• The Korean Journal of Mycology
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• v.44 no.4
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• pp.233-239
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• 2016

A survey of the indigenous fungal resources of Korea was undertaken during 2014-2015. All specimens collected in this study were identified at the species level, based on their morphological characteristics and rDNA sequence data. Among them, 12 macrofungal species, viz. Agaricus guizhouensis, Amanita orientifulva, Armillaria cepistipes, Crepidotus inhonestus, Daldinia childiae, Elmerina cladophora, Lycoperdon scabrum, Marasmius brunneoaurantiacus, Otidea bufonia, Pluteus hongoi, Pluteus variabilicolor, and Russula grisea have not been previously reported in Korea.

• Journal of Species Research
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• v.6 no.3
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• pp.241-257
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• 2017

After the first record of a Korean ciliate in 1931, more than 130 papers have been published describing Korean ciliates. Of these records, the years 1997, 2012, and 2016 include milestone publications in Korea. Even though the publications provide summarized data about Korean ciliates with relevant literature citations, these publications included two nomenclatural errors, two misspellings, and one misidentification; nine species were transferred to other genera. Furthermore, the type specimens deposited in the laboratory of Prof. Joong Ki Choi (Inha University, Korea) were transferred to the National Marine Biodiversity Institute of Korea (MABIK) because of his retirement. Here, we provide an updated list of 331 Korean species described by 2016 and present information about the type specimens. We also and address the aforementioned problems with bringing together scattered data related to ciliate lists.

• Korean Journal of Environmental Biology
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• v.35 no.4
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• pp.604-621
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• 2017

This research was conducted to find the indigenous diatom species unrecorded in Korea from February to December 2016. The samples were taken at 28 sites of the coastal regions on the west coast of Korea and Jeju Island. Diatoms were collected mostly from sand and mud of tidal flats, including gravel, seaweed on the bottom and macrophytes floating in the seawater. Diatom specimens were observed by means of light and scanning electron microscopy. Twenty one species were discovered and added as new specimens to the Korean diatom flora, which are divided into 9 orders, 12 families, and 16 genera. The list and photographs of the species are included with the description of the morphological characteristics and distribution in Korea.

• The Korean Journal of Mycology
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• v.49 no.3
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• pp.351-362
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• 2021

Penicillium is the most common fungal genus in various terrestrial and marine environments. The number of new and unrecorded Penicillium species from various substrates and habitats are continuously increasing. As part of a project to discover indigenous fungi in South Korea, three unrecorded Penicillium species were isolated from mudflats and seaweeds. Based on morphological characteristics and phylogenetic analyses of β-tubulin and calmodulin loci, they were identified as P. amaliae, P. infrabuccalum, and P. manginii. Here, we provide a detailed morphological description and sequence information of these previously unrecorded species.

• Korean Journal of Environmental Biology
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• v.36 no.3
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• pp.299-307
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• 2018

Samples were collected from planktonic habitats of the fresh and brackish waters in Korea from August 2016 to May 2018. As a result, three genera and nine species were newly recorded in Korea. The unrecorded indigenous genera were Anathece, Chondrocystis and Geminocystis, and nine species were Anabaenopsis arnoldii, Anathece smithii, Chondrocystis dermochroa, Coelosphaerium aerugineum, Eucapsis microscopica, Geminocystis herdmanii, Microcystis panniformis, Synechococcus nidulans and Woronichinia karelica. Anathece smithii, Coelosphaerium aerugineum, Eucapsis microscopica, Microcystis panniformis and Synechococcus nidulans had been reported to inhabit freshwater, but these were found in brackish water in this study. Microcystis panniformis, which is a potential genus for causing green-tide, is taxonomically valuable in Korea.

• Journal of Ecology and Environment
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• v.37 no.4
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• pp.231-244
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• 2014

A study on indigenous diatoms was carried out at 49 sites from November 2008 to December 2012 in the marine and brackish plankton and benthic ecosystem in Korea. The structure of small-sized pennate diatoms was examined by means of light and scanning electron microscopy. Twenty species of diatoms were newly identified and divided into five orders, 18 families, and nine genera in this study. The nomenclature, references, specimens examined, specimen descriptions, photographs, and distribution profiles are reported here. The newly reported pennate diatoms imply several reasons why these taxa have not been recorded previously in Korea and we present the strategy to understand the diversity of diatoms in Korea.

