• Title/Summary/Keyword: H.I.V.D.

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NMR study of the interaction of T$_4$ Endonuclease V with DNA

  • 이봉진;유준석;임형미;임후강
    • Proceedings of the Korean Society of Applied Pharmacology
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    • 1994.04a
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    • pp.267-267
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    • 1994
  • In order to obtain insight into the mechanism by which DNA containing a thymine photo-dimer is recognized by the excision repair enzyme, T$_4$ endonuclease V, we have taken NMR study of this protein and its complex with oligonucleotides. The conformations of five different DNA duplexes DNA I : d(GCGGATGGCG).d(CGCCTACCGC), DNA II d(GCGGTTGGCG) .d(CGCCAACCGC), DNA III : d(GCGGT ^ TGGCG) .d(CGCCAACCGC), DNA IV d(GCGGGCGGCG).d(CGCCCGCCGC) and DNA V d(GCGGCCGGCG) . d(CGCCGGCCGC) were studied by $^1$H NMR. The NMR spectra of these five DNA duplexes in the absence of the enzyme clearly show that the formation of a thymine dimer within the DNA induces only a minor distortion in the structure, and that the overall structure of B type DNA is retained. The photo-dimer formation is found to cause a large change in chemical shifts at the GC7 base pair, which is located at the 3'-side of the thymine dimer, accompanied by the major conformational change at the thymine dimer site. The binding of a mutant T$_4$ endonuclease V (E23Q), which is unable to digest DNA containing a thymine dimer, to the DNA duplex d(GCGGT ^ TGGCG)ㆍd(CGCCAACCGC) causes a large down-field shift in the imino proton resonance of GC7. Therefore, this position is thought to be either the crucial point of the interaction wi th T$_4$ endonuclease V, or the si to of a conformational change in the DNA caused by the binding of T$_4$ endonuclease V. Usually, it is very difficult to assign NMR peaks in DNA * protein complex because of severe peak overlaps. In order to overcome these peak overlaps, we used a method of deuterium incorporation.

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DYNAMICAL CHARACTERISTICS OF SUNSPOT CHROMOSPHERES II. ANALYSIS OF CA II H, K AND ${\lambda}8498$ LINES OF A SUNSPOT (SPO 5007) FOR OSCILLATORY MOTIONS

  • Yoon, Tae-Sam;Yun, Hong-Sik;Kim, Jeong-Hoon
    • Journal of The Korean Astronomical Society
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    • v.28 no.2
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    • pp.245-253
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    • 1995
  • We have analyzed the time series of Ca II H,K and ${\lambda}8498$ line profiles taken for a sunspot (SPO 5007) with the Echelle spectrograph attached to Vacuum Tower Telescope at Sacramento Peak Solar Observatory. Each set of spectra was taken simultaneously for 20 minutes at a time interval of 30 seconds. A total of 40 photographic films for each line was scanned by a PDS at Korea Astronomy Observatory. The central peak intensity of Ca II H ($I_{max}$), the intensity measured at ${\Delta}{\lambda}=-0.1{\AA}$ from the line center of ${\lambda}8498(I_{{\lambda}8489})$, the radial velocity ($V_r$) and the Doppler width (${\Delta}{\lambda}_D$) estimated from Ca II H have been measured to study the dynamical behaviors of the sunspot chromosphere. Fourier analysis has been carried out for these measured quantities. Our main results are as follows: (1) We have confirmed the 3-minute oscillation being dominant throughout the umbra. The period of oscillations jumps from 180 sec in the umbra to 500 to 1000 sec in the penumbra. (2) The nonlinear character of the umbral oscillation is noted from the observed sawtooth shaped radial velocity fluctuations with amplitudes reaching up to $5{\sim}6\;km/sec$. (3) The spatial distribution of the maximum powers shows that the power of oscillations is stronger in the umbra than in the penumbra. (4) The spatial distributions of the time averaged < $I_{max}$ > and < $V_r$ > across the spot are found to be nearly axially symmetric, implying that the physical quantities derived from the line profiles of Ca II H and ${\lambda}8498$ are inherently associated with the geometry of the magnetic field distribution of the spot. (5) The central peaks of the CaII H emission core lead the upward motions of the umbral atmosphere by $90^{\circ}$, while no phase delay is found in intensities between $I_{max}$ and $I_{{\lambda}8498}$, suggesting that the umbral oscillation is of standing waves.

