• Title/Summary/Keyword: IAA

Search Result 650, Processing Time 0.026 seconds

Dynamics of the mobile insert helix in the domain III-IV of Aux/IAA17 probed by site-directed spin labeling and paramagnetic NMR spectroscopy

  • Han, Mookyoung;Suh, Jeong-Yong
    • Journal of the Korean Magnetic Resonance Society
    • /
    • v.19 no.2
    • /
    • pp.61-66
    • /
    • 2015
  • The plant hormone auxin is involved in all stages of plant development. Aux/IAAs are the transcriptional repressors that bind to the Auxin Response Factors (ARFs) to regulate the gene expression upon auxin release. Aux/IAA have highly conserved C-terminal domains (domains III-IV) that mediate both homotypic and heterotypic interactions between Aux/IAA and ARF family proteins. Recent studies revealed that the conserved domains III-IV share a common ${\beta}$-grasp fold that oligomerizes in a front-to-back manner. In particular, Aux/IAA contains a mobile insert helix in the domain III-IV, whereas ARFs do not. Here, we investigated the dynamics of the insert helix using paramagnetic NMR spectroscopy. The insert helix exhibited fast motions in the ps-ns time scale from $^{15}N$ relaxation data, but the amplitude of the motion is likely limited to the local neighborhood. Our result suggests that the motion of the helix may have functional implications in protein-protein interactions for transcriptional regulations.

Characterization of auxin production plant growth promotion by a bacterium isolated from button mushroom compost

  • Yoo, Ji-Yeong;Lee, Heon-Hak;Han, Chang-Hoon;Yoon, Min-Ho
    • Journal of Mushroom
    • /
    • v.15 no.1
    • /
    • pp.8-13
    • /
    • 2017
  • An auxin-producing bacterial strain, designated 4-3, was isolated from waste button mushroom compost in Boryeong-si, Chungnam. The strain 4-3 was classified as a novel strain of Leucobacter tardus, based on chemotaxonomic and phylogenetic analyses. TLC and HPLC the isolated L. tardus strain 4-3 produced indole-3-acetic acid (IAA), the auxin. Maximum IAA productionof $94.3mg\;L^{-1}$ was detected for bacteria cultured in R2A medium with 0.1% l-tryptophan, incubated for 24 h at $35^{\circ}C$. Negative correlationwas observed between IAA production and pH of the culture medium, indicating that the increase inIAA caused acidification ofthe medium. The effect of supplementation with varying concentrations of l-tryptophan, a known precursor of IAA, was also assessed. production was maximal at 0.1% l, but decreased at lconcentrations above 0.2%. To investigate the plant growth-promoting effects of the bacterium, L. tardus strain 4-3 culture broth was used to inoculate water cultures and seed pots of mung bean. We found thatadventitious root induction and root growth were 2.2-times higher in thethan in the non-inoculated plants.

Effects of IAA, IBA, and Media on Growth and Saikosaponin Biosynthesis in Bupleurum falcatum Hairy Root Culture (시호 모상근 배양에서 생장과 시호 사포닌 생합성에 미치는 배지와 IAA 및 IBA의 영향)

  • Ahn, Jun Cheul;Kim, Eung Sik;Lee, Hyun Jin;Hwang, Baik
    • Korean Journal of Plant Tissue Culture
    • /
    • v.26 no.3
    • /
    • pp.171-175
    • /
    • 1999
  • We examined the effects of various basal media and exogenous auxins on the growth and saikosaponin production in hairy root cultures of Bupleurum falcatum. Of the various media tested, 2RCM medium was superior for growth and saikosaponin content, in which saikosaponin a, c, and d was produced, however MS medium was resulted in extremely low level in saikosaponin production. By the treatment of 0.5 mg/L IBA the growth rate was increased by about 60% in 2RCM medium, whereas both IAA and IBA showed a potent inhibition effect in saikosaponin biosynthesis by the treatment of 0.01 mg/L~5mg/L.

