• Title/Summary/Keyword: K-L transformation

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Genetic Polymorphism of ADPRT Gene 3'UTR Region and Sasang Constitution (사상체질집단의 ADPRT gene 3'UTR region의 단일염기다형성 연구)

  • Lee, Sung-Jin;Song, Il-Byung;Lee, Su-Kyung
    • Journal of Sasang Constitutional Medicine
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    • v.14 no.2
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    • pp.90-97
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    • 2002
  • Sasang Constitutional Medicine is based on the diversity of human being and medically developed the variation of response to diseases and medicines. The diversity is categorized as four groups Taeyangin, Taeumin, Soyangin, Soeumin according to morphology, physiology, pathology, and pharmacology. The phenotypes of Sasang constitutions represent that constitutions may be possessed of the different genetic backgrounds. To clarify the genetic difference among the Sasang constitutions, we performed a genetic analysis with the 3'-UTR polymorphism of ADPRT (rs=8679) as a pooled DNA sequencing method. ADPRT modulates various nuclear proteins by poly(ADP-ribosy)lation and is involved in the regulation of various cellular processes such as differentiation, proliferation, and tumor transformation. This gene is also involved in the recovery of cell from DNA damage and the brain infarction. The allele frequencies of [T/C] polymorphism of ADPRT of Soeumin and Soyangin groups were (T: 0.94/C: 0.06) and that of Taeumin and Taeyangin groups were (T: l.00/C: 0.00). The allele frequency was not showed the difference between constitution groups. This result represented that the [T/C] polymorphism of ADPRT 3' UTR region was not suitable to classify the constitutions. However, this study is the first trial of Sasang classification according to genetic polymorphism and further analysis will be necessarily to classify the genetic difference of Sasang constitution.

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Cloning and Characterization of Replication Origins from Misgurnus mizolepis (미꾸라지로부터의 복제원점 클로닝 및 그 특성에 관한 연구)

  • Lim Hak-Seob;Kim Moo-Sang;Lee Hyung-Ho
    • Journal of Aquaculture
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    • v.8 no.3
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    • pp.209-220
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    • 1995
  • The nuclear matrix was isolated from Misgumus mizolepis liver nuclei by low salt extraction and restriction enzyme treatment. The structure was digested with proteinase K. After centrifugation, matrix attachment regions (MARs) were obtained by RNase treatment and phenol-chloroform extraction. The result leads to the appearance of smeared bands in the range of about 0.3-15 kb. pURY19 vector was constructed by inserting 2.13 kb Eco47 III fragment of the yeast uracil 3 gene into the unique Ssp I site of pUC19 plasmid vector as a selection marker. This vector is unable to be maintained in Sacrharomyces cerevisiae by itself since it cannot replicate as an extrachromosomal element. Using this system, we attempted cloning the ARS (autonomously replicating sequence) from M. mizelepis to develop an efficient expression vector for the transgenic fish. pURY19N_{l-62}$ were constructed by inserting MARs in pURY19 plasmid vector and transformation of E. coli $DH5\alpha$. Replication origins (ARS) of M. mizolepis were isolated, which enabled the vector to replicate autonomously in S. cerevisiae. The cloned DNA fragments were sequenced by Sanger's dideoxy-chain termination method. All clones were AT-rich. $pURY19N_6$, one of the clones, expecially contained ARS consensus sequence, Topoisomerase II consensus, near A-box and T-box.

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2, 4, 5-Trichlorophenoxyacetic Acid 분해균의 유전적 특성에 관한 연구

