• Title/Summary/Keyword: High-through Sequence

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Lycopersicon Eculentum C2H2-type Zinc Finger Protein Induced by Oxidative Stress Especially

  • Seong, Eun-Soo;Lee, Ji-Yeon;Yu, Chang-Yeon;Yang, Deok-Chun;Eom, Seok-Hyun;Cho, Dong-Ha
    • Journal of Plant Biotechnology
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    • v.34 no.3
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    • pp.167-172
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    • 2007
  • A tomato zinc-finger protein gene, LeZFP1, encoding the Cys2/His2-type zinc-finger transcription factor was searched from cDNA microarray analysis of gene expression following induction of the overexpressed tomato transgenic plants showing resistance for pathogen and abiotic stresses. The full-length cDNA of LeZFP1 encoded a protein of 261 amino acid residues. Analysis of the deduced amino acid sequence of LeZFP1 revealed that it shares high sequence identity with pepper CAZFP1 (81% identity). We found that single copy of LeZFP1 gene is present in the tomato genome through southern blot analysis. The LeZFP1 transcripts were constitutively expressed in the tomato mature and young leaves, but were detectable weakly in the flower, stem and root. The LeZFP1 transcripts were significantly reduced in treated leaf tissues with NaCl and mannitol. The LeZFP1 gene was induced by oxidative stress especially. Our results indicated that LeZFP1 may play a role function involved in oxidative stress signaling pathways.

Image Encryption Scheme using Complemented MLCA and Special Chaos Map (여원 MLCA와 특수 혼돈 함수를 이용한 영상 암호화 기법)

  • Jeong, Hyun-Soo;Park, Kyu-Chil;Cho, Sung-Jin;Kim, Seok-Tae
    • The Journal of the Korea institute of electronic communication sciences
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    • v.15 no.5
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    • pp.873-880
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    • 2020
  • The proposed encryption algorithm strengthens its security by converting pixel-specific values and changing pixel positions. The state transition matrix created by Wolfram's rule creates a complemented CA sequence with the maximum length. Then, we convert the sequence into a 2D basis image and go through a XOR operation with the original image. The final encrypted image is created by shear stressing and rearranging. The image stability analysis verified that the proposed encryption method has high security.

Genomic Organization of Heat Shock Protein Genes of Silkworm Bombyx mori

  • Velu, Dhanikachalam;Ponnuvel, Kangayam M.;Qadri, Sayed M. Hussaini
    • International Journal of Industrial Entomology and Biomaterials
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    • v.15 no.2
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    • pp.123-130
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    • 2007
  • The Hsp 20.8 and Hsp 90 cDNA sequence retrieved from NCBI database and consists of 764 bp and 2582 bp lengths respectively. The corresponding cDNA homologus sequences were BLAST searched in Bombyx mori genomic DNA database and two genomic contigs viz., BAAB01120347 and AADK01011786 showed maximum homology. In B. mori Hsp 20.8 and Hsp 90 is encoded by single gene without intron. Specific primers were used to amplify the Hsp 20.8 gene and Hsp 90 variable region from genomic DNA by using the PCR. Obtained products were 216 bp in Hsp 20.8 and 437 bp in Hsp 90. There was no variation found in the six silkworm races PCR products size of contrasting response to thermal tolerance. The comparison of the sequenced nucleotide variations through multiple sequence alignment analysis of Hsp 90 variable region products of three races not showed any differences respect to their thermotolerance and formed the clusters among the voltinism. The comparison of aminoacid sequences of B. mori Hsps with dipteran and other insect taxa revealed high percentage of identity growing with phylogenetic relatedness of species. The conserved domains of B. mori Hsps predicted, in which the Hsp 20.8 possesses ${\alpha}-crystallin$ domain and Hsp 90 holds HATPase and Hsp 90 domains.

