• Title/Summary/Keyword: Microcystis

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Classification of algae in watersheds using elastic shape

  • Tae-Young Heo;Jaehoon Kim;Min Ho Cho
    • Communications for Statistical Applications and Methods
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    • v.31 no.3
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    • pp.309-322
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    • 2024
  • Identifying algae in water is important for managing algal blooms which have great impact on drinking water supply systems. There have been various microscopic approaches developed for algae classification. Many of them are based on the morphological features of algae. However, there have seldom been mathematical frameworks for comparing the shape of algae, represented as a planar continuous curve obtained from an image. In this work, we describe a recent framework for computing shape distance between two different algae based on the elastic metric and a novel functional representation called the square root velocity function (SRVF). We further introduce statistical procedures for multiple shapes of algae including computing the sample mean, the sample covariance, and performing the principal component analysis (PCA). Based on the shape distance, we classify six algal species in watersheds experiencing algal blooms, including three cyanobacteria (Microcystis, Oscillatoria, and Anabaena), two diatoms (Fragilaria and Synedra), and one green algae (Pediastrum). We provide and compare the classification performance of various distance-based and model-based methods. We additionally compare elastic shape distance to non-elastic distance using the nearest neighbor classifiers.

Recent changes in the phytoplankton community of Soda Lake Chitu, Ethiopia, in response to some environmental factors

  • Demtew Etisa;Yiglet Mebrat
    • Fisheries and Aquatic Sciences
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    • v.27 no.1
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    • pp.23-34
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    • 2024
  • While scientific information on the spatial variation of soda lake Microalgae is important to limnological studies, little information was reported from the Ethiopian Rift Valley Lake, Lake Chitu. This study aimed to understand the spatial distribution of the dominant Microalgae taxa in Lake Chitu, Ethiopia. The collection of samples and in situ measurements of some physico-chemical parameters were recorded at three sites for one cycle in November 2021. Fourteen species or genera of Microalgae were identified. Among those, Bacillariophyta were the most important with regard to species abundance and the rarest in species richness. Cyanophyta were the second-most important group in terms of species richness and rarity. Comparatively, all microalgae taxa were rare at both the anthropogenic areas (AA) and the flooding area (FA), which could be mainly due to intensive human and animal intervention and associated with extreme turbidity. Among Cyanophyta, Chroococcus minutus, Microcystis aeruginosa, and Spirulina platensis/fusiformis were predominant at both AA and FA, revealing their adaptation to less clear water and pollution. But S. platensis/fusiformis attained the highest abundance at the FA, indicating their preference for water in a highly nutrient-enriched area. We concluded that the spatial variation of microalgae diversity in relation to water quality parameters has implications for the importance of microalgae as a baseline indicator of water quality assessment tools in lakes.

Algal Growth Potential Test (AGPT) in Streams and Embayment of the Okchon Stream Watershed, Korea (옥천천 유역의 하천과 만곡부에서 조류 생장 잠재력 측정)

  • Sin,Jae-Gi;Kim,Dong-Seop;Lee,Hye-Geun;Maeng,Seung-Jin;Hwang,Sun-Jin
    • ALGAE
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    • v.18 no.2
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    • pp.169-176
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    • 2003
  • Algal growth potential test (AGPT) bioassay were conducted to evaluate the stream and reservoir water in the Okchon Stream Watershed during May to September 2002. The water quality of the stream water was clean in the upstream, deteriorating toward the downstream. In particular, SRP and $NH_4$ significantly increased due to treated wastewater. The average AGPT value of the Okchon Stream watershed was 22.4 mg dw ${\cdot}l^{-1}$, with the range of 0- 195.7 mg dw ${\cdot}l^{-1}$. AGPT value was the highest immediately after inflow of treated wastewater, averaging 91.3 mg dw${\cdot}l^{-1}$. AGPT was highly correlated with SRP, $NH_4$ and TIN factors, with P having the greatest effect on the growth of algae. Among N components, $NH_4$ was preferred to $NO_3$ for the growth of algae. Likewise, AGPT was closely linked to meteological and hydrological effects and development of natural phytoplankton. In survey stations, mesotrophic, eutrophic and hypertrophic conditions accounted for 43%, 21% and 36%, respectively. On the other hand, hypertrophic condition focused on the downstream reaches. AGPT was useful in determining not only the limiting nutrients but also the water fertility for the growth of algae. Based on the AGPT results, the management of point sources for water pollution in treated wastewater was important in the protection of aquatic environment in the stream and embayment.