  • PDF

Development of an Integrated IaaS+PaaS Environment for Providing Cloud Computing Service in a BIM Platform for Harbor Facilities (항만 BIM 플랫폼의 클라우드 서비스를 위한 IaaS+PaaS 통합 환경 개발)

  • Moon, Hyoun-Seok;Hyun, Keun-Ju;Kim, Won-Sik
    • Journal of KIBIM
    • /
    • v.9 no.4
    • /
    • pp.62-74
    • /
    • 2019
  • Because the existing BIM platform is based on user services, the focus is on the development of SaaS (Software as a Service), which provides business services online. However, since a harbor is a security facility, the harbor BIM platform is preferably provided in a private form, rather than relying on the infrastructure environment provided by external cloud providers. Therefore, this study analyzes and reviews the main functions to be provided as SaaS services of the harbor BIM platform. The goal is to build a cloud-based harbor BIM platform that can provide this service to users. To this end, we built IaaS (Infrastructure as a Service) environment of the harbor BIM platform based on the open source Open Stack and integrate and develop PaaS environment with Open Shift applied with IaaS. We applied the GPU to the harbor BIM platform to verify the performance of the harbor BIM platform, and found that the rendering and loading times are improved. In particular, it is expected to reduce the cost of introduction and provide it as the basic cloud environment of similar BIM platform for infrastructure facilities.

Computational Study on the Binding of Aux/IAA17 and ARF5 Involved in Auxin's Transcriptional Regulation using Molecular Docking

  • Kwon, Sohee;Lee, Gyu Rie;Seok, Chaok
    • Proceeding of EDISON Challenge
    • /
    • 2017.03a
    • /
    • pp.16-26
    • /
    • 2017
  • Auxin response factor (ARF) and Aux/IAA transcriptional repressor family proteins play a major role in auxin's signalling process. Using the GALAXY protein modelling programs, monomer, dimer and oligomer structures of Aux/IAA17 and ARF5 protein were predicted based on the known experimental structures. By analysing the proposed complex structures, key interacting residues on binding site could be determined, and further suggestions for experimental studies were made.

  • PDF

Embryogenesis and Regeneration from Anther Cultures of Bupleurum falcatum L. (시호의 약배양의 통한 배발생 및 재분화)

  • 권순태;정형진;김길웅
    • Journal of Life Science
    • /
    • v.11 no.4
    • /
    • pp.340-345
    • /
    • 2001
  • Effects of growth regulators(2,4-D, IAA, NAA, BA and kinetin) and chilling treatment on callus induction. embryogenesis and regeneration through anther cultures of B. falcatum L. were examined. Frequency of callus induction and embryogenesis was effectively increased by the treatment of chilling at 5$^{\circ}C$ for 10 days before anther inoculation. Optimal level of growth regulator for callus induction and embryogenesis from anther was 2,4-D 1.0 mg/L in Murashige and Skoog(MS) basal medium supplemented with 30 g/L sucrose, 8 g/L agar. Frequency of embryogenesis from anther derived callus was increased up to 48% or 45% by addition of IAA 0.1+ kinetin 1.0 mg/L of IAA 0.1+ BA 1.0 mg/L in MS medium, respectively, Optimal medium for obtaining green callus was MS basal supplemented with BA 1.0mg/L. Addition of auxins(IAA or NAA) inhibited the formation of green callus from anther derived callus.

  • PDF

Effect of Endogenous IAA Transport on Adventitious Root Formation in Phaseolus vulgaris Hypocotyl Cuttings (강낭콩 하배축 절편의 부정근형성에 미치는 내재 IAA의 이동)

  • 조덕이
    • Journal of Plant Biology
    • /
    • v.32 no.4
    • /
    • pp.323-330
    • /
    • 1989
  • This work was carried out to elucidate effects of endogenous and exogenous IAA transport on adventitious root formation in Phaseolus vulgaris hypocotyl cuttings. For inverted or normal incubation in distilled water, the adventitious root is always formed at the morphological base but not at the morphological apex. For inverted incubation, in both distilled water and certain chemical solution, the root formation is retarded more at the first stage (0-24 hr) than at the second stage (24-48 hr). When p-chlorophenoxyisobutyric acid (PCIB) was applied to the cuttings at the first stage, theroot formation was inhibited more than at the second stage. Treatment of 2,3,5-triiodobenzoic aicd (TIBA)markedly inhibited the adventitious root formation in Phaseolus vulgaris hypocotyl cuttings. This inhibition influenced the root according to the applied stage and period. Therefore, the root formation is more related to the stage of root primordium formation than to the stage of root elongation from the primordium. Inhibition of auxin transport oraction by TIBA or PCIB could also be reversed when hypocotyl cuttings are incubated in exogenously applied IAA solution.

