• Title/Summary/Keyword: Heritability

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Genetic Epidemiological Analysis of Esophageal Cancer in High-incidence Areas of China

  • Wang, Kai-Juan;Yang, Jun-Xia;Shi, Jia-Chen;Deng, Song-Yuan;Cao, Xiao-Qin;Song, Chun-Hua;Wang, Peng
    • Asian Pacific Journal of Cancer Prevention
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    • v.15 no.22
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    • pp.9859-9863
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    • 2014
  • Genetic epidemiological studies have shown that genetic susceptibility to esophageal cancer (EC) is an important cause of its high incidence within families in some areas of China. The purpose of this study was to obtain evidence of a genetic basis of EC in Xin-an and Xin-xiang counties in China. Familial aggregation and complex segregation analyses were performed of 79 EC families in these counties. The heritability of EC was examined using Falconer's method and complex segregation analysis was conducted with the SEGREG program in Statistical Analysis for Genetic Epidemiology (SAGE version 5.3.1). The results showed that the distribution of EC in families did not fit well into a binomial distribution. The heritability of EC among first-degree and second-degree relatives was $67.0{\pm}7.31%$ and $43.1%{\pm}9.80%$, respectively, and the summing up powered heritability was $53.2{\pm}6.74%$. The segregation ratio was 0.045. Complex segregation analysis showed that the genetic model of EC was additive. The current results provide evidence for an inherited propensity to EC in certain high-risk groups in China, and support efforts to identify the genes that confer susceptibility to this disease.

Genetic parameters for milk fatty acid composition of Holstein in Korea

  • Park, Chan Hyuk;Ranaraja, Umanthi;Dang, Chang Gwon;Kim, Jong Joo;Do, Chang Hee
    • Asian-Australasian Journal of Animal Sciences
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    • v.33 no.10
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    • pp.1573-1578
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    • 2020
  • Objective: Milk fatty acid (FA) is a main nutritional component that markedly effects human health. Intentional modification of the FA profile has the potential to improve milk quality. This study aimed at the factors affecting elevated FA levels and the estimation of the genetic parameters for milk FAs in the Korean Holstein population. Methods: Total 885,249 repeated test-day milk records including, milk yield, saturated fatty acids (SFA), polyunsaturated fatty acids (PUFA), monounsaturated fatty acids (MUFA), total unsaturated fatty acids (TUFA), fat and protein percentages were analyzed using CombiFoss FT+ system (Foss Analytical A/S, Denmark). Genetic parameters were estimated by the restricted maximum likelihood procedure based on the repeatability model using the Wombat program. Results: The FA profile varies along with the lactation and the energy balance (EB). With the negative EB in early lactation, mobilization of body fat reserves elevates the desirable FA levels. As a result of that, milk quality is increased by means of nutritionally and usability aspects during the early lactation. Moreover, heritability estimates for SFA, MUFA, PUFA, TUFA were 0.33, 0.42, 0.37, 0.41 respectively. According to the parity wise heritability analysis, first parity cows had relatively lower heritability for SFAs (0.19) than later parities (0.28). Conclusion: Genetic parameters indicated that FAs were under stronger genetic control. Therefore, we suggest implementing animal breeding programs towards improving the milk FA profile.

Estimates of Parameters for Genetic Relationship between Reproductive Performances and Body Condition Score of Hanwoo Cows