Phytoplankton Community Dynamics and Evaluation of Trophic State in the Lake Unmoon (운문호의 식물플랑크톤 군집동태와 영양단계 평가)

  • Seo,Jeong-Gwan;Yu,Jae-Jeong;Lee,Jae-Jeong;Yang,Sang-Yong;Jeong,Ik-Gyo
    • ALGAE
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    • v.18 no.2
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    • pp.135-143
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    • 2003
  • The seasonal dynamics of phytoplankton and trophic state were evaluated weekly at three sites in the Lake Unmoon from May to November 2001. The seasonal succession pattern of phytoplankton community in the Lake Unmoon showed that the dominant species were; i) diatoms during the late spring, ii) dinoflagellates in June, iii) blue green algae, diatoms and dinoflagellates in July, iv) green algae and blue green algae in August, v) blue green algae in September and early November, and vi) diatoms in November. Members of Microcystis were dominant from middle August to late October and members of Aulocoseira appeared as important species in autumn in the Lake Unmoon. The concentration of chlorophyll-a ranged from 2.4 to 23.0 mg ${\cdot}m^{-3}$ (average: 8.6 mg ${\cdot}m^{-3}$) during the study period. Concentrations of total phosphorus were high during the period from July to November with the maximum of 0.028 mg ${\cdot} l^{-1}$. The average N/P ratio was 121, indicating that concentrations of phosphorus may determine the high algal biomass in the Lake Unmoon. Concentrations of silicate were higher in the Lake Unmoon (average value: 10.016 mg ${\cdot}$ l-) than in other lakes (average values: 1.074-4.408 mg ${\cdot}$ l-), suggesting high potential of diatom growth. The average trophic state index in the Lake Unmoon was 52, which was close to eutrophic state, and the trophic state trend was increasing steadily since 1999.

A study on the management and improvement of alert system according to algal bloom in the Daecheong Reservoir (대청호 조류발생에 따른 경보제 운영 및 개선 방안 고찰)

  • Jeong, Dong-Hwan;Lee, Jaejeong;Kim, Kyoyoung;Lee, Daehee;Hong, Sunhwa;Yoon, Johee;Hong, Sukyoung;Kim, Taeseung
    • Journal of Environmental Impact Assessment
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    • v.20 no.6
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    • pp.915-925
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    • 2011
  • Following the industrialization and urbanization in Korea, algal bloom causes aesthetic displeasure and many other problems such as taste and odor, coloration, scum, increase in pH, filter-bed blockage. There were some cases involving human death by microcystins during summertime in foreign countries. In Korea, Harmful cyanobacteria such as Microcystis and Anabaena develop in summer in the Daecheong reservoir, one of the main water resources, with the retention time of above 200 days. To better control algal bloom, the Ministry of Environment has been running algal bloom alert system from 1998 for the Daecheong reservoir, which needs to be improved to reflect the characteristics of river-type lakes. For this reason, we try to find new measures to improve an algal bloom alert system for each water zone considering the characteristics of harmful cyanobacteria in this study.

Dynamics of Phytoplankton Communities of Major Dam Reservoirs in Han River System (한강 수계 주요 인공댐호의 식물플랑크톤 군집 동태)

  • Youn, Seok Jea;Park, Hae-Kyung;Shin, Kyoungae
    • Journal of Korean Society on Water Environment
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    • v.26 no.2
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    • pp.317-325
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    • 2010
  • This study was to investigate phytoplankton communities and to evaluate the effects of hydrological and physical-chemical environmental factors in major five dam reservoirs in the Han River water system. Annual average of chlorophyll a concentration in Lake Paldang, Lake Cheongpyeong and Lake Doam was higher than that of Lake Chungju and Lake Hoengseong. The opposite seasonal variation patterns of phytoplankton growth were observed in dam reservoirs; the highest biomass in spring of dry season in Lake Paldang, Lake Cheongpyeong which are the river-type reservoirs and Lake Doam where turbidity was high throughout the year, and in summer and autumn of rainy season in Lake Chungju and Lake Hoengseong which are the lake-type reservoirs, indicating that the seasonal pattern for growth of phytoplankton in on-river reservoirs is mainly determined by hydrologic characteristics. The dominant species of phytoplankton in Lake Paldang, Lake Cheongpyeong and Lake Doam, where the concentration of nutrients was relatively high, were Bacillariophyceae such as Stephanodiscus hantzschii, Aulacoseira granulata var. angustissima in Lake Paldang and Lake Cyeongpyeong and Nitzschia spp. in Lake Doam throughout all season. The dominant species of phytoplankton in Lake Chungju and Lake Hoengseong which showed the oligo-mesotrophic state, were Bacillariophyceae such as Stephanodiscus hantzschii, Cyclotella pseudostelligera in spring and winter, but Cyanophyceae such as Microcystis spp. in summer.

