• Proceedings of the Korean Society of Crop Science Conference
• /
• 2022.10a
• /
• pp.202-202
• /
• 2022

Recently days, soybean production in paddy field is increasing, from 4,422 ha in 2016 to 10,658 ha in 2021 in Korea. It is easy for Phytophthora stem and root rot (PSR) occurring in paddy field condition, when it is poorly drained soils with a high clay content, and temporary flooding and ponding. Therefore PSR resistant soybean cultivar is required. The objective of this study is to identify QTL region and candidate genes relating to PSR resistance of the race in main soybean cultivation area in Korea. 210 soybean materials including cultivars and germplasm were used for inoculation and genome-wide association study (GWAS). Inoculation was conducted using stem-scar method with 2 replications in 2-year for the race 3053 from Kimje and 3617 from Andong. 210 materials were genotyped with Soya SNP 180K chip, and structure analysis and association mapping were conducted with QTLMAX V2. The results of inoculation showed that survival ratio ranged from 0% to 96.7% and mean 9.7% for 3053 and ranged from 0% to 100% and mean 7.6% for 3617. Structure analysis showed linkage disequillibrium (LD) was decayed below r²=0.5 at 335kb of SNP distance. Significant SNPs (LOD>7.0) were identified in Chr 1, 2, 3, 4, 5, 11, 14, 15 for 3053 and Chr 1, 2, 3, 7, 10, 14 for 3617. Especially, LD blocks (AX-90455181;15,056,628bp~AX-90475572;15,298,872bp) in Chr 2 for 3053 and 3067 were duplicated. 29 genes were identified on these genetic regions including Glyma.02gl47000 relating to ribosome recycling factor and defense response to fungus in Soybase.

• Proceedings of the Plant Resources Society of Korea Conference
• /
• 2020.08a
• /
• pp.42-42
• /
• 2020

오이(Cucumis sativa L.)는 1년생 초본의 덩굴성 박과 작물로 미숙한 과실을 다양한 식품 용도로 이용하고 있다. 오이는 시설재배기술 확립으로 연중 생산과 공급이 가능하나 내병성 품종개발이 필요한 실정이다. 또한 오이의 다양한 생리활성 물질에 대한 관심이 높아지고 있어 이를 위한 다양한 오이 자원이 필요한 실정이다. 본 연구에서는 국내외에서 수집한 오이 180자원의 형태적 특성을 분석하여 육종 소재로 활용하는데 있어 기초 정보를 제공하고자 하였다. 본 연구에서 사용된 오이 자원의 원산지는 조지아 98자원, 한국 37자원, 중국 28자원, 우즈베키스탄 17자원이었다. 오이 180자원은 모두 덩굴손을 가졌으며 자웅동주로 조사되었다. 착과습성은 주지형 83자원, 주지 및 측지형 97자원으로 조사되었고 절화당 자화수는 175자원이 2개로 조사되었으며 5자원은 1개로 조사되었다. 과형은 장원형 87자원, 단원형 92자원으로 대부분을 차지하였으며 과선단좁은형이 1자원 조사되었다. 과기부형태는 평평한 형태 83자원, 휘어진 형태 94자원으로 대부분이었으며 오목한 형태 1자원, 뽀족한 형태 2자원이 조사되었다. 과선단의 형태는 평평한 형태 148자원, 휘어지 형태 32자원으로 조사되었다. 오이 유전자원의 개화기는 60~80일로 평균 66.1일 이었으며 과실 성숙기는 33~68일로 평균 49.6일이었다. 국가별로 개화기는 62.4일(중국)~68.5일(한국), 과실성숙기는 48.3일(중국,조지아)~54.1일(우즈베키스탄)로 조사되었다. 본 실험에서 조사된 오이 유전자원의 형태적 특성은 오이 선발에 있어 기초 정보로 활용 가능할 것이며 추가적으로 농업형질, 내병성, 기능성 분석등의 오이 육종 프로그램을 위한 다양한 자원 평가 및 선발이 필요할 것이다.

