• Title/Summary/Keyword: Influence Sequence

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Expression of Hepatitis B Viral Core Antigen Gene in Excherichia coli (대장균에서 한국형 B형 간염바이러스 내면항원 유전자의 발현)

  • 최수근;이원상;김성기;노현모
    • Korean Journal of Microbiology
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    • v.29 no.2
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    • pp.80-84
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    • 1991
  • We cloned and expressed hepatitis B viral core antigen (HBcAg) gene in E. coli using $P_{L}$ promoter system. For optimal expression of the gene, we undertook the studies on the effects of the distance between Shine-Dalgarno (SD) sequence and start codon, copy number of repressor gene, induction temperature, and the stability of the core antigen. The results demonstrated that the induction at 37.deg.C was more efficient than at 42.deg.C, and the 11 base pairs (bp) distance between SD sequence and start codon of HBcAg gene was more efficient than the 15 bp distance in E. coli. The copy number of cI857 repressor gene did not influence on the expression of HBcAg, and the expression level of HBcAg in mutant type (low protease activity) and wild type strains was almost the same. The produced core antigen appeared to be HBcAg not HBeAg judged by two different radioimmunoassat (RIA) kits. This result suggested that the antigen was stable in E. coli.i.

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Pushover analysis - result borders due to hinge formation orders

  • Kulkarni, Supriya R.;Narayan, K.S. Babu
    • Structural Monitoring and Maintenance
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    • v.5 no.2
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    • pp.173-187
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    • 2018
  • Performance evaluation of RC frame building by nonlinear static pushover analysis that accounts for elastic and post elastic behavior is becoming very popular as a valid decision making tool in seismic hazard resistant designs. Available literature suggests great amount of interest has shown by researchers in suggesting refinements to geometric and material modelling to bridge the gap between analytical predictions and observed performances. Notwithstanding the attempts gaps still exists. Sequence of plastic hinge formation which has great influence on pushover analysis results is an area less investigated. This paper attempts to highlight the importance of hinge sequence considerations to make analysis results more meaningful. Variation in analysis results due to different hinge sequences have been quantified, compared and bounds on analysis results have been presented.

Numerical Investigation of Surface Deformations in Resin Coated Quasi-Isotropic Laminates due to Thermal Variance (수지를 코팅한 준등방성 적층판에 대한 열변형 수치해석)

  • Kim, Kyung-Pyo
    • Korean Journal of Optics and Photonics
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    • v.25 no.4
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    • pp.207-215
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    • 2014
  • In this paper the radial stiffness associated with stacking sequence effects, and the dimensional stability issue associated with thermally induced surface deformation in quasi-isotropic laminates due to the effect of stacking sequence and additional resin layer technique, are numerically investigated. Finally, the influence of surface resin layer techniques for fiber print-through mitigation in a composite mirror is tested for evaluation of surface accuracy across varying thermal conditions.

The Influence of Polytypism and Impurities on the Phase Transformation of Kaolins: II. Halloysite (다중구조형 차이와 불순물이 카올린광물의 상전이에 미치는 영향: II. 할로이사이트)

  • 이수정
    • Economic and Environmental Geology
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    • v.32 no.4
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    • pp.411-418
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    • 1999
  • Mullitization of halloysite was examined with special attention to the influence of polytypism and impurities on the phase transformation. The phase transformation sequence in halloysite is identical with those in kaolinite and in dickite. Difference in the phase transformation above $1000^{\circ}C$ in kaolin minerals is attributed to the different crystal structures of metakaolins or the effect of impurities. Growth of mullite crytals in the discordered kaolinte including halloysite or illite occurs at about $100^{\circ}C$ lower temperature. Cristobalite is also hardly produced.