Removal and Growth Inhibition of Red-tide Organisms by Blue-Min Treatment (블루민의 적조생물 제거와 생장저해능)

  • Gwak, Seung-Kuk;Jung, Min-Kyung;Lee, Eun-Ki;Cho, Kyung-Je
    • ALGAE
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    • v.19 no.1
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    • pp.7-14
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    • 2004
  • Blue-Min was initially developed as an adsorbent for harmful gas removal and recently improved to apply to livestock, agriculture and aquaculture as an assistant feed. In the Blue-Min treatment, growth of harmful algae (Cochlodinium polykrikoides and the others causing the red-tide in the ocean) were inhibited below 10% in comparison with control and coagulation removal of harmful alge with Blue-Min treatment was more efficient than that of yellow loess treatment. It would be expected that the Ble-Min can be useful for the extirpator against the red-tide organisms and restrain the toxic algal growth around the fish aquaculture using the assistant feed. Recently, its utility has become to be diverse as it was revealed that aquaculture productivity increase by its application and, in addition, that it improve the water quality or sediment conditions in the aquaculture of Chinese White Shrimp. When Blue-Min was treated with the proper dose, the growth inhibition of Microcystis aeruginosa and lsochrysis galbana, which are typical red-tide organisms in freshwaters and food organisms in aquaculture, respectively, were less than that of marine red-tide organisms, while their growth slightly increased with low concentration treatiment. In addition, polyunsaturated fatty acids (PUFA) content of I. galbana slightly increase with the Blue-Min treatment. Through our research, the Blue-Min has diverse and comples function against various biological organisms and is proved as a biological activator or depressor.

Environmental Studies in the Lower Part of the Han River -VII. Long Term Variations and Prospect of the Phytoplankton Community- (한강하류의 환경학적 연구 -VII. 식물플랑크톤군집의 장기간 변화와 전망-)

  • Lee, Jin-Hwan;Jung, Seung-Won
    • ALGAE
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    • v.19 no.4
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    • pp.321-327
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    • 2004
  • The literature review on the dynamics of the phytoplankton communities in terms of species composition, standing crops, abundant species and dominant species in the lower part of the Han River from 1940s to 2000s was conducted for the prospective prediction of their succession patterns. Total of 326 taxa were identified and they belonged to 47 blue-green algae, 139 green algae, 12 euglenoids, 126 diatoms, 6 din flagellates and 2 silicoflagellates. Composition of phytoplankton communities were 83.6% diatoms, 10.5% blue-green algae and 5.3% green algae in the middle of 1960s, whereas those were 43.2% diatoms, 40.7% green algae and 13.6% blue-green algae in the 1990s. Before 1990s, Synedra ulna, Melosira varians, Cymbella tumida, Synedra acus, Cymbella ventricosa, Navicula cryptocephala, Nitzschia palea, Aulacoseira granulata, Gomphonema parvulum and Cymbella affinis were most frequent, while those after 1990 were Asterionella formosa, Asterionella gracillima, Aulacoseira granulate, Aulacoseira granulata var. angustissima, Chlorella vulgare, Fragilaria crotonensis and Synedra ulna. Phytoplankton blooms were frequent from winter to the late spring and rare in summer due to heavy rain and discharge. Seasonal variations of the dominant species were fairly obvious; Asterionella gracillima and Aulacoseira granulata in spring, Aulacoseira granulate and Aulacoseira granulate var. angustissima in summer and autumn, Asterionella gracillima and Stephan discus hantzschii in winter. Recently blue-green algae, Microcystis, Aphanocapsa, Dactylococcopsis have been more abundant than those of the previous reports. Based on the current situations, Stephan discus hantzschii f. tennis, Asterionella gracillima, Aulacoseira granulate and blue-green algae will be more abundant and blooms of those species will be more frequent.

