• 제목/요약/키워드: Indica Rice

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Disentangling Evolutionary Pattern and Haplotype Distribution of Starch Synthase III-1 (SSIIIb) in Korean Rice Collection

  • Bhagwat Nawade ;Yong-Jin Park
    • Proceedings of the Korean Society of Crop Science Conference
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    • 한국작물학회 2022년도 추계학술대회
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    • pp.214-214
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    • 2022
  • Soluble starch synthases (SSs) elongate α-glucans from ADP-Glc to the glucan nonreducing ends and play a critical role in synthesizing resistant starch in the rice. A total of 10 SSs isoforms were reported in rice, including granules-bound starch synthase I (GBSSI), GBSSII, starch synthase I (SSI), SSIIa (SSII-3), SSIIb (SSII-2), SSIIc (SSII-1), SSIIIa (SSIII-2), SSIIIb (SSIII-1), SSIVa (SSIV-1), and SSIVb (SSIV-2). SSIII proteins are involved in forming the B chain and elongating cluster filling chains in amylopectin metabolism. The functions of SSIIIb (SSIII-1) are less clear as compared to SSs. Here, we sought to shed light on the genetic diversity profiling of the SSIII-1 gene in 374 rice accessions composed of 54 wild-type accessions and 320 bred cultivars (temperate japonica, indica, tropical japonica, aus, aromatic, and admixture). In total, 17 haplotypes were identified in the SSIII-1 coding region of 320 bred cultivars, while 44 haplotypes were detected from 54 wild-type accessions. The genetic diversity indices revealed the most negative Tajima's D value in the temperate-japonica, followed by the wild type, while Tajima's D values in other ecotypes were positive, indicating balancing selection. Nucleotide diversity in the SSIII-1 region was highest in the wild group (0.0047) while lowest in temperate-japonica. Lower nucleotide diversity in the temperate-japonica is evidenced by the negative Tajima's D and suggested purifying selection. The fixation index (FST) revealed a very high level of gene flow (low FST) between the tropical-japonica and admixture groups (FST=-0.21) followed by admixture and wild groups (-0.04), indica and admixture groups (0.02), while low gene flow with higher FST estimates between the temperate-japonica and aus groups (0.72), tropical-japonica and aromatic groups (0.71), and temperate-japonica and admixture groups (0.52). Taken together, our study offers insights into haplotype diversity and evolutionary fingerprints of SSIII-1. It provides genomic information to increase the resistant starch content of cooked rice.

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A Study on the Japonica Rice Farming in Rural China and Korea (중국의 자포니카 벼 재배와 한국 농촌)

  • Lim, Hyung-Baek;Bae, Sung-Eui;Yoon, Jun-Sang
    • Journal of Agricultural Extension & Community Development
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    • 제10권1호
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    • pp.103-114
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    • 2003
  • The purpose of this study is to examine Japonica rice farming of China. Asian rice is divided into Japonica and Indica species. Japonica rice represents only less than 20% of Chinese rice output, but it can compete with Korea rice in both price and quality. The rise of income level has expanded the scale of production of Japonica rice in China. China’s adhesion to the World Trade Organization (WTO) has forced Chinese policy makers to face their obligations and responsibilities such as abolishing subsidies on agricultural exports. But being member of the WTO entry also helps China exercise and enhance its influential place in the global economy. Because of geographical proximity and the fact that Korea is ranked second among countries with which China still has a trade deficit, China may seek and plead for an opening of the protected Korean rice market to stabilize prices and prevent excess supply of Chinese rice. Though Korean rice farmers feel that prices are still low, Chinese rice remains far cheaper than Korean rice with the price gap is still on the rise. In anticipation of such fierce competition, Korea must carefully review its current policies and closely follow the evolution of rice production, marketing, and trade in China. This study also suggests some of the possible research using more recent data that should be conducted in the future.

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Development of Brown Rice Separator Using Electrostatic Properties of Rice -Electrostatic Properties of Rice- (정전특성(靜電特性)을 이용(利用)한 현미(玄米) 분리기(分離機)의 개발(開發)에 관한 기초(基礎) 연구(硏究) - 벼의 정전특성(靜電特性)에 관하여 -)

  • Noh, S.H.;Yoon, Y.K.;Lee, J.W.
    • Journal of Biosystems Engineering
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    • 제17권3호
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    • pp.272-284
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    • 1992
  • As a preliminary step toward the development of a multipurpose electrostatic separator for agricultural use, this study investigated the effect of moisture level, geometrical characteristics and the electric field strength of a charging device on the electrostatic charging of brown rice, unhulled paddy, small stones and broken rice that are produced during the milling process. The results are summarized as follows. 1. Average electrostatic charge per unit mass of paddy is greater than that of brown rice. 2. Charge per unit mass of rice kernel increases linearly with moisture content and electric field strength of the charging device, presenting no correlations with length or thickness of rice kernel. 3. Frequency distributions in electrostatic charge per unit mass of paddy and brown rice kernels indicated that the portion, not overlapped, ranged from 10 to 29% with Japonica rice and from 32 to 49% with Indica rice. 4. The difference in moisture content between paddy and brown rice must be over 6%, if they are to be electrostatically separated to over 95%. 5. Theoretical portions of brown rice to be separated from a mixture primarily by the electrostatic charge and secondarily by the length or by the thickness were 95~100% and 27~76%, respectively. 6. Frequency distribution of electrostatic charge for broken kernels overlapped that of paddy and brown rice, which the small stones didn't.