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Hybrid Lower-Dimensional Transformation for Similar Sequence Matching (유사 시퀀스 매칭을 위한 하이브리드 저차원 변환)

  • Moon, Yang-Sae;Kim, Jin-Ho
    • The KIPS Transactions:PartD
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    • v.15D no.1
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    • pp.31-40
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    • 2008
  • We generally use lower-dimensional transformations to convert high-dimensional sequences into low-dimensional points in similar sequence matching. These traditional transformations, however, show different characteristics in indexing performance by the type of time-series data. It means that the selection of lower-dimensional transformations makes a significant influence on the indexing performance in similar sequence matching. To solve this problem, in this paper we propose a hybrid approach that integrates multiple transformations and uses them in a single multidimensional index. We first propose a new notion of hybrid lower-dimensional transformation that exploits different lower-dimensional transformations for a sequence. We next define the hybrid distance to compute the distance between the transformed sequences. We then formally prove that the hybrid approach performs the similar sequence matching correctly. We also present the index building and the similar sequence matching algorithms that use the hybrid approach. Experimental results for various time-series data sets show that our hybrid approach outperforms the single transformation-based approach. These results indicate that the hybrid approach can be widely used for various time-series data with different characteristics.

Antifungal activities of peptides with the sequence 10-17 of magainin 2 at the N-termini against aspergillus fumigatus (Antifungal Activities of Peptides with the Sequence 10-17 of Magainin 2 at the N-termini against Aspergillus fumigatus)

  • Lee, Myung Kyu;Lee, Dong Gun;Shin Song Yub;Lee, Sung Gu;Kang Joo Hyun;Hahm, Kyung Soo
    • Journal of Microbiology
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    • v.34 no.3
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    • pp.274-278
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    • 1996
  • Two peptides, MA-inv AND MA-ME, with the sequence 10-17 of maganin 2 at their-N-termini were designed and synthesized. The peptides had higher antifungal activities against Aspergilus fumigatus without hemolytic activities. The minimal inhibition concentratory (MIC) values of both peptides against A. fumigatus were 5 .mu.g/ml, whereas those of the native peptides, magainin 2 and melittin, were 10.mu.g/ml. At 3 .mu.g/ml, MA-inv and MA-ME inhibited the mycelium growth of A. fumigatus by 94.6% and 97.3% respectively, whereas magainin 2 and melittin inhibited by 62.2% and 32.4, respectively. MA-inv showed up to 80% inhibition of (1, 3)-.betha.-D-glucan synthase activity of A. fumigatus. The peptides also showed up to 80% inhibition of (1, 3)-.betha.-D glucan synthase activity of A. fumigatus. The peptides also showed antifungal activities for other fungi of Aspergillus sp. However, the antibiotic activities of MA-ME against Escherichia coli, Bacillus subtilis and Fusarium oxysporum were more effective than those of MA-inv, suggesting that the C-terminal sequences of MA-inv and MA-ME may also influence their antibiotic activities. These results suggest that the N-terminal sequence of the designed peptides, KKFGKAFV, is important for their antifungal activities against A. fumigatus and their C- terminal sequences are related to the organism selectivity.

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Nucleotide sequence analysis of a second set of the polyketide synthase .betha.-ketoacyl synthase and chain length factor genes from the salinomycin-producing streptomyces albus

  • Hyun, Chang-Gu;Park, Kwan-Hyung;C.Richard Hutchinson;Suh, Joo-Won
    • Journal of Microbiology
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    • v.35 no.1
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    • pp.40-46
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    • 1997
  • The pWHM220 cosmid with a 24-kb insert cloned from Streptomyces albus ATCC 21838 induces the biosynthesis of a polysther antibiotic similar to salinomycin in Streptomyces invidans. We have analyzed this region by DNA sequencing as well as Southern blot hybridization with type I and type II polyketide synthase (PKS) probes. Surprisingly, we found another set of type II SKS genes only 10-kb from the original PKS genes, salABCDE. The DNA sequence revealed two complete open reading frames (ORFs) named salB2 and salC2, and one partial ORF that does not resemble any known DNA or deduced protein sequence. The salC2 should code for chain length determining factor while the deduced amino acid sequence encoded by salB2 exhibits high similarity to .betha.-ketoacyl synthase from different PKS gene clusters. The highest identity was found for .betha.-keetoacyl synthases from S. argillaceus (MtmP. 59.1% identity), the mithramycin producer and from S. venezuelae ISP5230 (JadA, 52.3% identity), the jadomycin producer. The SalC2 protein clearly resembles its counterparts in order aromatic PKS gene clusters that are believed to influence the length of the polyketide chain. The highest identities observed were to that of S. argillaceus (MtmK, 62.3%) and S. venezuelae ISP 5230 (JadB, 55.1%) proteins, Moreover, the deduced amino acid sequences of the salB2 and salC2 products were 29.0% identical.