  • Yoon, So-Yeong;Son, Hong-Joo;Lee, Geon;Lee, Sang-Joon;Lee, Jong-Kun
    • Korean Journal of Microbiology
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    • v.30 no.4
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    • pp.260-264
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    • 1992
  • Pseudotnorju.c sp. EL-071P degrading 2.4.5-trichlorophe~~oxyi~cetaicci d (2.3.5-T) was resistantto antibiotics: rifampicin. ampicillin. kanamycin and metal ions : Zn" and Cu".The plasmitl related to the degradation of 2.4.5-'r and rifa~npicin resistance was isolatecifrom the strain. Its size was about 40 Kb. As result of transforming the plasmid intoEsch~rirhiti coli MClOhl, it was confirmed that the plasmid ura.; related to 2.4.5-T degradation.The strain coulil grow in the various chlorinated aromatic analogs as the solc carbon source.In the case of chlorophcnols. the chlorinated mono-substituteti phenols were easily dcgradetlin the order ol' ortho-. ~ ~ a r um- ,c ~tu-position.T he 2.3.5-T mctaholism was inhibited by 4-chlorophenol of 2.4.5-7' analog. In non-chlorinateci aromatics. ~ C I I L O ~ I ~ Csa.l icylilte i~ndtoluene were uscd ax the carbon source by the strain and typestrain Acudonlotrtr.\ plrtirltrKCTC 1643 having clegrad;~bility of various aromatics. But naphtalene was usecl only bythe A~urlomonri.\ sp. EL-07 1 P.the A~urlomonri.\ sp. EL-07 1 P.

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The Transformation of Saponin Platycodi Radix by Aspergillus niger and Anti-oxidation Evaluation of the Transformed Metabolites (Aspergillus niger 효소에 의한 길경 사포닌(플라티코딘)의 전환 및 항산화 활성 비교)

  • Kang, Ju-Hui;Ji, Gnu-Uk;Wui, Hye-Jung;Hwang, In-Kyeung
    • Korean journal of food and cookery science
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    • v.24 no.6
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    • pp.729-734
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    • 2008
  • The principal objective of this study was to assess the possibility of transforming platycodin glycosides using various strains of probiotic bateria and edible fungi. Among the experimental microorganisms assess herein, Aspergillus niger KCTC 6909 evidenced the highest level of platycodin glycoside hydrolysis during fermentation. Particularly in cases in which the organism was incubated in the presence of rhamnose and platycodins. In order to produce the enzyme from Aspergillus niger effectively, various incubation conditions were assessd in order to determine the optimal conditions. The cytotoxicity on V79-4 (Chinese- hamster lung fibroblasts, normal cells) of platycodin was reduced significantly after conversion (concentration on $500{\mu}g/mL$, $1000{\mu}g/mL$); DPPH radical scavenging activity before conversion was 35.05%, and was 57.44% afterward. We noted significantly higher conversion activity inhibiting oxidative degradation. In conclusion, these results indicate that the proper combination of food microorganisms -and fermentation conditions can result in an increase in the glycoside hydrolysis of platycodin the resultant products of which reduce cytotoxicity- and increase anti-oxidant activity.

Effects of feeding different varieties of faba bean (Vicia faba L.) straws with concentrate supplement on feed intake, digestibility, body weight gain and carcass characteristics of Arsi-Bale sheep

  • Wegi, Teklu;Tolera, Adugna;Wamatu, Jane;Animut, Getachew;Rischkowsky, Barbara
    • Asian-Australasian Journal of Animal Sciences
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    • v.31 no.8
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    • pp.1221-1229
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    • 2018
  • Objective: A study was conducted to evaluate the varietal differences among faba bean straws and also to assess the potentials of faba bean straws supplemented with concentrate fed at the rate 70% straws and 30% concentrate mixture on feed intake, digestibility, body weight gain and carcass characteristics of the animals. Methods: Forty yearling Arsi-Bale sheep with initial body weight of $19.85{\pm}0.29kg$ (mean${\pm}$standard deviation) were grouped in a randomized complete block design into eight blocks of five animals each based on their initial body weight. Straws included in the study were from Mosisa (T1M), Walki (T2W), Degaga (T3D), Shallo (T4S), and local (T5L) varieties of faba bean and concentrate (2:1 ratio of wheat bran to "noug" seed cake). The experiment consisted of seven days of digestibility and 90 days of feeding trials followed by evaluation of carcass parameters at the end. Results: Local variety had lower (p<0.05) in grain and straw yield compared to improved varieties but higher in crude protein, metabolizable energy contents and in vitro organic matter digestibility. The apparent digestibility of dry matter and crude protein of sheep fed Walki and Mosisa straws were higher than (p<0.05) straws from Shallo varieties. Sheep fed Walki straw had greater (p<0.05) dry matter intake, average daily gain and feed conversion efficiency than sheep fed local and Shallo straws. Slaughter body weight and empty body weight were higher (p<0.05) for sheep fed Mosisa and Walki straws as compared to sheep fed Shallo straws. Apart from this, the other carcass components were not affected (p>0.05) by variety of the faba bean straws. Conclusion: There is significant varietal differences between faba bean straws both in quality and quantity. Similarly, significant variation was observed in feed intake, digestibility, body weight gain and feed conversion efficiency among sheep fed different straws of faba bean varieties with concentrate supplement. Based on these results, Walki and Mosisa varieties could be recommended as pulse crop rotation with cereals in the study area.

