• 제목/요약/키워드: Klebsiella species

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Prevalence and antimicrobial resistance of Klebsiella species isolated from clinically ill companion animals

  • Lee, Dan;Oh, Jae Young;Sum, Samuth;Park, Hee-Myung
    • Journal of Veterinary Science
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    • 제22권2호
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    • pp.17.1-17.13
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    • 2021
  • Background: Klebsiella spp. is an important conditional pathogen in humans and animals. However, due to the indiscriminate use of antibiotics, the incidence of antimicrobial resistance has increased. Objectives: The purpose of this study was to investigate antimicrobial resistance in strains of Klebsiella strains and the phylogenetic relatedness of extended-spectrum cephalosporin (ESC)-resistance among Klebsiella strains isolated from clinically ill companion animals. Methods: A total of 336 clinical specimens were collected from animal hospitals. Identification of Klebsiella species, determination of minimum inhibitory concentrations, detection of ESC resistance genes, polymerase chain reaction-based replicon typing of plasmids by conjugation, and multilocus sequence typing were performed. Results: Forty-three Klebsiella strains were isolated and, subsequently, 28 were identified as K. pneumoniae, 11 as K. oxytoca, and 4 as K. aerogenes. Eleven strains were isolated from feces, followed by 10 from ear, 7 from the nasal cavity, 6 from urine, 5 from genitals, and 4 from skin. Klebsiella isolates showed more than 40% resistance to penicillin, cephalosporin, fluoroquinolone, and aminoglycoside. ESCresistance genes, CTX-M groups (CTX-M-3, CTX-M-15, and CTX-M-65), and AmpC (CMY-2 and DHA-1) were most common in the K. pneumoniae strains. Some K. pneumoniae carrying CTX-M or AmpC were transferred via IncFII plasmids. Two sequence types, ST709 and ST307, from K. pneumoniae were most common. Conclusions: In conclusion, this is the first report on the prevalence, ESCresistance genotypes, and sequence types of Klebsiella strains isolated from clinically ill companion animals. The combination of infectious diseases and antimicrobial resistance by Klebsiella in companion animals suggest that, in clinical veterinary, antibiotic selection should be made carefully and in conjunction with the disease diagnosis.

Patterns of Antimicrobial Resistance and Genotyping of Extended Spectrum $\beta$-Lactamase (ESBL) Producing Clinical Isolates in Korea

  • ;김종배
    • 대한의생명과학회지
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    • 제13권4호
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    • pp.293-304
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    • 2007
  • The emergence of extended spectrum $\beta$-lactamase (ESBL) producing bacteria is worldwide concern. Until recently, the most frequently identified strains in the Republic of Korea were E. coli and Klebsiella spp. The incidence of resistance to extended spectrum $\beta$-lactam antibiotics is increasing in Wonju city, Korea. Total 57 strains of ESBL producing E. coli and Klebsiella species were isolated from Wonju Christian Hospital during a 9 month-period from April to December, 2003. To determine the prevalence and genotypes of the ESBL producing clinical isolates, antibiotic susceptibility and ESBL activity test by VITEK system and double disk synergy (DDS) test, and PCR based genotyping were performed. Fourteen (82%) isolates of 17 ESBL producing E. coli were found to have $bla_{TEM}$ gene and 5 (29%) isolates were found to have $bla_{CTX-M}$ gene by polymerase chain reaction (PCR). Thirty (75%) isolates of 40 ESBL producing Klebsiella species with $bla_{TEM}$ gene, 38 (95%) isolates with $bla_{SHV}$ gene, and 7 (20%) isolates with $bla_{CTX-M}$ type gene were also identified. Enterobacterial repetitive intergenic consensus (ERIC) PCR and similarity index by dendrogram for genetical similarity to band pattern of each clinical isolates were examined. ESBL producing E. coli were grouped into 6 clusters up to 84% of similarity index and Klebsiella species were grouped into 12 clusters up to 76% of similarity index. In conclusion, ESBL producing clinical isolates were characterized with the results from antimicrobial resistance pattern and genetical similarity using ERiC PCR.