• Proceedings of the Plant Resources Society of Korea Conference
• /
• 2020.08a
• /
• pp.41-41
• /
• 2020

가지(Solanum melongena L..)는 가지과 식물로 인도 동부가 원산지로 추정이 되며 우리나라를 포함해서 전세계적으로 널리 이용되고 있다. 가지는 다른 과채에 비해 비타민 함량은 낮으나 무기질과 폴리페놀, 식이섬유가 풍부하고 항균, 항암, 항산화활성을 가지는 것으로 보고되어 있다. 본 연구에서는 국내외에서 수집된 가지 유전자원의 형태적 특성을 조사하여 품종 육성을 위한 기초자료를 제공하고자 하였다. 본 연구에 사용된 가지 자원은 필리핀 78자원, 영국 78자원, 중국 45자원, 한국 12자원 등 16개 국가에서 수집된 459자원을 대상으로 하였다. 가지 유전자원의 생육 특성은 반직립형 437자원으로 가장 많았으며 직립형 15자원, 수평형 7자원으로 조사되었다. 하배축의 안토시아닌은 301자원이 있는 것으로 조사되었고 줄기 안토시아닌 축적은 258자원에서 조사되었다. 가시의 여부는 줄기에 31자원, 잎에 30자원이 조사되었으며 IT189682는 특이적으로 줄기에서만 가시가 조사되었다. 화색의 경우 흰색 31자원, 자주 207자원, 연자주 217자원, 흰자주 4자원으로 조사되었으며 꽃의 크기는 중간이 340자원으로 대부분을 차지했으며 큰 꽃 28자원, 작은 꽃 1자원(IT136568)으로 조사되었다. 과실의 형태는 원형 77자원, 타원형 27자원, 난형 31자원, 서양배형 57자원 곤봉형 88자원, 원통형 84자원, 긴원통형 95자원으로 다양하게 조사되었으며 과실 성숙색은 녹색 94자원, 흰색 16자원, 녹자주 67자원, 백자주 21자원, 자주 240자원, 주황 8자원, 노랑 13자원으로 조사되었다. 과실의 길이는 1.4(IT283605) ~ 40.5cm(K003875)로 평균 17.4cm였으며 두께는 0.7(IT283605) ~ 13.7cm(K162043)으로 평균 5.6cm 조사되었다. 본 실험에서 조사된 가지유전자원의 형태적 특성은 가지 선발에 있어 기초 정보로 활용 가능할 것이며 추가적으로 농업형질, 기능성 물질 분석등의 가지 육종 프로그램을 위한 다양한 평가 및 선발이 필요할 것이다.

• Proceedings of the Plant Resources Society of Korea Conference
• /
• 2020.08a
• /
• pp.40-40
• /
• 2020

들깨(Perilla frutescens L.)는 꿀풀과 1년생 초본으로 한국, 중국 등의 동부 아시아가 원산지로 식용, 약용 및 공업용 등 다양한 용도로 이용되고 있다 들깨는 우리나라에서 오랜시간 재배해 왔으나 체계적인 연구기간이 짧아, 다른 유료작물에 비해 육성품종이 적고 유전자원의 체계적인 수집평가가 이루어지지 않았다. 특히 외국에서는 들깨와 근연종을 이용하여 색소 및 정유성분에 대한 연구를 하는데 비해 우리나라에서는 주로 식용으로만 연구가 진행되고 있다. 들깨 육종에 있어서 중요한 것은 유전자원 확보와 이를 정리 보존하여 우량한 육종재료를 효율적으로 이용하는 것이다. 본 연구에서는 국내에서 수집한 들깨 44자원의 형태적 특성을 조사하여 품종 육성을 위한 기초자료를 제공하고자 하였다. 본 연구에 사용된 들깨 자원은 경북 수집 10자원으로 가장 많았으며 전북 8자원, 경남 7자원, 강원과 경기에서 각각 6자원, 충남 3자원, 전남과 충북에서 각각 2자원이었다. 화색은 들깨 44자원 모두 흰색이었으며 줄기색은 연녹색이 29자원, 녹색 9자원, 자주색 4자원으로 조사되었다. 잎의 앞면은 녹색 27자원, 연녹색 10자원, 진녹색 7자원이었으며 뒷면색은 녹색 26자원, 연녹색 18자원으로 조사되었다. 잎의 모양은 장타원형 21자원, 피침형 15자원, 심장형 7자원이었으며 잎의 모용은 23자원이 적음, 14자원이 보통, 6자원이 많게 조사되었다. 잎의 길이는 35자원이 15.1cm이상으로 조사되었고 잎넓이는 11.1cm이상인 자원이 37자원으로 조사되었다. 종피색은 갈색이 28자원, 회색이 6자원, 암갈색이 3자원 순으로 조사되었다. 본 실험에서 조사된 들깨 유전자원의 형태적 특성은 들깨 선발에 있어 기초 정보로 활용 가능할 것이며 추가적으로 농업형질, 기능성 물질 분석등의 들깨 육종 프로그램을 위한 다양한 평가 및 선발이 필요할 것이다.