$^{14}CO_2$ Fixation and Assimilate Transformation in Barley Leaves (보리 엽의 $^{14}CO_2$ 고정과 동화산물의 전환)

  • Paek, Kee-Yoeup;Lee, Sung-Sik
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.33 no.1
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    • pp.64-69
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    • 1988
  • Young barley plants (Hordeum vulgare) were exposed to $^{14}$ Co$_2$ for 10 and 30 minutes. Leaves were harvested and extracted for aqueous soluble metabolites which were fractionated into amino acids, sugars, sugar phosphates and organic acids. It was found that both 10 and 30 minute incubation periods had similar quantities of label but differed in the quality and quantity. It was also found that the neutral fraction (sugars, phosphate esters and organic acids) had 4.5 times more label than the amino acid fraction at 10 minutes and only about 1.7 times at 30 minutes. Label increased moderately from 10 minutes in the sugar fraction where there was a large increase in the amino acid fraction, both qualitatively and quantitatively. Photosynthetic rate was found to be quite different when the 10 minute incubation and the 30 minute incubation were compared (0.125 vs 0.034 and 0.042 $\mu$mole co$_2$/mg chlorophy 11/min respectively).

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Cytotoxicity of Shikonin Metabolites with Biotransformation of Human Intestinal Bacteria

  • Min, Byung-Sun;Meselhy, Meselhy-R.;Hattori, Masao;Kim, Hwan-Mook;Kim, Young-Ho
    • Journal of Microbiology and Biotechnology
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    • v.10 no.4
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    • pp.514-517
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    • 2000
  • Abstracts Six shikonin metabolites were obtained from human intestinal bacteria, Bacteriodes fragilis subsp. thetaotus. following biotransformation. The transformation of shikonin (1) was performed anaerobically for 3 day at $37^{\circ}C$ in thc bacterial suspension of B. Fagilis which was cultured overnight in GAM broth. The incubation mixture \vas extracted with EtGAc Lo give a dark-brown residue. The residue was apphed to a silica gel column, which was eluted successively with hexane (Fr. A), $CHCl_3$ (Fr. B), and $CHCl_3$:MeOH (9:I) (Fr. C). Six metabolites. Fr.A (2 and 3), Fr. B (6 and 7), and Fr. C (4 and 5) were isolated by repeated silica gel column chromatography, preparatlVe TLC, followed by Sephadex LH-20. In vitro cytotoxicities were tested against human tumor cell lines; PC-3 (prostate), ACHN (renal), A549 (lung), SW620 (colon), KS62 (leukemia), and Du145 (prostate). The shikonin metabolites 2. 4, 5, and 6 showed weaker cytotoxicity than the parenL shikonin (1). whereas shikonin monomenc metabolite 3 ($ED_{50}{\;}O.44-{\;}1.22{\;}\mu\textrm{g}/ml$) and dimeric metabolite 7 ($ED_{50}{\;}O.48-{\;}2.35{\;}\mu\textrm{g}/ml$) exhibited stronger activities compared with adriamycin, which was used as the positive control.ontrol.

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Genetic Evaluation of First Lactation Traits in Sahiwal Cattle Using Restricted Maximum Likelihood Technique