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Effect of Surfactant Solution pH on Surfactant-Assisted Remediation (계면활성제를 이용한 오염복원에 있어서 계면 활성제 용액 pH의 효과)

  • Dal-Heui Lee;Rovert D. Cody
    • Economic and Environmental Geology
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    • v.34 no.3
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    • pp.301-306
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    • 2001
  • Column tests were conducted to investigate the optimal condition of surfactant solution pH that can affect the removal efficiency in surfactant-assisted remediation. Toluene and 1,2,4-trichlorobenzene were chosen as the model hydrophobic substances. Two Iowa soils, Fruitfield sand and Webster clay loam, were leached with solutions of 4%(v/v) sodium diphenyl oxide disulfonate (DOSL, trade name Dowfax 8390), or 4%(v/v) trideceth-19-carboxylic acid (TDCA, trade name Sandopan JA36), or 4% (v/v) octylphenoxypoly ethoxyethanol (OPEE, trade name Triton X100). The test results revealed that a maximum removal of toluene and 1,2,4-trichlorobenzene was obtained at pH 10 of surfactant solution, and maximum recoveries of added toluene (94%) or 1 ,2,4- trichlorobenzene (97 %) were obtained for DOSL surfactant solution in Fruitfield sandy soil column. Increased removal efficiency by pH control of both toluene and 1,2,4trichlorobenzene was 16% and 20% for DOSL with Fruitfild sandy soil, respectively. In addition, the maximum recoveries of added toluene or I ,2,4-trichlorobenzene were 89% and 93% for DOSL surfactant solution in Webster clay loam soil column. The maximum increase of toluene and 1,2,4-trichlorobenzene removal was 26% and 19% for DOSL with Webster clay loam soil, respectively. These experimental results indicate that maintaining a high pH surfactant solution in surfactant-assisted remediation is desirable for efficient removal of NAPLs from contminated soils.

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Performance Evaluation of a $SF_6$ Gas Circuit Breaker with Experimental Investigation (초고압 $SF_6$ 가스 차단기의 실험적 차단성능 평가)

  • Jeong, Y.W.;Park, H.T.;Oh, I.S.
    • Proceedings of the KIEE Conference
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    • 2005.11a
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    • pp.96-99
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    • 2005
  • In this study, we build system and techniques of evaluating the interruption performance of the GCB with experimental method. We constructed a simplified synthetic test circuit of which ability is up to 245kV, 50kA BTF test. And We composed a model test circuit breaker with puffer assisted self blasting type GCB. With this circuit breaker, we carried out the experiment of no load and SLF90. During the tests, we measured the several factors such as stroke, pressure, arc temperature, the voltage and current near the current zero and dI/dt, dV/dt. Arc conductivity before 200ns before current zero which is one of the indexes of the thermal recovery of a GCB was measured. With these kinds of measurement, we could estimate the performance of a GCB fundamentally. Futhermore these results were used to adjust the arc modeling with CFD(computational fluid dynamics) and we could increase the plausibility of the analytical method.

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Two Possible Space Groups of Ttis(tekaethylammonium) [bis(trimetaphosphate $\kappa^3O, O^', O^{"}$)] Vanadate(3-),$[V(P_3O_9)_2](NC_8H_{20})3$ (Tris(tetraethylammnnium) [bis(trimetaphosphate $\kappa^3O, O^', O^{"}$)] Vamdate(3-),$[V(P_3O_9)_2](NC_8H_{20})_3$,의 두가지 가능한 공간군)

  • 서일환;이진호
    • Korean Journal of Crystallography
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    • v.5 no.1
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    • pp.1-6
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    • 1994
  • Two possible space groups of the comfound, VP6N3018C24H:60, are: P 1, a=14.022(1), b=12.644(2), c= 12.640(1)A, a=8038(1), B=102.12(1), r=102.16(1), V=2124.1A3, Z=2, μ=0.47cm-1, d=1.46g/cm3, R=0.083 for 3350 independent reflections with Fo>4o IFI, and C2/c, a=19.32(2), b=16.32(2), c=14.02(1)A, B=105.98(5), β=105.98(5), V=4248.2A3, Z=4 R=0.083 for 1590 independent reflections with Fo>4c IFoI . In the space group P T, there are two monlecules in a unit cell. Vanadium atoms in the two monlecules occupy the two different special positions such that the complete monlecules are accomplished by the two independent center of symmetry. Therefore two different half molecules of bis(trimetaphosphate)vanadate and three molecules of tetraethylammonium are the asymmetric unit in a unit cell. In the space group C2/c, however, the vanadium atom is located at a special position with centrosymmetry, and a two-fold symmetry axis passes through C2/c, N2 and C25 atoms. Therefore the asymmrtic unit in a unit cell consists of a half molecule of bis(trimetaphosphate)vanadate and one and a half molecules of tetraethylammonium. All the molecular conformations in both space groups are very similar: six oxygen atoms coordinated to a vanadium atom in the bi s(trimetaphosphate)vanadate molecule form an octahedron and the four carbon atoms bonded to a nitrogen atom in the tetraethylammonium molecule are disordered so that the eight carbon atoms around nitrogen atom exhibit an irregular dodecahedral form.