  • Choi, S.B.;Lee, J.W.;Choy, Y.H.;Na, K.J.;Kim, N.S.
    • Asian-Australasian Journal of Animal Sciences
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    • v.18 no.7
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    • pp.909-914
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    • 2005
  • This study was conducted to estimate phenotypic and genetic parameters of body condition score (BCS) and reproductive traits in Hanwoo cows. DFREML procedures were applied to obtain variance-covariance components and heritability estimates with single or two-trait models. Estimates of phenotypic correlations of BCS at service with BCS at calving was 0.16 and 0.26 with calving interval, 0.08 with gestation length, and 0.06 with number of services per conception, respectively. Estimates of phenotypic correlation of BCS at calving was 0.10 with calving interval, 0.13 with gestation length, and 0.10 with number of services per conception, respectively. Estimates of phenotypic correlation were low and negative, -0.11 between calving interval and gestation length and -0.13 between gestation length and number of services per conception. Estimates of direct genetic correlation were -0.06, between BCS at service and BCS at calving, 0.37 between BCS at service and BCS at weaning, and -0.18 between BCS at calving and BCS at weaning. Estimates of direct genetic correlation of days from calving to the 1st service were 0.17 with number of services per conception and -0.21 with BCS at service. Estimates of direct genetic correlation for BCS at calving were -0.02 with number of services per conception and -0.08 with BCS at service. Estimates of direct genetic correlation for BCS at weaning were 0.02 with number of services per conception and -0.07 with BCS at service. Estimates of direct heritability from single trait analyses were 0.13 for BCS at service, 0.20 for BCS at calving, 0.02 for BCS at weaning, and 0.20 for number of service per conception, respectively. Estimates of direct heritability were 0.20 for birth weight and 0.10 for weaning weight.

Heritability and Genetic Gain of Height in Populus davidiana in 4-year-old Clonal Test (4년생(年生) 우리나라 사시나무 클론의 수고유전력(樹高遺傳力) 및 개량효과(改良效果))

  • Noh, Eui Rae;Lee, Soung Kyu;Koo, Yeong Bon;Byun, Kwang Ok
    • Journal of Korean Society of Forest Science
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    • v.83 no.2
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    • pp.239-245
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    • 1994
  • The broad sense heritability of height of clonal means was estimated from 18 clones out of 25 clones growing at four different sites, and it showed considerably high heritability of $H^2_{CM}=0.883$. Therefore if we select the best one clone(5% selection), the genetic gain of 35.3% which is equal to 1.02m in height is expected to attain. If we select the best two clones(10% selection), the genetic gain will be 25.6% which is equal to 0.74m in height. Because the trees are only 4-year-old, it is expected to show higher genetic gain than the current gain when the trees reach to the age of final selection.

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Estimation of Genetic Correlations and Selection Responses for Carcass Traits between Ultrasound and Real Carcass Measurements in Hanwoo Cows

  • Son, Jihyun;Lee, Deukhwan
    • Journal of Animal Science and Technology
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    • v.55 no.6
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    • pp.501-508
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    • 2013
  • This study was conducted to determine genetic correlations among carcass traits measured by ultrasound and real carcass measurements and to estimate indirect selection responses for real carcass traits based on ultrasound measurements in Hanwoo cows. To accomplish this, 22,080 ultrasound measurement records from 17,926 cows collected from 2001 to 2012 and 11,907 carcass records obtained from fattened cattle from 2008 to 2012 were used. Genetic parameters were estimated based on eye muscle area (EMA), backfat thickness (BF) and marbling score (MS) measured by ultrasound-scanning of live cows and using the official technique on chilled bovine half-carcasses after slaughtering. Heritability and genetic correlation for carcass traits were estimated using a mixed model equation that consisted of environmental effects as fixed parameters and additive genetic effects and residual effects as random parameters, assuming that traits were different between ultrasound and carcass measurements. This statistical method was applied to the average information restricted maximum likelihood method. The heritability of EMA, BF and MS measured by ultrasound were 0.33, 0.61 and 0.46, respectively, while the heritability estimates of the corresponding traits based on carcass measurements were 0.29, 0.40 and 0.38, respectively and the genetic correlation between ultrasound and carcass traits for EMA, BF and MS were 0.41, 0.78 and 0.67, respectively. The genetic correlation between ultrasound and carcass traits was highly positive. Additionally, the selection response for marbling score was estimated to be 0.42 per generation if the cows were selected based on the ultrasound scan marbling score with an assumed selection intensity of 0.8. Overall, these results indicate that the ultrasound scan technique would be applicable to judging cow selection for genetically improved meat quality.