A Fast Intra Skip Detection Algorithm for H.264/AVC Video Encoding

  • Kim, Byung-Gyu;Kim, Jong-Ho;Cho, Chang-Sik
    • ETRI Journal
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    • v.28 no.6
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    • pp.721-731
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    • 2006
  • A fast intra skip detection algorithm based on the ratedistortion (RD) cost for an inter frame (P-slices) is proposed for H.264/AVC video encoding. In the H.264/AVC coding standard, a robust rate-distortion optimization technique is used to select the best coding mode and reference frame for each macroblock (MB). There are three types of intra predictions according to profiles. These are $16{\times}16$ and $4{\times}4$ intra predictions for luminance and an $8{\times}8$ intra prediction for chroma. For the high profile, an $8{\times}8$ intra prediction has been added for luminance. The $4{\times}4$ prediction mode has 9 prediction directions with 4 directions for $16{\times}16$ and $8{\times}8$ luma, and $8{\times}8$ chrominance. In addition to the inter mode search procedure, an intra mode search causes a significant increase in the complexity and computational load for an inter frame. To reduce the computational load of the intra mode search at the inter frame, the RD costs of the neighborhood MBs for the current MB are used and we propose an adaptive thresholding scheme for the intra skip extraction. We verified the performance of the proposed scheme through comparative analysis of experimental results using joint model reference software. The overall encoding time was reduced up to 32% for the IPPP sequence type and 35% for the IBBPBBP sequence type.

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Development of Electronic White-board Based on Embedded Linux (임베디드 리눅스 기반의 전자 칠판 시스템 개발)

  • Seo, Chang-Jun
    • IEMEK Journal of Embedded Systems and Applications
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    • v.2 no.4
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    • pp.214-220
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    • 2007
  • Recently, most embedded systems have the multi-functions mixed the hardware with the software. The existing sequence programming methods are not suitable to implement the embedded system with multi-functions. So, it can be overcome the limit of a facility implementation by introducing the operating system in system. Also, due to the requirement about the better convenient and comfortable meeting or lecture environment, the necessity of electronic white-board is getting higher. Specially, the education using multimedia information is much more desirable for various and improved lecture at the high school and the university. But the sequence program which have been managed in existing electronic white-board system has some difficulties to achieve the software-oriented systems which has to accomplish many functions. In this paper, we propose the method to implement a facility of electronic white-board through using the embedded linux with excellent performance. The embedded linux presents the powerful software environment for the implementation of an embedded system and makes the realization of many various functions easy because it follows kernel characteristics of linux. In this paper, we describe the details for the structure of hardware, kernel source and device driver of a developed electronic white-board.

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Transformation Behaviour of High Temperature Thermoelectric $FeSi_2$ (고온열전재료 $FeSi_2$의 변태거동)

  • Eun, Young-Hyo;Min, Byoung-Gue;Lee, Dong-Hi
    • Applied Microscopy
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    • v.25 no.3
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    • pp.90-98
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    • 1995
  • In the Fe-Si system, a mixture of a($Fe_{2}Si_5$) - and ${\epsilon}$(FeSi)-composition powders was sintered and heat-treated subsequently at various temperatures and time to get thermoelectric ${\beta}$-phase($FeSi_2$) compacts. The different transformational sequences depending on the heat treating temperature were found through the investigation into phase transformation and microstructural development. That is, a rapid eutectoid decomposition of ${\alpha}{\to}{\beta}+Si$ occurred together with a accompanying slow reaction between the dispersed Si formed by above decomposition and the preexisted ${\epsilon}$ phase at temperatures below $830^{\circ}C$. The unreacted Si and the micropores formed due to the density change upon the transformation coarsened as heat treating time elapsed. At temperatures above $880^{\circ}C$, however, transformation was proceeded by a peritectoid reaction of ${\alpha}+{\epsilon}{\to}{\beta}$. It took at least 200min. to achieve 90% volume fracion of transformed ${\beta}$ phase, and the growth of micro-pores was also observed in this transformational sequence with prolonged heat treating time.