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Realistic Analysis Method for Continuously Block-Placed Mass Concrete Structures Considering Block Size and Sequence of Concrete Placement (매스 콘크리트 구조물의 연속 분할타설시 타설블록의 크기 및 타설순서를 고려한 합리적인 수화열 해석)

  • 오병환;전세진;유성원
    • Journal of the Korea Concrete Institute
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    • v.11 no.3
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    • pp.59-67
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    • 1999
  • The mass concrete structures are generally constructed in an incremental manner by deviding the whole structures by a series of many blocks. The temperature and stress distributions of any specific block are continuously affected by the blocks placed before and after the specific block. For an accurate analysis of mass concrete structures, the sequence of all the blocks must be accordingly considered including the change of material properties with time for those blocks considered. The purpose of this study is to propose a realistic analysis method which can take into account not only the influence of the sequence, time interval and size of concrete block placement on the temperatures and stresses, but also the change of material properties with time. It is seen from this study that the conventional simplified analysis, which neglects material property changes of some blocks with time and does not consider the effect of adjacent blocks in the analysis, may yield large discrepancies in the temperature and stress distributions of mass concrete structures. This study gives a method to choose the minimum number of blocks required to obtain reasonably accurate results in analysis. The study provides a realistic method which can determine the appropriate size and time interval of block placement, and can be efficiently used in the design and construction of mass concrete structures.

The Role of L1 and L2 in an L3-speaking Class

  • Kim, Sun-Young
    • Cross-Cultural Studies
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    • v.24
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    • pp.170-183
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    • 2011
  • This study explored how a Chinese college student who previously had not reached a threshold level of Korean proficiency used L1 (Chinese) and L2 (English) as a tool to socialize into Korean (L3) culture of learning over the course of study. From a perspective of language socialization, this study examined the cross-linguistic influence of L1 and L2 on the L3 acquisition process by tracing an approach to language learning and practices taken by the Chinese student as a case study. Data were collected through three methods; interview protocols, various types of written texts, and observations. The results showed that the student used English as a means to negotiate difficulties and expertise by empowering her L2 exposure during the classroom practices. Her ways of using L2 in oral practices could be characterized as the 'Inverse U-shape' pattern, under which she increased L2 exposure at the early stage of the study and shifted the intermediate language to L3 at the later stage of the study. When it comes to the language use in written practices, the sequence of "L2-L1-L3" use gradually changed to the "L2-L3" sequence over time, signifying the importance of interaction between L2 and L3. However, the use of her native language (L1) in a Korean-speaking classroom was limited to a certain aspect of literacy practices (i.e., vocabulary learning or translation). This study argues for L2 communication channel in cross-cultural classrooms as a key factor to determine sustainable learning growth.

Effect of load eccentricity on buckling behavior of FRP composite columns with open and closed cross sections

  • M Kasiviswanathan;M Anbarasu
    • Advances in Computational Design
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    • v.8 no.1
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    • pp.61-76
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    • 2023
  • Fiber reinforced polymer (FRP) columns are increasingly being used in various engineering fields due to its high strength to weight ratio and corrosion resistance. Being a thin-walled structure, their designs are often governed by buckling.Buckling strength depends on state of stress of elements which is greatly influence by stacking sequence and various inaccuracies such as geometric imperfections and imperfections due to eccentricity of compressive load and non-uniform boundary conditions. In the present work, influence of load eccentricity on buckling strength of FRP column has been investigated by conducting parametric study. Numerical analyses were carried out by using finite element software ABAQUS. The finite element (FE) model was validated using experimental results from the literature, which demonstrated good agreement in terms of failure loads and deformed shapes.The influence of load eccentricity on buckling behavior is discussed with the help of developed graphs.