Estimation of genetic parameters for temperament in Jeju crossbred horses

  • Kim, Nam Young;Son, Jun Kyu;Cho, In Cheol;Shin, Sang Min;Park, Seol Hwa;Seong, Pil Nam;Woo, Jae Hoon;Park, Nam Geon;Park, Hee Bok
    • Asian-Australasian Journal of Animal Sciences
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    • v.31 no.8
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    • pp.1098-1102
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    • 2018
  • Objective: Temperament can be defined as a type of behavioral tendency that appears in a relatively stable manner in responses to various external stimuli over time. The aim of this study was to estimate genetic parameters for the records of temperament testing that are used to improve the temperament of Jeju crossbred (Jeju${\times}$Thoroughbred) horses. Methods: This study was conducted using 205 horses (101 females and 104 males) produced between 2010 and 2015. The experimental animals were imprinted and tamed according to the Manual for Horse Taming and Evaluation for Therapeutic Riding Horses and evaluated according to the categories for temperament testing (gentleness, patience, aggressiveness, sensitivity, and friendliness) between 15 months and 18 months of age. Each category was scored on a five-point linear scale. Genetic parameters for the test categories were analyzed using a multi-trait mixed model with repeated records. The ASReml program was used to analyze the data. Results: The heritability of gentleness, patience, aggressiveness, sensitivity and friendliness ranged from 0.08 to 0.53. The standard errors of estimated heritability ranged from 0.13 to 0.17. The test categories showed high genetic correlations with each other, ranging from 0.96 to 0.99 and high repeatability, ranging from 0.70 to 0.73. Conclusion: The results of this study showed that the test categories had moderate heritability and high genetic correlations, but additional studies may be necessary to use the results for the improvement programs of the temperament of Jeju crossbred horses.

Heritabilities of Facial Measurements and Their Latent Factors in Korean Families

  • Kim, Hyun-Jin;Im, Sun-Wha;Jargal, Ganchimeg;Lee, Siwoo;Yi, Jae-Hyuk;Park, Jeong-Yeon;Sung, Joohon;Cho, Sung-Il;Kim, Jong-Yeol;Kim, Jong-Il;Seo, Jeong-Sun
    • Genomics & Informatics
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    • v.11 no.2
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    • pp.83-92
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    • 2013
  • Genetic studies on facial morphology targeting healthy populations are fundamental in understanding the specific genetic influences involved; yet, most studies to date, if not all, have been focused on congenital diseases accompanied by facial anomalies. To study the specific genetic cues determining facial morphology, we estimated familial correlations and heritabilities of 14 facial measurements and 3 latent factors inferred from a factor analysis in a subset of the Korean population. The study included a total of 229 individuals from 38 families. We evaluated a total of 14 facial measurements using 2D digital photographs. We performed factor analysis to infer common latent variables. The heritabilities of 13 facial measurements were statistically significant (p < 0.05) and ranged from 0.25 to 0.61. Of these, the heritability of intercanthal width in the orbital region was found to be the highest ($h^2$ = 0.61, SE = 0.14). Three factors (lower face portion, orbital region, and vertical length) were obtained through factor analysis, where the heritability values ranged from 0.45 to 0.55. The heritability values for each factor were higher than the mean heritability value of individual original measurements. We have confirmed the genetic influence on facial anthropometric traits and suggest a potential way to categorize and analyze the facial portions into different groups.

Association between age at first calving, first lactation traits and lifetime productivity in Murrah buffaloes