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간척지토양(干拓地土壤)의 수도근권(水稻根圈)에서 협생질소고정(協生窒素固定)에 관(關)한 연구(硏究) -제(第) II 보(報). 혈청면역학적(血淸免疫學的) 방법(方法)에 의한 협생질소고정세균(協生窒素固定細菌)의 분리(分離) (Associated Nitrogen Fixation in the Rhizosphere of Rice in Saline and Reclaimed Saline Paddy Soil -II. Identification of associative heterotrophic nitrogen fixing bacteria in histosphere of grasses and rice)

  • 이상규;서장선;고재영
    • 한국토양비료학회지
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    • 제20권2호
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    • pp.193-197
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    • 1987
  • 우리나라 서남해(西南海) 간사지(干瀉地) 및 간척답토양(干拓沓土壤)에서 자생(自生)하는 벼과(科)(5종(種)), 석죽과(科)(2종(種)), 질경이과(科)(2종(種))식물(植物) 및 수도(水稻)(2품종(品種))의 뿌리에서 협생질소고정균(協生窒素固定菌)의 분리동정(分離同定) 결과(結果)는 다음과 같다. 1. 수답(水沓) 및 자생식물(自生植物)뿌리에서 24종(種)의 질소고정능(窒素固定能)이 높은 협생질소고정균(協生窒素固定菌)을 분리(分離)하였으며 분리(分離)된 세균(細菌)은 8종(種)의 Azospirillum 속(屬), 11종(種)의 Pseudomonas 속(屬), 2종(種)의 Agrobacterium 속(屬) 그리고 2종(種)의 Klebsiella 속(屬)의 세균(細菌)으로서 대체(大體)로 Azospirillum 속(屬)과 Pseudomonas 속(屬)의 세균(細菌)이 많았다. 2. 각종식물별(各種植物別) 협생질소고정균(協生窒素固定菌)의 종류(種類)는 수도(水稻)와 큰 개미자리 뿌리에서 Azospirillum 속(屬), Pseudomonas 속(屬), Agrobacterium 속(屬) 그리고 Klebsiella 속(屬)의 세균(細菌)이 갯쇠보리, 창질경이, 털질경이, 각시미꾸리광이, 및 물억새 뿌리에서 Pseudomonas 속(屬), 그리고 갯잔디에서 Azospirillum 속(屬)의 세균(細菌)이 각각(各各) 분리(分離)되었는데 그중 수도(水稻)와 큰개미자리가 타식물(他植物)뿌리보다 협생질소고정균(協生窒素固定菌)의 종류(種類)가 많았다. 3. 간척지토양수도(干拓地土壤水稻) 및 식물(植物)뿌리에서 분리(分離)된 세균(細菌)의 혈청면역학적동정결과(血淸免疫學的同定結果) 이들 협생질소고정균(協生窒素固定菌은 Azospirillum lipoferum, Pseudomonas sp, Agrobacterium radiobader, 및 Klebsiella planticola 였다.

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병원성장내세균에서 phoP-phoQ operon의 지배를 받는 phoA 유전자의 cloning 및 염기서열결정 (Cloning and Sequencing of the phoA Gene which is Regulated by the phoP-phoQ Operon in Pathogenic Enteric Bacteria)

  • 김성광;이태윤
    • Journal of Yeungnam Medical Science
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    • 제12권2호
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    • pp.237-245
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    • 1995
  • Klebsiella pneumoniae 의 phoA 유전자를 함유하는 DNA를 plasmid pACYC184에 클로닝 하였다. 클로닝된 DNA의 크기는 4.0 kb이었으며 제한효소지도를 작성한 결과 3개의 PstI 절단부위와 4개의 PvuII 절단부위가 발견되었다. Klebsiella pneumoniae 의 phoA 유전자의 염기서열은 Escherichia coli와 매우 유사하여 80%의 유사성을 보였으며 이는 이 두 균종이 서로 유전적으로 매우 가까운 관계에 있음을 시사하였다.

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식물역병균 Phytophthora spp.에 특이 길항균인 YNB54 균주의 분류 (Taxonomy of a Soil Bacteria YNB54 Strain Which Shows Specific Antagonistic Activities against Plant Pathogenic Phytophthora spp.)