  • PDF

Effectcs of Plant Growth Regulators on Growth and Berberine Production in Cell Suspension Cultures of Thalictrum rugosum (Thalictrum rugosum 세포배양에서 식물생장 조절물질이 세포증식 및 Berberine 생산에 미치는 영향)

  • 김동일
    • Microbiology and Biotechnology Letters
    • /
    • v.18 no.4
    • /
    • pp.327-330
    • /
    • 1990
  • The effects of various plant growth regulators, both auxins and cytokinins, on cell growth and berberine production were investigated in cell suspension cultures of Thafictrum rugosum. Indole-%-acetic acid (IAA) was found to be the best for berberine production among five examined plant growth regulators and the optimum concentration of IAA was 1 $\mu \textrm M$. The enhancement compared to control 2, 4-dichlorophenoxyacetic acid (2, 4-D) was more than 60%. Simultaneous addition of cytokinins such as kinetin and 6-benzylamiroyurine (BA) was inhibitory.

  • PDF

오갈피 나무속(Acanthopanax spry.) 식물의 번식에 관한 연구 -제1보 삽목시 생장조절성질이 발근에 미치는 영향-

  • 안상득;최은옥
    • Journal of Ginseng Research
    • /
    • v.16 no.2
    • /
    • pp.138-145
    • /
    • 1992
  • Rooting test of 5 species plants in Acanthopanax genus was carried out to see the comparative effect of growth regulators NAA IBA and IAA. And the results are summarized as in the following compendia; (1) When hard and soft-wood cutting from new shoot of 5 species were taken and dipping treated with growth regulators such as NAA IBA and IAA at varied concentration levels their roofings were mostly more superior to the control that untreated. And also treatment of NAA and IBA among treated substances were more effective than IAA. (2) The effects on the rooting number and rate made a great difference according to species of Acanthopanax genus even if the same regulator was treated. (3) Decreasing effects of rooting by high concentration obstacle (especially at 2,000 rpm) of NAA and IBA in other species except A. sieboldianum were mostly serious. On the other hand, that in case of IAA treatment was not risen in most species except A. sessiliflorus.

  • PDF

Comparison of Resource Allocation Scheduling in IaaS Cloud (IaaS에서의 자원 할당 스케줄링 기법 비교 및 분석)

  • Kim, Ji-Yeong;Lee, Han-Na;Eom, Young Ik
    • Proceedings of the Korea Information Processing Society Conference
    • /
    • 2013.11a
    • /
    • pp.118-120
    • /
    • 2013
  • 클라우드 컴퓨팅에서 IaaS(Infrastructure-as-a-service)는 서버, 스토리지, 네트워크 등을 가상화 환경으로 만들어 활용할 수 있도록 하는 서비스이다. 이러한 서비스를 통해 기업들은 초기 인프라 비용을 절약하는 등의 장점을 얻을 수 있기 때문에 많은 관심을 가지고 사용하고 있다. 이러한 사용자들의 증가로 물리적인 자원을 바로 증가시키는 대신 가상머신을 통한 자원의 할당을 좀 더 효율적으로 하는 것에 중점을 두게 되었다. 본 논문에서는 기본적으로 사용되는 자원 할당 기법들과 발전되어 제안된 기법 등 5가지 스케줄링 기법을 비교 및 분석한다. 여러 상황에서 각각의 기법은 장점과 단점을 가진다. 분석 결과를 바탕으로, IaaS를 제공하는 기업에서는 사용자들의 편의와 자신들의 상황에 맞는 자원 할당 스케줄링 기법을 선택할 수 있다.