• Journal of Environmental Impact Assessment
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• v.27 no.2
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• pp.114-123
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• 2018

For conservation of biodiversity, we designate and manage the major areas that are habitats of organisms as ecosystem protected areas. It is necessary to evaluate the biodiversity of protected areas relatively in order to establish strategies to protect and secure the biodiversity of protected areas. In this study, we selected evaluation indicators by which we can compare objectively the biodiversity of protected areas corresponding to forest ecosystem, and applied them to Mt. Jiri and Mt. Bukhan National Parks. We reviewed literatures to select evaluation criteria. Frequently mentioned criteria and the structure of the forest which plays an importantrole of forest biodiversity were selected as the evaluation criteria. As the result, the selected evaluation indicators were 7-species diversity, species richness, evenness, rarity, disturbance species, indigenous species, and forest structure. In Mt. Jiri and Mt. Bukhan National Parks, species diversity were 3.492 and 2.943, species richness were 8.998 and 9.793, evenness were 0.849 and 0.680,rarity were 11.976 and 10.783, and disturbance species index were 0.214 and 0.357 respectively. Both national parks had abundant indigenous species and showed various forest physiognomies and stable 4-layer structure. It was found that crown density was higher in Mt. Jiri. Most indicators were implied high biodiversity in Mt. Jiri and Mt. Bukhan national parks.

• Journal of Species Research
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• v.5 no.2
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• pp.235-240
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• 2016

To investigate the indigenous prokaryotic species diversity in Korea, various environmental samples from diverse ecosystems were examined taxonomically. The isolated bacterial strains were identified based on 16S rRNA gene sequences, and those exhibiting at least 98.7% sequence similarity with known bacterial species but never reported in Korea were selected as unrecorded species. As an outcome of this study, 10 unrecorded bacterial species belonging to the phylum Firmicutes were discovered from various sources such as soil, tidal flat, fresh water, sea water, kimchi and gut of Fulvia mutica. The unrecorded species were assigned to 7 different genera of 5 families, namely Bacillus and Ornithinibacillus of Bacillaceae, Exiguobacterium of Exiguobacteriaceae, Brevibacillus and Paenibacillus of Paenibacillaceae, Staphylococcus of Staphylococcaceae, and Lactococcus of Streptococcaceae. The selected isolates were subjected to further taxonomic characterization including the analysis of Gram reaction, cellular and colonial morphology, biochemical activities, and phylogenetic trees. The descriptive information on the 10 unrecorded species are provided.

• Journal of Species Research
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• v.9 no.3
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• pp.204-209
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• 2020

In 2019, as a subset study to discover indigenous yeast species in Korea, a total of 20 yeast species were isolated from soil samples collected in Pochoen-si. Among them, eight strains were unreported species. From the high 26S rRNA gene sequence similarity and formation of a robust phylogenetic clade with the closest species, it was determined that each strain belonged to independent and predefined yeast species. The 20 strains were assigned to the genera Aureobasidium (1 strain) and Meyerozyma (1 strain) of the phylum Ascomycota and Cystofilobasidium (2 strains), Filobasidium (1 strain), Naganishia (2 strains), Bullera (3 strains), Leucosporidium (9 strains) and Sampaiozyma (1 strain) of the phylum Basidiomycota. There is no official report of the following species in Korea: Leucosporidium creatinivorum (4 strains), Leucosporidium escuderoi(2 strains), Leucosporidium golubevii(1 strain) and Leucosporidium intermedium (2 strains). Basic biochemical characteristics, colony and cell morphology are also described in the species description section.

• Asian-Australasian Journal of Animal Sciences
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• v.21 no.3
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• pp.314-319
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• 2008

Duck (Anas platyrhynchos) is one of the most important domestic avian species in the world. In the present research, fifteen polymorphic microsatellite markers were used to evaluate the diversity and population structure of 26 Chinese indigenous duck breeds across the country. The Chinese breeds showed high variation with the observed heterozygosity (Ho) ranging from 0.401 (Jinding) to 0.615 (Enshi), and the expected heterozygosity (He) ranging from 0.498 (Jinding) to 0.707 (Jingjiang). In all of the breeds, the values of Ho were significantly lower than those of He, suggesting high selection pressure on these local breeds. AMOVA and Bayesian clustering analysis showed that some breeds had mixed together. The FST value for all breeds was 0.155, indicating medium differentiation of the Chinese indigenous breeds. The FST value also indicated the short domestication history of most of Chinese indigenous ducks and the admixture of these breeds after domestication. Understanding the genetic relationship and structure of these breeds will provide valuable information for further conservation and utilization of the genetic resources in ducks.