• 한국생물공학회:학술대회논문집
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• 2004.07a
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• pp.47-84
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• 2004

Principal Component Analysis나 Partial Least Squares와 같은 다변량 통계 기법은 변수간의 correlation structure로부터 공정의 variance를 설명할 수 있는 latent variable를 얻고 이를 이용하여 공정을 효과적으로 modeling할 수 있는 방법으로 최근 들어 많은 관심을 얻고 있다. 하지만 PLS는 공정이 stationary state에 있다고 가정하기 때문에, 생물학적 공정의 non-stationary and time-varying behavior를 설명하기에 부적절하다. 본 논문에서는 PLS 알고리즘의 혐기성 폐수처리 공정에의 적용에 있어, 이와 같은 문제를 해결하기 위해서 adaptive PLS 알고리즘을 사용함으로써 변화하는 공정의 특성에 대응하여 모델을 update하는 방법을 이용하였다. 하지만 실시간 데이터로부터 adaptive PLS 방법을 적용하는 데에는 많은 어려움이 존재하며, 특히 outlier나 abnormal disturbance에 모델이 부적절하게 adaptation하는 문제가 발생할 수 있다. 따라서 이의 해결을 위해 adaptive PLS를 적용하는데 있어 robustness를 향상시키기 위해 monitoring index를 이용하여 abnormal data에 weight를 주고 안정적인 모델의 update가 가능하게 하는 방법을 제안하였으며, 이를 적용하여 성공적으로 혐기성 폐수처리 공정의 Output을 예측하고 효과적으로 공정을 모니터링할 수 있었다. 만들어진 PLS 모델은 산업폐수를 처리하기 위한 industrial plan에서 측정된 실제 데이터에 적용하여 그 효용성을 입증하였으며, 그 결과는 mechanistic model을 적용하기 힘든 실공정에 비교적 쉽게 implementation할 수 있는 장점이 있다.

• BMB Reports
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• v.56 no.1
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• pp.15-23
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• 2023

After birth, animals are colonized by a diverse community of microorganisms. The digestive tract is known to contain the largest number of microbiome in the body. With emergence of the gut-brain axis, the importance of gut microbiome and its metabolites in host health has been extensively studied in recent years. The establishment of organoid culture systems has contributed to studying intestinal pathophysiology by replacing current limited models. Owing to their architectural and functional complexity similar to a real organ, co-culture of intestinal organoids with gut microbiome can provide mechanistic insights into the detrimental role of pathobiont and the homeostatic function of commensal symbiont. Here organoid-based bacterial co-culture techniques for modeling host-microbe interactions are reviewed. This review also summarizes representative studies that explore impact of enteric microorganisms on intestinal organoids to provide a better understanding of host-microbe interaction in the context of homeostasis and disease.

• Proceedings of the Korea Institute of Fire Science and Engineering Conference
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• 2008.11a
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• pp.422-427
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• 2008

The major cause of Concrete Spalling at high temperatures can be divided into the Vapor Pressure Rising, caused by the increase in free water temperature within the concrete, and Pore Pressure Rising induced by the vapor moving into dense pores within the concrete. Although the occurrence of spalling within concrete caused by these pressure increases can be assessed experimentally, a close examination into Mechanistic influence against various spalling factors shall be carried out first by using Mathematical Modeling and Theoretical Equations. The Spalling Prospect Process by theoretical mechanism is expedited in order of the following; selection of heating condition (fire strength and flame heating direction), a selection of constituent elements, an analysis of heat transmission, an analysis of moisture movement, distribution of water content, an analysis of pore/vapor pressure, and assessment of spalling occurrence.

• Journal of the Korean Society for Precision Engineering
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• v.17 no.12
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• pp.163-168
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• 2000

Once the chip has developed a mixed mode of side-curl and up-curl, it would generally curl to strike the tool flank. The development of the bending stresses and sheat in the chip would ultimately lead to chip failure. This paper approach this problem from a mechanics-based approach, by treating the chip as a 3-D elastic curved beam, and applying appropriate constraints and forces. The expressions for bending, shear and direct stresses are developed through an energy-based criterion. The location of the maximum stresses is also identified and explained for simulated test conditions.