Evaluation of Methods for Cyanobacterial Cell Lysis and Toxin (Microcystin-LR) Extraction Using Chromatographic and Mass Spectrometric Analyses

  • Kim, In S.;Nguyen, Giang-Huong;Kim, Sung-Youn;Lee, Jin-Wook;Yu, Hye-Weon
    • Environmental Engineering Research
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    • v.14 no.4
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    • pp.250-254
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    • 2009
  • Contamination of microcystins, a family of heptapeptide hepatotoxins, in eutrophic water bodies is a worldwide problem. Due to their poisoning effects on animals and humans, there is a requirement to characterize and quantify all microcystins present in a sample. As microcystins are, for most part, intracellular toxins produced by some genera of cyanobacteria, lysing cyanobacterial cells to release all microcystins is considered an important step. To date, although many cell lysis methods have been used, little work has been conducted comparing the results of those different methods. In this study, various methods for cell lysis and toxin extraction from the cell lysates were investigated, including sonication, bead beating, freeze/thaw, lyophilization and lysing with TritonX-100 surfactant. It was found that lyophilization, followed by extraction with 75% methanol, was the most effective for extracting toxins from Microcystis aeruginosa cells. Another important step prior to the analysis is removing impurities and concentrating the target analyte. For these purposes, a C18 Sep-Pak solid phase extraction cartridge was used, with the percentage of the eluent methanol also evaluated. As a result, methanol percentages higher than 75% appeared to be the best eluting solvent in terms of microcystin-leucine-arginine (MC-LR) recovery efficiency for the further chromatographic and mass spectrometric analyses.

Studies on Seasonal Variation of Algae Distribution in the Chuam Reservoir (주암호 조류 분포의 계절별 변화에 관한 연구)

  • Jeong, Jin;Cho, Young-Gwan;Kim, Jong-Sun;Lee, Jin-Chong
    • Journal of environmental and Sanitary engineering
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    • v.13 no.2
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    • pp.1-13
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    • 1998
  • Seasonal variation of algae distribution were studied in the Chuam reservoir from August 1996 to July 1997. As a result, 127 taxa were observed, representing 6 classes, 14 orders, 5 suborders, 29 families, 2 subfamilies, 54 genus, 118 species, 7 variaties and 2 formula. The majors of them are Chlorophyceae (59 taxa), Bacillariophyceae(39 taxa) and Cyanophyceae(20 taxa). The number of species was that 35 and 31 taxa were occurred in August 1996 and April 1997, 11 and 17 taxa in July 1997 and October 1996 respectively at Dam station, 53 taxa were occurred in September, 18 taxa in November at Munduck station. The biomass composition of occurrence species were as fallowes; Cyanophyceae are 80%, Bacillariophyceae 14% and Chlorophyceae 5% at Dam station and Cyanophyceae are 90%, Bacillariophyceae 1.3% and Chlorophyceae 0.4% at Munduck at Munduk station. At Munduk station, water bloom occurred by Cyanophyceae(99.9%, 3.7 $\times$ 10$^{7}$ cells/L) in November 1996 and the major causing algae was Microcrystis aeruginosa. Microcystis aeruginosa was dominant species (dominant index : 0.72 - 0.99) during summer and autumn, Fragilaria crotonensis and Asterionella formasa (DI : 0.33 - 0.74) during winter and spring. The water quality factors of the Chuam reservoir were that the values of water temperature ranged of 3.6 - 31.4$\circ$C, pH 6.7 - 9.0, conductivity 69.6-118.2 $\mu $s/cm, and turbidity 1.0-22.5 NTU, and the proper temperature of water for algae growth was 15 and 16.7$\circ $C in April and November. Also the concentration of dissolved oxygen(DO) ranged of 6.8-15.5mg/L, total nitrogen(T-N) 0.54-1.78 mg/L, total phosphrous (T-P) 0.003-0.034 mg/L, and chlorophyll-a 0.9-23.2mg/m$^{3}$. The concentration of Chlorophyll-a was in inverse proportion T-N/T-P ratio.

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