  • 김삼선;권순우;이선영;김수진;구본성;원항연;김병용;여윤수;임융호;윤상홍
    • 한국미생물·생명공학회지
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    • 제34권2호
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    • pp.101-108
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    • 2006
  • Phytophthora sp.의 균사성장을 특이적으로 저해하는 토양 미생물인 YNB54 균주의 정확한 분류적 위치를 밝히기 위해 Biolog GN2, API 20E와 같은 상업적 생화학 kit, 16S rDNA, DAN-DNA hybridization, GC함량, MIDI 등의 분석을 수행하였다. 다양한 생화학적 kit를 사용한 동정 결과는 이 균주가 다른 어떤 종보다 Enterobacter cloacae와 E. cancerogenus에 보다 더 가까움을 보여주었다. 또한 DAN-DNA hybridization, GC함량, MIDI 분석의 결과들 역시 다른 속 (Citerobacter, Klebsiella, Leclercia)보다 Enterobacter 속에 더 유사함을 암시해 주었다. 그러나 16S rDNA분석에서 이 균주는 Citrobacter freundii(99.4%)와 동일 그룹으로 구분되었지만 Enterobacter, Leclecia, Klebsiella 속 등과도 98%이상의 상동성을 보여주는 polyphyletic 특성을 보였다. 결론적으로 YNB54의 분류 동정을 위한 우리의 조사들은 이 균주가 유전적으로 다양하고 지금까지 아는 것보다 분류학적으로 더 복잡함을 암시해줌에도 불구하고 Enterobacter속임이 가장 유력하다는 것을 보여 주었다.

Species Transferability of Klebsiella pneumoniae Carbapenemase-2 Isolated from a High-Risk Clone of Escherichia coli ST410

  • Lee, Miyoung;Choi, Tae-Jin
    • Journal of Microbiology and Biotechnology
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    • 제30권7호
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    • pp.974-981
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    • 2020
  • Sequence type 410 (ST410) of Escherichia coli is an extraintestinal pathogen associated with multi drug resistance. In this study, we aimed to investigate the horizontal propagation pathway of a high-risk clone of E. coli ST410 that produces Klebsiella pneumoniae carbapenemase (KPC). blaKPC-encoding E. coli and K. pneumoniae isolates were evaluated, and complete sequencing and comparative analysis of blaKPC-encoding plasmids from E. coli and K. pneumoniae, antimicrobial susceptibility tests, polymerase chain reaction, multilocus sequence typing, and conjugal transfer of plasmids were performed. Whole-genome sequencing was performed for plasmids mediating KPC-2 production in E. coli and K. pneumoniae clinical isolates. Strains E. coli CPEc171209 and K. pneumoniae CPKp171210 were identified as ST410 and ST307, respectively. CPEc171209 harbored five plasmids belonging to serotype O8:H21, which is in the antimicrobial-resistant clade C4/H24. The CPKp171210 isolate harbored three plasmids. Both strains harbored various additional antimicrobial resistance genes. The IncX3 plasmid pECBHS_9_5 harbored blaKPC-2 within a truncated Tn4401a transposon, which also contains blaSHV-182 with duplicated conjugative elements. This plasmid displayed 100% identity with the IncX3 plasmid pKPBHS_10_3 from the K. pneumoniae CPKp171210 ST307 strain. The genes responsible for the conjugal transfer of the IncX3 plasmid included tra/trb clusters and pil genes coding the type IV pilus. ST410 can be transmitted between patients, posing an elevated risk in clinical settings. The emergence of a KPC-producing E. coli strain (ST410) is concerning because the blaKPC-2-bearing plasmids may carry treatment resistance across species barriers. Transgenic translocation occurs among carbapenem-resistant bacteria, which may spread rapidly via horizontal migration.