• Nuclear Engineering and Technology
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• v.31 no.2
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• pp.182-191
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• 1999

The sorption of UO$_{2}$$^{2+}$ onto goethite and kaolinite under various experimental conditions was successfully interpreted using surface complexation modeling (SCM). The SCM approach used in this work is the triple-layer model (TLM) in which weakly bonded ions are modeled as outer-sphere (ion-pair) complexes and strongly bonded ions as inner-sphere (surface coordination) complexes. The change of ionic strength did not affect the U(VI) sorption onto goethite, thus the formation of inner-sphere surface complexes, (FeO)$_2$UO$_2$ and (FeO)$_2$(UO$_2$)$_3$OH$_{5}$ was assumed to simulate the effects of ionic strength and goethite concentration. On the other hand, the U(VI) sorption onto kaolinite showed ionic strength dependence, thus the formation of AlO-UO$_{2}$$^{2+}$(outer-sphere complex) and SiO(UO$_2$)$_3$OH$_{5}$ (inner-sphere complex) was assumed to simulate the experimental data. In the presence of carbonates, the sorption of U(VI) onto kaolinite decreased in the weakly alkaline pH range. This was well simulated assuming the formation of a outer-sphere surface complex, A1OH$^{2+}$- (UO$_2$)$_2$CO$_3$OH$_3$. Since SCM approach uses thermodynamic data such as surface complexation constants, it is more predictive than empirical modeling approach in which conditional values such as partition coefficient are used. used.

• Transactions of the Korean Society of Pressure Vessels and Piping
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• v.12 no.2
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• pp.40-49
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• 2016

Flow accelerated corrosion (FAC) of the carbon steel piping has been a significant problem in nuclear power plants. FAC occurs under certain hydrodynamic, environmental, and material conditions, and extensive research into the factors of FAC has been conducted. The basic process of FAC is now relatively well understood; however, a full mechanistic model has not yet been established. Recently, the Korea Atomic Energy Research Institute (KAERI) has built a large experiment loop system for FAC. To produce significant experimental results using this system, the factors affecting on FAC should be analyzed quantitatively, and a model needs to be developed. In this work, a statistical modeling methodology to develop an empirical model is described in detail, and a preliminary model is suggested. Firstly, FAC data were collected from the research literature in Japan and the results of domestic experiments. The flow rate, water temperature, pH at room temperature, and the Cr content are selected as major factors, and nonlinear regression is used to find the best fit of the available data. An iterative procedure between suggesting and evaluating a model is used until an optimum model is obtained. The developed model gives the FAC rate comparable to the measured FAC rate. The developed model is going to be refined using additional laboratory data in the future.

• BMB Reports
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• v.41 no.3
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• pp.184-193
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• 2008

Living organisms are comprised of various systems at different levels, i.e., organs, tissues, and cells. Each system carries out its diverse functions in response to environmental and genetic perturbations, by utilizing biological networks, in which nodal components, such as, DNA, mRNAs, proteins, and metabolites, closely interact with each other. Systems biology investigates such systems by producing comprehensive global data that represent different levels of biological information, i.e., at the DNA, mRNA, protein, or metabolite levels, and by integrating this data into network models that generate coherent hypotheses for given biological situations. This review presents a systems biology framework, called the 'Integrative Proteomics Data Analysis Pipeline' (IPDAP), which generates mechanistic hypotheses from network models reconstructed by integrating diverse types of proteomic data generated by mass spectrometry-based proteomic analyses. The devised framework includes a serial set of computational and network analysis tools. Here, we demonstrate its functionalities by applying these tools to several conceptual examples.