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THE POTENTIALS OF HULLING HIGH-MOISTURE PADDY

  • Pasikatan, M.C.;Manaligod, H.T.;Barredo, I.R.;Lantin, R.M.;Bell, M.A.
    • Proceedings of the Korean Society for Agricultural Machinery Conference
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    • 한국농업기계학회 1996년도 International Conference on Agricultural Machinery Engineering Proceedings
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    • pp.926-936
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    • 1996
  • Field hulling of high-moisture paddy followed by brown rice drying offers many advantages over the present paddy harvesting and drying offers many advantages over the present paddy harvesting and drying system. We did a preliminary study of the parameters for efficient hulling of high-moisture paddy using the IRRI Centrifugal Huller and two India rice varieties. Hulling capacity , hulling efficiency , brown rice recovery and percent whole bown rice were generally best at the impeller peripheral speed of 44m/s. A second pass through the huller increased hulling capacity , brown rice revery and hulling efficiency, but reduced percent whole brown rice. To solve this , we recommed separation of paddy after hulling and aspiration such that only unhulled and partially -hulled grains will be fed back to the huller. Paddy at even 23% m.c. could be effectively hulled by the impeller-type huller , but the results were generally better at 14 to 17% m.c. Only in percent whole brown rice did the 17 to 23% m.c. range performed better than that of 14% m.c. Difference invarietal response to hulling was observed.

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Establishment of Ac/Ds-Mediated Gene Tagging Systems in Indica Type Rice

  • Yun, Doh-Won;Cha, Young-Soon;Lim, Myung-Ho;Yi, Gi-Hwan;Won, Yong-Jae;Ko, Jong-Min;Nam, Min-Hee;Sun, Bingyao;Han, Chang-Deok;Eun, Moo-Young
    • Proceedings of the Korean Society of Plant Biotechnology Conference
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    • 한국식물생명공학회 2003년도 추계학술대회 발표논문 초록집
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    • pp.86-86
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    • 2003
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Insertional Mutation of the Rice Blast Resistance Gene, Pi-b, by Long Terminal Repeat of a Retrotransposon

  • Jwa, Nam-Soo;Lee, Yong-Hwan
    • The Plant Pathology Journal
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    • 제16권2호
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    • pp.105-109
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    • 2000
  • The Pi-b is the rice gene conferring race specific resistance to the blast fungus Magnaporthe grisea race having a corresponding avirulence gene, AVR-Pi-b. All resistant cultivars have two copies of the Pi-b gene, but susceptible cultivars have a single copy of the gene. About 1 Kbp insertion sequence was detected in the open reading frame of the Pi-b gene from the susceptible cv. Nipponbare. The nature of insertion sequence was identified as a solo long terminal repeat (LTR) of new rice Tyl-copia-like retrotransposon. LTR was widely distributed in the rice genome. Various types of different patterns of restriction fragment length polymorphism of LTR were detected in indica cultivars, whereas a single type was detected from japonica cultivars. The insertion of LTR sequence in the Pi-b gene in the susceptible cultivar suggested that retrotransposon-mediated insertional mutation might played an important role in the resistance breakdown as well as evolution of resistance genes in rice.

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Studies on the Effects of Temperature During the Reduction Division and the Grain Filling Stage in Rice Plants I. Effect of Temperature at the Reduction Division Stage in Indica-Japonica Crosses (수도의 감수분열기 및 등숙기에 있어서 온도반응에 관한 연구 제1보 수도 indica $\times$ Japonica품종의 감수분열기에 있어서의 저온의 영향)

  • Kim, Kyu-Chin
    • KOREAN JOURNAL OF CROP SCIENCE
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    • 제28권1호
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    • pp.41-57
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    • 1983
  • The effect of temperature 'during the reduction division stage on the Indica-Japonica rice varieties were studied in artificial temperature-controlled cabinets (Bioclimatic Laboratory). Varieties used were indica-japonica crosses (Suweon 264, Suweon 258, Milyang 29), indica (IR36, Lengkwang) and japonica rice (Jin-heung). The results obtained from this study are summarized as follows. The most sensitive stage to low temperature, the tetrad stage, was observed in each variety with the following auricle distance: Jinheung, -12cm; IR36, -3cm; Suweon264, -9cm; Suweon258, -3cm; Milyang29, -6cm and Lengkwang, +1cm. The tetrad stage occured when the palea elongation was about 50 to 60% of the final palea length at flowering stage in all varieties. The percentage of degenerated spikelets at tetrad as influenced by low-temperature treatment was very low in Jinheung and Lengkwang, but very high in IR36. In indica-japonica crosses only the 7-days treatments had a very high percentage. Between the 4-day and 7-day treatments as well as among all varieties, clear differences were observed in the low temperature induced sterility of 'special spikelets' (upper position grains at tetrad). In the 7-day treatments except in Lengkwang, all varieties showed very high sterility. It appears that the treatments is over the critical limit for treatment. However in the 4-day treatments, the intervarietal differences in sterility were very clear. In Jinheung, sterility was 46.8%; IR36, 67.6%; Suweon264, 60.9%, Milyang29, 62.2%; Lengkwang, 27.8%. A close relationship was observed between fertility and auricle distance. The lowest fertility of special spikelets was at the tetrad stage and the first contraction phase. Before and after the stage there was an increase in fertility. The palea length elongated nearly in a straight line from the spikelet formation stage to flowering. And there was a high correlation between palea length and auricle distance. distance.