광안리 오수처리장에 분리된 Extended-Spectrum $\beta$-Lactamase (ESBL) Klebsiella와 Enterobacter의 유형 (Characterization of Extended-Spectrum $\beta$-Lactamases (ESBL) Producing Klebsiella and Enterobacter Isolated from Sewerage Plant Drain Water at Kwang-An in Pusan)

  • 이훈구
    • 미생물학회지
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    • 제37권4호
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    • pp.277-283
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    • 2001
  • 본 논문은 임상검체 이외의 자연계내에서 extended-spectrum $\beta$-lactamase (ESBL) 생성균주의 분리 여부를 확인하고, 분리되었을 경우 이들의 유형을 조사하기 위함이었다. 하수종말처리장, 가물치양식장, 부경대학교 담수어양식장, 공중목욕탕으로부터 분리된 균주를 double disk synergy 검사, 교환접합시험, 등전점 조사 등을 실시하여 하수종말처리장 방류수로붙 extended-spectrum $\beta$-lactamase (ESBL) 생성균주가 26 균주 분리되었다. 균종은 Entero-bacter cloacae와 E. sakazakii, Klebsiella pneumoniae subsp. pneumoniae 및 K. pneumoniae subsp. ozaenae 였다. 이들은 모두 PCR결과 TEM+SHV 복합형이었고 등전점 결과 Klebsiella속의 균들은 pI 5.9, 5.9+5.4 E. cloacae는 $pI{\ge}8.5$, 8.0+5.4, E. sakazakii는 8.0+5.4, 8.0+5.9+5.4였다. 교차접합시험(transconjugation) 결과 피전달 균주인 E. coli RG176 nal$_{r}$에게 K. pneumoniae subsp. pneumoniae (1 균주) K. pneumoniae subsp. ozaenea (5 균주)및 E. cloacae (1 균주)의 $\beta$-lactamase 생성유전자가 전달되었다. 이 결과는 국내에서 임상검체 이외의 자연계에서 분리된 ESBL생성 장내세균의 첫 번째 보고이다.

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경부심부감염의 임상적 고찰 (A Clinical Study of Deep Neck Infection)

  • 이시형;김상윤;남순열;김준모;유승주
    • 대한기관식도과학회지
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    • 제7권1호
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    • pp.34-39
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    • 2001
  • Background and Objectives: Deep neck infections, which affect soft tissues and fascial compartments of the head and neck and their contents, have decreased after the develop ment of chemotherapeutic agents and antibiotics. However they may still result in significant morbidity and mortality despite the use of chemotherapeutic agents and antibiotics. Materials and Methods : A retrospective study was performed on 66 deep neck infections in patients admitted for diagnosis and treatment at Asan medical center from June 1994 to December 2000. Results : Age of the patients varied from 1 to 86-year-old and sex ratio of male to female was 1.2:1. Most frequently involved site was submandibular space (21.2%). Most common cause of infection was dental disease (28.8%). The isolated pathogenic organisms were Streptococcus species in 19 cases, Staphylococcus species in 7 cases, Klebsiella in 5 cases, mixed infection of Staphylococcus and Klebsiella in 3 cases and a case of Corynebacterium. 51 cases were treated surgically, 15 cases were medically. Mean duration of admission was 9.6 days in cases of single space infection, 17.5 days in multiple spaces, 8.1 days when the infection resulted in cellulitis, 13.4 days in abscess, 7.9 days when the infection treated medically and 13.4 days when treated surgically. Conclusion Early diagnosis and treatment is important to manage deep neck infection and the duration of admission was increased when the infection involved multiple spaces.

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Detection of Waterborne Pathogens by PCR-reverse Blot Hybridization

  • Choi, Yeon-Im;Lee, Gyu-Sang;Bang, Hye-Eun;Kim, Jong-Bae;Lee, Hye-Young
    • 대한의생명과학회지
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    • 제16권1호
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    • pp.10-18
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    • 2010
  • The present study was set to develop comprehensive system for assessing the safety of drinking water using PCR-reverse blot hybridization assay (REBA). The REBA developed in this study can detect waterborne pathogens such as Shigella spp., Salmonella spp., Citrobacter spp., Enterobacter spp., Klebsiella spp., Yersinia spp., Mycobacterium spp., Listeria spp. at the genus level, and Escherichia coli, Citrobacter freundii, Klebsiella pneumoniae, Pseudomonas aeruginosa, Yersinia enterocolitica, Y. pseudotuberculosis, Mycobacterium avium complex, M. marinum, Enterococcus faecalis, and Staphylococcus aureus at the species level, and E. coli O157:H7 at the strain level.