• Proceedings of the Korean Nuclear Society Conference
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• 1997.10a
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• pp.599-604
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• 1997

One of important inconsistencies in the six-equation model predictions has been found to be the force experienced by a single bubble placed in a convergent stream of liquid. Various sets of governing equations yield different amount of forces to hold the bubble stationary in a convergent nozzle. By using the first order potential flow theory, it is found that the six-equation model can not be used to estimate the force experienced by a deformed bubble. The theoretical value of the particle stress of a bubble in a convergent nozzle flow has been found to be a function of the Weber number when bubble distortion is allowed. This force has been calculated by using different sets of governing equations and compared with the theoretical value. It is suggested in this study that the bubble size distribution function can be used to remove the presented inconsistency by relating the interfacial variables with different moments of the bubble size distribution function. This study also shows that the inconsistencies in the thermal-hydraulic governing equation can be removed by mechanistic modeling of the phasic interface.

• Proceedings of the Korean Nuclear Society Conference
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• 1999.10a
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• pp.247-247
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• 1999

This paper describes a new mechanistic thermal conductivity model considering the heterogeneous microstructure of MOX fuel. Even though the thermal conductivities of MOX have been investigated numerously by experimental measurements and theoretical analyses, they show the large scattering making the performance analysis of MOX fuel difficult. Therefore, a thermal conductivity model that depends on the heterogeneous microstructure of MOX fuel has been developed by using a general two-phase thermal conductivity model. In order to apply this model for developing the thermal conductivity for heterogeneous MOX fuel, the fuel is assumed to consist of Purich particles and U02 matrix including Pu02 in solid solution. Since little relevant data on Purich particles is available, FIGARO and SiemensKWU results are only used to characterize the microstructure of unirradiated and irradiated fuel. Philliponneaus and HALDEN models are selected for the local thermal conductivities for Purich particles and matrix, respectively. Then by combining the two models, overall thermal conductivity of MOX fuel is obtained. The new proposed model estimates the MOX thermal conductivity about 10% less than the value of U02 fuel, which is in the range of MOX thermal conductivity from HALDEN. The developed thermal conductivity model has been incorporated into KAERIs fuel performance code, COSMOS, and then verified using the measured data in the FIGARO program. Comparison of predicted and measured temperatures shows the reasonable agreement within acceptable error bounds together with satisfactory results for the fission gas release and gap pressure.essure.

• Journal of Korean Elementary Science Education
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• v.30 no.3
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• pp.353-366
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• 2011

An alternative vision for science inquiry that appears to be important and challenging is model-based inquiry in which students generate, evaluate and revise their explanatory model. Pre-service teachers should be given opportunities to develop and use their mechanistic explanatory models in order to participate in the practice of science and to have a sound understanding of science. With this view, this study described a case of pre-service elementary teachers' scientific modeling in magnetism. The aims of this study were to explore difficulties preservice elementary teachers encountered while they engaged in a model-based inquiry, and to examine how their understandings of the nature of scientific models changed after the model-based inquiry. The data analysis revealed that the pre-service teachers had difficulties in drawing and writing their own thinking because they had little experience of expressing their own science ideas. When asked to predict what would happen, they could not understand what it meant to make a prediction "based on their model". They did not know how to use or consider their model in making a prediction. At the end of the model-based inquiry they reached a final consensus of a best model. However, they were very anxious about whether the model was the "correct" answer. With respect to the nature of scientific models, almost all of the pre-service teachers initially viewed models only as a communication tool among scientists or students and teachers to help understand others' ideas. After the model-based inquiry, however, many of them understood that they could create, test, and revise their "own" models "by themselves". They also realized the key aspects of scientific models that a model can be changed as evidence is accumulated and a model is a knowledge production tool as well as a communication tool. The results indicated that pre-service elementary teachers' understandings of the nature of scientific models and their previous school science experiences could affect their performance on a model-based inquiry, and their experience of scientific modeling could help them enhance their understandings of the nature of scientific models.