiments conducted in both humid Japan and semi-arid Namibia (See Iijima et al, 2016 and Awala et al, 2016). Firstly, flooding tolerance of upland-adapted staple crops-pearl millet (Pennisetum glaucum) and sorghum (Sorghum bicolor) mix-cropped with rice (Oryza spp.) was investigated in glasshouse and laboratory experiments in Japan. We found a phenomenon that strengthens the flood tolerance of upland crops when two species-one wetland and one drought tolerant-were grown using the mixed cropping technique that results in close tangling of their root systems, hereinafter referred to "close mixed-planting". This technique improved the photosynthetic and transpiration rates of the upland crops subjected to flood stress ($O_2$-deficient nutrient culture). Oxygen transfer was suggested between the two plants mix-cultured in water, implying its contribution to the phenomenon that improved the physiological status of upland crops under the simulated flood stress. Secondly, we further tested whether this phenomenon would be expressed under field flood conditions. The effects of close mixed-planting of pearl millet and sorghum with rice on their survival, growth and grain yields were evaluated under controlled field flooding in semi-arid Namibia during 2014/2015-2015/2016. Single-stand and mixed plant treatments were subjected to 11-22 day flood stress at the vegetative growth stage. Close Mixed-planting increased seedling survival rates in both pearl millet and sorghum. Grain yields of pearl millet and sorghum were reduced by flooding, in both the single-stand and mixed plant treatments, relative to the non-flooded upland yields, but the reduction was lower in the mixed plant treatments. In contrast, flooding increased rice yields. Both pearl millet-rice and sorghum-rice mixtures demonstrated higher land equivalent ratios, indicating a mixed planting advantage under flood conditions. These results indicate that mix-planting pearl millet or sorghum with rice could alleviate flood stress on dryland cereals. The results also suggest that with this cropping technique, rice could compensate for the dryland cereal yield losses due to field flooding. Mixed cropping of wet and dryland crops is a new concept to overcome flood stress under variable environmental conditions.

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Controlling Sacbrood Virus Disease in Apis cerana Colonies with Biological Methods in Korea

  • Vung, Nguyen Ngoc;Kim, Iksoo;Lee, Man Young;Kim, Hye Kyung;Kim, Dong Won;Choi, Yong Soo
    • 한국양봉학회지
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    • 제33권4호
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    • pp.283-295
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    • 2018
  • As Sacbrood virus (SBV), a causative agent of larval death and colony collapse in Apis cerana honey bee, is prevalent and poses one of the most significant threats to the Korean apiculture, development of methods to counter this viral disease is urgently needed. In this study we tested some SBV controlling methods, such as requeen, shook swam, adding Apis mellifera and spraying yogurt to SBV inoculated colony. Colony size measured by number of sealed brood and adult were evaluated every 15 days until two months while instances of recurrence were recorded up to five months after applying treatment methods. We also test the effects of yogurt on healthy and SBV-infected larvae at both in vitro reared larvae and colony level. Our result showed that all SBV controlling methods had similar success rates with respect to elimination of SBV clinical symptom up to 30 days post treatment. Mix-species and spraying yogurt method had similar pattern of sealed brood and adult number and higher than that of other SBV controlling methods up to 45 days post treatment. These two groups also showed the lower percentage of SBV recurrence (50% and 66.7%) at 120 days post treatment than other group that mostly colony had clinical symptom. Result on in vitro reared larvae challenged with yogurt showed that yogurt have neither harmless on healthy larvae nor remedial effect on SBV infected larvae. However, at colony level, colony in group received yogurt treatment removed significantly more SBV-infected larvae, SBV-killed larvae, and even healthy larvae in comparison to the control, suggested that yogurt could trigger the hygienic behavior of nurse bee. Our results recommended that it is practical in beekeeping by adding A. mellifera and spraying yogurt to control SBV in A. cerana colony.