• KOREAN JOURNAL OF CROP SCIENCE
• /
• v.68 no.3
• /
• pp.147-166
• /
• 2023

Seed color is controlled by several genes and is a key trait in determining the metabolite content and biological activities of legume genotypes. In this study, 296 adzuki bean accessions, including 159 grey, 99 red, and 38 white adzuki beans, were grown in Korea. Variations in total phenolic content (TPC), total saponin content (TSC), DPPH^• scavenging activity, ABTS^•+ scavenging activity, and ferric reducing antioxidant power (FRAP) were assessed and were reported to be in the ranges of 1.52-8.24 mg GAE/g, 14.36-114.22 mg DE/g, 0.23-12.84 mg AAE/g, 1.05-17.66 mg TE/g, and 0.59-13.14 mg AAE/g, respectively, with a wide variation across adzuki beans. Except for DPPH^• scavenging activity, the average values declined in the order gray > red > white adzuki beans, each demonstrating a significant variation (p < 0.05). White adzuki beans, which showed low metabolite content and antioxidant activity, were clearly separated from the gray and red genotypes using principal component and hierarchical cluster analyses. Moreover, TPC, TSC, and antioxidant activities were strongly correlated, regardless of seed color. Overall, the diversity of the TPC, TSC, and antioxidant activity in a broad population of adzuki bean genotypes was determined. Furthermore, this study found that seed color variation in adzuki beans had a significant effect on the metabolite content and antioxidant activity. Superior accessions with high levels of TPC, TSC, and antioxidant activity were also discovered and could be used for functional plant breeding and human consumption. The findings of this study may be useful for understanding the relationship between seed coat color and metabolite concentration in adzuki beans, paving the way for molecular-level analyses.

• Korean Journal of Soil Science and Fertilizer
• /
• v.46 no.6
• /
• pp.615-622
• /
• 2013

The purpose of this study was to evaluate microbial contamination of melons in Korea. A total of 123 samples including melon fruits, leaves, seeds, soils, and irrigation water were collected from farms and markets to detect total aerobic bacteria, coliform, Escherichia coli, and pathogenic bacteria such as Bacillus cereus, Listeria monocytogenes, Salmonella spp., and Staphylococcus aureus. Samples were collected from Iksan and Nonsan farms to monitor bacterial levels on pre-market melons. The total aerobic and coliform bacteria on melon cultivation were between 0.43 and 6.65 log CFU $g^{-1}$, and 0.67 and 2.91 log CFU $g^{-1}$, respectively. Bacillus cereus, a fecal coliform, was detected in soils and melon leaves from Iksan farm at 2.95, 0.73 log CFU $g^{-1}$, respectively, and in soils from Nonsan farm at 3.16 log CFU $g^{-1}$. Market melon samples were collected to assay bacterial load on melon being sold to consumers. The contamination levels of total aerobic bacteria in agricultural markets, big-box retailers, and traditional markets were 4.82, 3.94, 3.99 log CFU $g^{-1}$, respectively. The numbers of coliform in melon on the markets ranged from 0.09 to 0.49 log CFU $g^{-1}$. Listeria monocytogenes, Salmonella spp., and Staphylococcus aureus were not detected in any samples. The count of total aerobic bacteria on melon seeds ranged from 0.33 to 3.34 log CFU $g^{-1}$. This study found that irrigation water, soil, manure and various farm work activities including post-harvest processes were latent sources of microbial contamination. These results suggest that hygienic management and monitoring of soil, water, and agricultural material should be performed to reduce microbial contamination in melon production.