  • Tamboli, P.;Bharadwaj, A.;Chaurasiya, A.;Bangar, Y. C.;Jerome, A.
    • Animal Bioscience
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    • v.35 no.8
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    • pp.1151-1161
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    • 2022
  • Objective: This study was conducted to estimate the association of age at first calving (AFC) with first lactation traits as well as lifetime performance traits in Murrah buffaloes. Methods: Data on first lactation and life time performance of Murrah buffaloes (n = 679), maintained at Indian Council of Agricultural Research-Central Institute for Research on Buffaloes, Hisar, India during the period 1983 through 2017, were deduced to calculate heritability estimates, genetic and phenotypic correlation of different first lactation and lifetime traits. The univariate animal model was fitted to estimate variance components and heritability separately for each trait, while bivariate animal models were set to estimate genetic and phenotypic correlations between traits under study. Results: The heritability was high for first peak milk yield (FPY, 0.64±0.08), moderate for AFC (0.48±0.07) and breeding efficiency (BE 0.39±0.09). High genetic correlations of first lactation total milk yield (FLTMY) with first lactation standard milk yield (FLSMY, 305 days or less), FPY, and first lactation length (FLL) was seen. Likewise, genetic correlation of AFC was positive with FLTMY, FLL, first dry period (FDP), first service period (FSP), first calving interval (FCI), herd life (HL) and productive days (PD). Significant phenotypic correlation of FLTMY was observed with HL, productive life (PL), PD, total lifetime milk yield (LTMY), standard lifetime milk yield (standard LTMY). Moreover, positive genetic and phenotypic correlation of FPY was observed with HL, PL, PD, total LTMY and standard LTMY. Conclusion: This study reports that AFC had positive genetic correlation with FDP, FSP, FCI, and unproductive days while, negative association of AFC was observed with FLSMY, PL, total LTMY, standard LTMY, and BE. This suggests that reduction of AFC would results in improvement of lifetime performance traits.

Estimation of genetic parameters for pork belly traits

  • Seung-Hoon Lee;Sang-Hoon Lee;Hee-Bok Park;Jun-Mo Kim
    • Animal Bioscience
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    • v.36 no.8
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    • pp.1156-1166
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    • 2023
  • Objective: Pork belly is a cut of meat with high worldwide demand. However, although the belly is comprised of multiple muscles and fat, unlike the loin muscle, research on their genetic parameters has yet to focus on a representative cut. To use swine breeding, it is necessary to estimate heritability against pork belly traits. Moreover, estimating genetic correlations is needed to identify genetic relationship among the traditional carcass and meat quality traits. This study sought to estimate the heritability of the carcass, belly, and their component traits, as well as the genetic correlations among them, to confirm whether these traits can be improved. Methods: A total of 543 Yorkshire pigs (406 castrated males and 137 females) from 49 sires and 244 dam were used in this study. To estimate genetic parameters, a total of 12 traits such as lean meat production ability, meat quality and pork belly traits were chosen. The heritabilities were estimated by using genome-wide efficient mixed model association software. The statistical model was selected so that farm, carcass weight, sex, and slaughter season were fixed effects. In addition, its genetic parameters were calculated via MTG2 software. Results: The heritability estimates for the 7th belly slice along the whole plate and its components were low to moderate (0.07±0.07 to 0.33±0.07). Moreover, the genetic correlations among the carcass and belly traits were moderate to high (0.28±0.20 to 0.99±0.31). Particularly, the rectus abdominis muscle exhibited a high absolute genetic correlation with the belly and meat quality (0.73±52 to 0.93±0.43). Conclusion: A moderate to high correlation coefficient was obtained based on the genetic parameters. The belly could be genetically improved to contain a larger proportion of muscle regardless of lean meat production ability.

Effect of Sex on Estimates of Genetic Parameters for Daily Gain and Ultrasonic Backfat Thickness in Swine

  • Hicks, C.;Satoh, M.;Ishii, K.;Kuroki, S.;Fujiwara, T.;Furukawa, T.
    • Asian-Australasian Journal of Animal Sciences
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    • v.12 no.5
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    • pp.677-681
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    • 1999
  • Estimates were made of genetic parameters for average daily gain (ADG) and average backfat thickness (ABF), and of the effect of sex on estimates of variance-covariance components for average daily gain of boars (DGM) and gilts (DGF) and average bacfat thickness of boars (BFM) and gilts (BFF) by residual maximum likelihood (REML) under a bivariate animal model. Data included a total of 2233 records (757 for boars and 1476 for gilts) of the Large White breed born between 1981 and 1986 in Miyazaki and Iwate prefectures in Japan. Heritability estimates for ADG and ABF were 0.43 and 0.69, respectively, with a genetic correlation of -0.08. Heritability estimates for DGM and DGF were 0.54 and 0.46, respectively, with a genetic correlation of 0.79, including that the two traits are influenced by similar but not identical genes. Respective estimates for BFM and BFF were 0.71 and 0.72 with a genetic correlation of 0.95, indicating that identical genes influence backfat thickness in boars and gilts.