국내산 야채쥬스의 역병균 영양생장 및 생식생장용 배양기 이용 (Utilization of Domestic Vegetables Juices as a Medium for Growth and Reproduction of Phytophthora species)

  • 지형진;조원대;최용철
    • 한국식물병리학회지
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    • 제14권4호
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    • pp.299-302
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    • 1998
  • V8 juice agar (V8A) has been the most popular and commonly used medium for growth and reproduction of Phytophthora. However, frequently V8 vegetable juice is not available or difficult to obtain in Korea. We therefore developed widely accessible medium to substitute for V8A using domestically available five juices; two carrot (KCJA), two tomato (KTJA) and a vegetable-mix (KVMA). To prepare 10% juice medium, each vegetable juice 100 ml, DW 900 ml, agar 17 g and Ca CO3 0.5∼1.0g were supplemented to adjust pH ca. 6.0 Mycelial growth of P. cactorum and P. capsici on KTJA and KVMA was equally effective as V8A for the growth of P. cactorum, P. capsici, P. drechsleri and P. nicotianae under light. Sporangial production of P cactorum, P. capsici and P. nicotianae on KTJA and KVMA was as good as V8A and slightly better than CKJA, but the difference was insignificant by P. cactorum and P. nicotianae. The four fungi successfully formed oospores on all the media although the numbers were varied among species and media. While KTJA was the best for P. cactorum and P. capsici, V8A was the best for P. capsici and P. drechsleri. However, KCJA stimulated highest number of oopspores of P. nicotianae. Overall results showed that domestically available vegetable juices were highly effective on growth and reproduction of Phytophthora and comparable to V8 juice. Therefore, the domestic juice medium can be successfully replaced V8A in Phytophthora study.

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국산재와 요소수지접착제로 제조된 Com-Ply의 평가 (Evaluation of Com-Ply from Domestic Logs and Urea-Formaldehyde Resin Adhesive)

  • 오용성;김종인
    • 한국산림과학회지
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    • 제96권1호
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    • pp.54-57
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    • 2007
  • 요소수지접착제를 합판제조용 접착제와 유사하게 실험실에서 합성하고, 합성한 요소수지접착제를 증량제, 충전제, 산경화촉매제와 혼합하였다. 요소수지접착제 혼합물의 고형분량은 56.1%이고, 물은 43.9%였다. 국산재와 요소수지접착제 혼합물로 5종류의 Com-Ply를 제조하고, KS F 3101 보통합판의 인장 전단 접착력 시험 및 KS F 3104 파티클보드의 휨파괴계수 시험을 수행했다. 성능 평가된 결과는 제조된 5종류의 Com-Ply에서 모두 적합한 결과를 보여줬다. 이런 결과는 본 연구에서 사용된 요소수지접착제 혼합물이 국산재 Com-Ply제조에 적합하다는 것이다.

호안 녹화용 매트 시공 후 식생변화 모니터링 - 성남시 탄천을 중심으로 - (Monitoring Vegetation Changes after Constructing the Vegetation-mat Measures for Greening in Embankment - A Case Study of Tancheon, Seongnam -)

  • 이수동;강현경;장한솔
    • 한국환경생태학회지
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    • 제24권3호
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    • pp.302-317
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    • 2010
  • 본 연구는 탄천내 기존 콘크리트 호안블럭을 제거하지 않고 호안녹화용 매트를 적용하여 경관개선 및 생물서식기반을 조성하고자 하는 지역의 복원 효과 확인 및 관리방안을 제안하고자 하였다. 모니터링 결과 식물상은 2006년 18과 38종 3변종 총 41종류, 2007년 19과 56종 3변종 총 59종류, 2008년 29과 59종 8변종 총 64종류로 매년 식물종이 증가하고 있었다. 식물상 분포의 특징은 공법 적용지를 중심으로 식재한 물억새, 수크령 등이 세력을 형성하고 있었으며 범람시 토사 퇴적으로 자생종 중심의 다양한 종이 출현하고 있어 생태적으로 양호한 상태이었다. 현재는 자생종이 우점하고 있었으나 주기적인 범람에 의한 교란 유발 종과 외래종의 증가가 예상되므로 장기모니터링을 통해 관리가 이루어져야 양호한 수변생태계가 형성될 수 있을 것이다. 결국 하천천이 초기식생과 교란지 식생이 혼재되어 나타나는 생육양상이었다. 이와 같은 호안 녹화용 식생매트 공법은 콘크리트를 제거하지 않고 상부에 코이어 매트를 포설하여 불량경관을 개선할 수 있을 뿐만 아니라 식물생육의 기반을 제공하여 계속적인 식물종의 증가에 따른 종다양성을 확보하는데 효과가 있는 것으로 분석되었다.