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Reliability Assessment of Epoxy Bushing used for VCB rated 38kV (38kV VCB용 에폭시부싱 신뢰성평가)

  • Kim, M.K.;Huh, D.H.;Kim, I.S.
    • Proceedings of the KIEE Conference
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    • 2008.05a
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    • pp.133-134
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    • 2008
  • This paper describes a testing method to assess the reliability of the epoxy bushing used for the vacuum circuit breaker(VCB). Especially, in order to show the long-term durability of epoxy bushing in a short testing duration, the extremely accelerated electric stress applying test plan was adopted.

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Determination of meloxicam in human plasma by semi-micro high-performance liqiud chromatography.

  • Park, Chang-Hun;Kim, Ho-Hyun;Lee, Hee-Joo;Beom, Han-Sang
    • Proceedings of the PSK Conference
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    • 2003.04a
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    • pp.276.1-276.1
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    • 2003
  • This study describes a simple and sensitive semi-micro HPLC method with UV detection and direct deproteinization. The plasma protein was precipitated using perchloric acid (60%) and the supernatant was directly injected onto the semi-micro HPLC system. The separation was achieved on a C18 (25 mm ${\times}$ 2.0 mm I.D) analytical column with a mobile phase of sodium acetate buffer (pH 3.5, 50 mmol) - acetonitrile (60:40, V/V). (omitted)

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Novel Interface-engineered Junction Technology for Digital Circuit Applications

  • Yoshida, J.;Katsuno, H.;Inoue, S.;Nagano, T.
    • Progress in Superconductivity
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    • v.3 no.1
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    • pp.1-4
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    • 2001
  • Interface-engineered junctions with $YbBa_2$$Cu_3$$O_{7}$ as the counter electrode were demonstrated. The junctions exhibited excellent Josephson characteristics with a Josephson critical current ($I_{c}$) ranging from 0.1 mA to 8 mA and a magnetic field modulation of the $I_{c}$ exceeding 80% at 4.2 K while maintaining complete c-axis orientation of the counter-electrode layer. The$ 1\sigma$ spreads in $I_{c}$ for junctions with an average $I_{c}$ of 1-2 mA were 5-8% for 16 junctions within a chip, and 9.3% for a 100-junction array. Our dI/dV measurements suggest that a theoretical approach taking into account both a highly transparent barrier and the proximity effect is required to fully understand the Junction characteristics.ristics.

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Synthesis and structure analysis of the bis(dicyclohexylammonium) chromate dihydrate complex, [(C6H11)2NH2]2[CrO4]·2H2O

  • Kim, Chong-Hyeak;Moon, Hyoung-Sil;Lee, Sueg-Geun
    • Analytical Science and Technology
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    • v.20 no.5
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    • pp.448-451
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    • 2007
  • A new bis(dicyclohexylammonium) chromate dihydrate complex, $[(C_6H_{11})_2NH_2]_2[CrO_4]{\cdot}2H_2O$, (I), has been synthesized and its structure analyzed by FT-IR, EDS, elemental analysis, ICP-AES, and single crystal X-ray diffraction methods. The Cr(VI) complex (I) is tetragonal system, I${\bar{4}}$2d space group with a = 12.5196(1), b = 12.5196(1), c = $17.3796(3){\AA}$, a = ${\beta}$ = ${\gamma}$ = $90^{\circ}$, V = $2724.09(6){\AA}^3$, Z = 4. The crystal structure of complex (I) consists of tetrahedral chromate $[CrO_4]^{2-}$ anion, two organic dicyclohexylammonium $[(C_6H_{11})_2NH_2]^+$ cations and two lattice water molecules. The chromate anion and protonated dicyclohexylammonium cation is mainly constructed through the ionic bond. The cyclohexylammonium rings of the dicyclohexylammonium cation take the chair form and vertical configuration with each other. The N-H${\cdot}$O and O-H${\cdot}$O hydrogen bond networks between the $N_{dicyclohexylammonium}$, $O_{water}$ and $O_{chromate}$ atom lead to self-assembled molecular conformation and stabilize the crystal structure.