  • Choudhary, V.;Kothekar, M.D.;Raheja, K.L.;Kasturiwale, N.N.;Khire, D.W.;Kumar, P.
    • Asian-Australasian Journal of Animal Sciences
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    • v.16 no.5
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    • pp.639-643
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    • 2003
  • The data on 283 Sahiwal cows, sired by 16 bulls, maintained at Cattle Breeding Farm of Nagpur Veterinary College and Dairy Farm of Agricultural College, Nagpur, were considered for the estimation of genetic parameters. Variance and covariance estimates of first lactation traits were obtained using restricted maximum likelihood technique (REML). When first lactation milk yield (FLMY), first lactation length (FLL) and average daily yield (ADY) traits were considered for REML analysis, the heritabilities were $0.184{\pm}0.146$, $0.132{\pm}0.131$ and $0.141{\pm}0.133$, respectively. While, genetic and phenotypic correlations between them were medium to high except phenotypic correlations between FLL and ADY (-0.025). REML procedure considering FLMY, age at first calving (AFC) and first service period (FSP) combination exhibits heritabilities as $0.274{\pm}0.173$, $0.506{\pm}0.233$ and $0.274{\pm}0.172$, respectively. Genetic correlations were $-0.120{\pm}0.376$, $0.225{\pm}0.423$ and $0.365{\pm}0.331$ between FLMY and AFC, FLMY and FSP, AFC and FSP, respectively. Phenotypic correlations were 0.057, 0.289 and 0.123, respectively. Considering all five traits REML combination heritabilities estimated were $0.238{\pm}0.162$, $0.160{\pm}0.139$, $0.136{\pm}0.132$, $0.409{\pm}0.209$ and $0.259{\pm}0.168$ for FLMY, FLL, ADY, AFC and FSP, respectively. The genetic correlations were positive except FLMY and AFC. The phenotypic correlations were also positive except FLL and ADY, ADY and FSP. Almost all estimates were associated with high standard error.

A New Approach for Hierarchical Optimization of Large Scale Non-linear Systems (대규모 비선형 시스템의 새로운 계층별 최적제어)

  • Park, Joon-Hoon;Kim, Jong-Boo
    • Journal of the Korean Institute of Telematics and Electronics T
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    • v.36T no.2
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    • pp.21-31
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    • 1999
  • This paper presents a new possibility of calculating optimal control for large scale which consist of non-linear dynamic sub-systems using two level hierarchical structures method. And the proposed method is based on the idea of block pulse transformation to simplify the algorithm and its calculation. This algorithm used an expansion around the equilibrium point of the system to fix the second and higher order terms. These terms are compensated for iteratively at the second level by providing a prediction for the states and controls which form of a part of the higher order terms. In this new approach the quadratic penalty terms are not used in the cost function. This allows convergence over a longer time horizon and also provides faster convergence. And the method is applied to the problem of optimization of the synchronous machine. Results show that the new approach is superior to conventional numerical method or other previous algorithm.

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The Effect of Cattle Slurry on N-Dynamics and $NO_3$ Leaching in Pasture Mixtures (목초 생산성과 액상분뇨 시용이 토양의 질소동태와 $NO_3$ 용탈에 미치는 영향)

  • 류종원
    • Journal of The Korean Society of Grassland and Forage Science
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    • v.17 no.1
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    • pp.43-50
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    • 1997
  • The aim of the study is to describe the fate and transformation of nitrogen in grassland ecosystems. Field experiments were conducted using sandyloam soil under variabling conditions: Zen, fertilization, reduced slurry application(l20kg N $ha^{-1}\;yr^{-1}$), usual sluny application (240 kg N $ha^{-1}\;yr^{-1}$).Soil water samples were gathered with 120cm ceramic cups with initial pressure of 0.5 bar. Samples were collected twice a month and analysed for NO, colormetrically. Percolation was calculated as the difference between precipitation and potential evapotranspiration, and leaching as the product of percolation and nitrate content of the water h m the ceramic cups. The N$H_4$-N content in soil had no significant effect on slurry application, but high slurry application on grassland resulted in high N$O_3$-N content in soil. The NO, concentration in soil water was remarkably variable during the year. The average N$O_3$, concentration during experiment became the lowest(8.5 mg/e ) without slurry application and highest with 240kOa cattle sluny(25.3 mg4 ). For each of the three different amounts of cattle sluny applied (0, 120, and 240kOa), the amount of N$O_3$-N leached per year were 12, 23 and 29kg/ha respectively. On grassland under the climatic conditions of Allgau showed enormous nitrate leaching, which has a p a t potential of polluting the ground water. The high pool of mineral N in the soil are the source for N$O_3$ leaching. The leaching of N$O_3$ cannot be avoided completely, but minimized by optimizing N fertilization rate.

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