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Effect of Mixed Application of Cinosulfuron with Dymron on Rice (Cinosulfuron과 Dymron의 혼합처리(混合處理)가 수도(水稻)(Oryza sativa L.)의 초기생육(初期生育)에 미치는 영향(影響))

  • Choi, Y.S.;Kim, K.U.;Shin, D.H.
    • Korean Journal of Weed Science
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    • 제12권2호
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    • pp.110-123
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    • 1992
  • To investigate the safening effect of dymron against cinosulfuron, the responses of 104 rice cultivars and lines to single and mixture treatments of cinosulfuron [3-(4.6-dimethoxy-1,3,5-triazin-2-yl)-1-[2-(2-methoxyethoxy)-phenylsulfonyl]-urea] and dymron [1-(${\alpha}$, ${\alpha}$-dimethylbenzyl)-3-p-tolyl urea] were evaluated. The responses of 104 rice cultivars and lines to cinosulfuron were differed. Among the rice cultivars, growth of Calrose, Dasukei, Hwajinhyeo, and Milyang 105 was significantly inhibited by cinosulfuron but there was no inhibition in Daeseongbyeo, Iri 371, Jangseongbyeo, Taebaegbyeo and IR 74. The japonica types were generally inhibited more than the indica and indica${\times}$japonica types. When Kwangmyungbyeo was treated with the mixtures of cinosulfuron 48g and 96g ai/ha with dymron 450g ai/ha, the inhibition of plant height was significantly reduced regardless of dymron concentrations. With increase in cinosulfuron concentration, the safening effect of dymron against cinosulfuron was more evident in plant height than fresh weight. On the other hand, dymron did not have any safening effects of cinosulfuron on Echinochloa crus-galli at any concentrations. The mixtures of dymron and cinosulfuron produced antagonistic effects on the plant height regardless of rice cultivars and treatment concentrations. At cinosulfuron 24g ai/ha, the effects of the mixtures of cinosulfuron and brassinolide on the plant height of Kwangmyungbyeo and IR 74 were similar irrespective of brassinolide concentrations but the inhibition of Kwangmyungbyeo was greater than that of IR 74 as the concentrations of cinosulfuron increased. The effects of the mixtures of cinosulfuron at concentration of 96g ai/ha with various ABA levels on the plant height of both Kwangmyungbyeo and IR 74 showed synergistic effect regardless of ABA concentration. However, the response of fresh weight of both cultivars treated with cinosulfuron at 96g ai/ha with ABA synergisism was observed in Kwangyungbyeo while IR 74 showed antagonism.

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Direct Seeding Cultivation on Submerged Paddy in Rice II. Dissolved Oxygen Uptake and Germination Properties of Rice Varieties in the $O_2$ Saturated Water (벼 담수토중 직파 재배 연구 II. 벼 품종의 수중발아시 용존산소 흡수와 발아특성)

  • Lee, Chul-Won;Seong, Ki-Yeong;Park, Seok-Hong;Park, Rae-Kyeong;Cho, Dong-Sam
    • KOREAN JOURNAL OF CROP SCIENCE
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    • 제33권1호
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    • pp.97-101
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    • 1988
  • The objective of this paper was to examine the oxygen requriement of rice seeds when the seeds were germinating under the water. The trial was carried out in the laboratory with the different water temperature (25$^{\circ}C$, 17$^{\circ}C$) in the Crop Experiment Station, Suwon. The tested varieties were 6 in japonica and 6 in indica (I) ${\times}$ japonica (J). In the 25$^{\circ}C$ water temperature rice seeds absorbed more dissolved oxygen (DO) and germinating duration was shorter than in the 17$^{\circ}C$ water temperature. DO uptake of japonica rice seeds was faster than that of indica ${\times}$ japonica rice seeds, and the germinating ratio of japonica rice seeds was higher than that of I${\times}$J rice seeds in the water. DO requirements of germinating rice seeds in the water were average 82.4 ${\mu}$g per seed up to coleoptile appearance and average 123.6 ${\mu}$g per seed up to appearance of radicle in the japonica varieties, but I${\times}$J varieties were 96.9 ${\mu}$g and 145.1 ${\mu}$g respectively. Especially when the rice seeds were germinated in the water, length of coleoptile and radicle of japonica rice were significantly longer than those of I${\times}$J rice varieties.

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