장수만 식물플랑크톤 군집의 시.공간적 분포 특성 (Spatio-temporal Distribution of Phytoplankton Community in the Jangsu Bay and Adjoining Sea of South Sea, Korea)

  • 윤양호
    • 환경생물
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    • 제32권1호
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    • pp.75-87
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    • 2014
  • 한국 남해안의 중앙부에 위치하는 장수만의 식물플랑크톤 군집의 시 공간적 분포특성과 생물해양학적 환경특성을 파악하기 위한 현장 조사를 2006년 봄부터 겨울까지 계절별로 장수만과 인근해역을 대상으로 하는 31개의 정점의 표 저층 해수를 대상으로 실시하였다. 장수만에서 출현이 확인된 식물플랑크톤은 47속 83종으로 규조류가 65.1%, 와편모조류가 30.1%를 차지하였고, 유해성 조류도 3종 출현하였다. 세포밀도로 표시한 식물플랑크톤 현존량은 봄 3.1 $cells{\cdot}mL^{-1}$에서 겨울 521.0 $cells{\cdot}mL^{-1}$의 범위로 겨울과 여름에 높고, 봄과 가을에 낮았다. 현존량은 정점 평균으로 표층에서 봄 7.6 $cells{\cdot}mL^{-1}$, 여름 68.0 $cells{\cdot}mL^{-1}$, 가을 8.1 $cells{\cdot}mL^{-1}$, 그리고 겨울은 220.2 $cells{\cdot}mL^{-1}$를 나타내었다. 표층에서 우점종은 봄에 Chaetoceros affinis, Paralia sulcata, Bacillaria paxillifera, 여름에 Chaetoceros didymus, Ch. affinis, Octactis octonaria, 가을에 Skeletonema costatum 유사종과 B. paxillifera이 10% 이상의 우점률을 나타내었고, 겨울은 S. costatum 유사종에 의해 극우점 되었다. 주성분분석에 의한 장수만의 생물해양학적 특성은 봄과 여름의 수온 상승기에는 봇돌바다 등 개방해역에서 유입되는 해수 영향으로 높은 생물생산을 유지하고 있고, 가을과 겨울의 수온 하강기에는 생물량은 수심의 얕은 천해해역에서 높고, 현존량은 수로부에서 높은 밀도를 나타내었다. 특히 겨울은 해수 혼합의 원활한 천해해역에 높은 식물플랑크톤 생산을 나타내었다.

Kojic Acid에 의해 유기된 Chinese Hamster 난소세포의 염색체 변이 (Chromosomal Aberrations in Chinese Hamster Ovary Cells Induced by Kojic Acid)

  • Lee, Yang-Soon;Wei, Cheng-I
    • 한국식품영양과학회지
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    • 제21권4호
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    • pp.454-459
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    • 1992
  • 수종의 Aspergillus속 및 Penicillium속 균이 생산하는 진균대사 산물인 kojic acid가 독성분해 활성제의 첨가유무에 관계없이 Chinese hamster 난소세포에 염색체 변이를 일으키는 것이 확인되었다. Kojic acid 처리량의 증가에 따라 염색체 변이 또한 증가되었다. Kojlc acid의 잠재독성에 관한 본 실험결과에 기초해 이는 일종의 변이 유기체로 추정되며 현재로는 식품첨가제로서의 사용에 문제가 있는 것으로 사료된다.

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이종의 식특성 "바이러스"의 합성기작에 관하여

  • 김은순
    • Journal of Plant Biology
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    • 제5권3호
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    • pp.30-36
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    • 1962
  • The mechanism of synthesis of the toacco mosaic virus(TMV) and the potato virus X(PVX) was investigated using the methods of ultraviolet light irradiation and serological analysis. In vitro irradiation of UV on the infected tobacco juice for 10 minutes caused the infectivity of TMV and PVX to decrease markedly on their respective local lesion indicator hosts, Nicotiana glutinosa L. and Gomphrena globosa L., indicating that UV destroys directly the infectivity of the virus particles. Ten minutes after the UV was irradiated on the leaves of the two indicator hosts before inoculation, the infectivity of TMV decreased as it was irradiated in vitro, whereas that of PVX increased by 26% as compared with the unirradiated control. When the two viruses were mix-inoculated in the common host of tobacco and the synthetic products were analyzed by serological methods for a two week infection period, it was found that both viruses were multiplying more rapidly and abundantly than they were singly inoculated into the same host species. Titers from mixed series were often two times as high as those of singly inoculated series. A mechanism of competition in the synthesis between the mixed viruses in the common host is postulated.

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