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Gradual Encryption of Image using LFSR and 2D CAT (LFSR과 2D CAT를 이용한 단계적 영상 암호화)

  • Nam, Tae-Hee;Kim, Seok-Tae;Cho, Sung-Jin
    • Journal of the Korea Institute of Information and Communication Engineering
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    • v.13 no.6
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    • pp.1150-1156
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    • 2009
  • In this paper, we propose the gradual encryption method of image using LFSR(Linear Feedback Shift Register) and 2D CAT(Two-Dimensional Cellular Automata Transform). First, an LFSR is used to create a PN(pseudo noise) sequence, which is identical to the size of the original image. Then the created sequence goes through an XOR operation with the original image resulting to the first encrypted image. Next, the gateway value is set to produce a 2D CAT basis function.The created basis function multiplied with the first encrypted image produces the 2D CAT encrypted image which is the final output. Lastly, the stability analysis verifies that the proposed method holds a high encryption quality status.

Purification and Characterization of an Extradiol Dioxygenase Which Preferentially Acts on 4-Methylcatechol

  • Ha, You-Mee;Jung, Young-Hee;Kwon, Dae-Young;Kim, Young-Chang;Kim, Young-Soo;Kim, Chy-Kyung;Min, Kyung-Hee
    • Journal of Microbiology and Biotechnology
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    • v.9 no.3
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    • pp.249-254
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    • 1999
  • A catechol 2,3-dioxygenase (C23O) was purified to apparent homogeneity from Pseudomonas putida SU10 through several purification steps consisting of ammonium sulfate precipitation and chromatographies on DEAE 5PW, Superdex S-200, and Resource-Q. Gel filtration indicated a molecular mass under nondenaturing conditions of about 130 kDa. The enzyme has a subunit of 34 kDa as was determined by SDS-PAGE. These results suggest that the native enzyme is composed of four identical subunits. The N-terminal amino acid sequence (30 residues) of the enzyme has been determined and exhibits high identity with other extradiol dioxygenases. The reactivity of this enzyme towards catechol and methyl-substituted catechols is somewhat different from that seen for other catechol 2,3-dioxygenases, with 4-methylcatechol cleaved at a higher rate than catechol or 3-methylcatechol. $K_m$ values of the enzyme for these substrates are between 3.5 and 5.7 M.

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CCSDS PN PROCESSING SPEED OPTIMIZATION

  • Ahn, Sang-Il;Kim, Tae-Hoon;Koo, In-Hoi
    • Proceedings of the KSRS Conference
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    • 2007.10a
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    • pp.537-539
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    • 2007
  • Telemetry processing system requires minimum bit transition level in data streams to maintain a bit synchronization while receiving telemetry signal. PN code has a capability of providing the bit transition and is widely used in the packet communication of CCSDS. CCSDS PN code that generator polynomial is $h(x)=x^{8}+x^{7}+x^{5}+x^{3}+1$, and the random bit sequence that is generated from this polynomial is repeated with the cycle of 255 bits. As the resolution of satellite image increases, the size and transmission rate of data increases. To process of huge and bulky size of satellite image, the speed of CCSDS PN Processing is very important. This paper introduces the way of improving the CCSDS PN Processing speed through processing 128 bits at one time using the feature of cyclic structure that repeats after first 255 bytes by grouping the random bit sequence with 1 byte and Intel Streaming SIMD Extensions 2. And this paper includes the comparison data of processing speed between SSE2-applied implementation and not-applied implementation, in addition, the measured value of speed improvement.

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Rapid Acquisition of m-sequence Signals by Sequential Estimation with Flexible Structure (가변구조를 갖는 순차 예측 방법을 이용한 m 계열 신호의 고속 포착)

  • 현광민;박상규
    • The Journal of Korean Institute of Communications and Information Sciences
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    • v.27 no.7B
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    • pp.664-672
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    • 2002
  • This paper analyzes a sequential estimator with flexible structure for rapid acquisition of the m-sequence signals. If the received PN chips stored in the estimator's internal registers as initial loading values include one error, this chip with error can be corrected through multiple local PN code generators to achieve high-speed acquisition performance. Hamming distance between regenerated local PN codes from the proposed system and received PN code is compared with given threshold to choose a possible correct path and to declare success of the code acquisition. Using signal flow graph, average acquisition time that depends on detection and false alarm probability is calculated. By modifying generally used matched filter structure for PN code acquisition, the proposed system provides flexible structure and rapid acquisition process.