• KOREAN JOURNAL OF CROP SCIENCE
• /
• v.58 no.4
• /
• pp.376-382
• /
• 2013

Rice sheath blight (ShB), caused by Rhizoctonia solani K$\ddot{u}$hn, is one of the serious fungal disease resulting in severe yield loss in rice field worldwide. There are limited sources of genetic resistance and no commercial cultivar with high level of ShB resistance is currently available in Korea. In order to seek available resources with high level of resistance to ShB, 40 rice germplasms were used to evaluate disease reactions including ShB, leaf blast and bacterial leaf blight and these germplasms also examined agronomic traits such as days to heading, culm length, panicle length, No. of panicles, No. of spikelets per panicle and so on. There is wide variation in agronomic characters and disease reactions. Rice germplasms also showed considerably different ShB reaction caused by inoculation at seedling stage. Areumbyeo, Gayabyeo, IR579-Es44 and IR64 showed more strong reaction to ShB than the others. Especially, Gayabyeo is considerably available to develop a new variety with resistance to ShB in Korea.

• Journal of Life Science
• /
• v.22 no.7
• /
• pp.871-879
• /
• 2012

Polyploids are a potentially important germplasm source in seedless citrus breeding program. Seedlessness is one of the most promising traits of commercial mandarin breeds that mandarin triploid hybrids possess permanently. The formation of new constant triploid hybrids can be recovered through diploid species hybridization from the fusion of divalent gametes at low frequencyor intra-and inter-ploidy crosses. However, extensive breeding work based on small $F_1$ hybrid seeds developed is impossible without a very effective aseptic methodology and ploidy event. In this study, in vitro embryo culture was employed to recover natural hybrids from monoembryonic diploid, open-pollinated mandarin. Flow cytometry was used to determine ploidy level. A total of 10,289 seeds were extracted from 792 fruits having approximately 13 seeds per fruit. Average frequency of small seeds developed was 7.1%, while the average frequency of small seeds per fruit were: 8.9% for 'Clementine' 10.2% for 'Harehime' 2.6% for 'Kamja' 3.1% for 'Pyunkyool' 2.8% for 'Sadookam' and 7.0% for 'Wilking' mandarin. Average size of a perfect seed was $49.52{\pm}0.07mm^2$ ('Clementine') while the small seed measured $7.95{\pm}0.04mm^2$ ('Clementine'), which was about 1/6 smaller than the perfect seed. In total, 731 small seeds were obtained and all of them contained only one embryo per seed. The efficiency of 'Clementine' was 14 times higher than 'Wilking' and more than 109 times higher than 'Pyunkyool'. The basic information on spontaneous polyploidy provides for the hybridization of constant triploids and increases the efficiency of conventional cross.

• Korean Journal of Environmental Agriculture
• /
• v.36 no.3
• /
• pp.175-183
• /
• 2017

BACKGROUND:The Aromatic rice which is characterized by the flavor of Nurungji when cooked rice, and consumption is increasing recently. The purpose of this study was to investigate the physicochemical characteristics and aroma components of five aromatic rice cultivars according to transplanting time. METHODS AND RESULTS: Quantitative analysis of protein, fat, fatty acid and essential amino acid for five aroma rice cultivars(Hyangmibyeo 2 ho, Aromi, Mihyang, Aranghyangchal, Heughyang)and transplanting time was analyzed by crude protein analyzer, gas chromatography (GC), liquid chromatography (LC) and viscosity analysis was done by using rapid viscosity analyzer (RVA). The content of 2-acetyl-1-pyrroline (2AP) was determined by gas chromatography mass spectrometer. (GC-MS) As a result, the average protein and lipid contents were 6.5% and 2.4%, respectively. The content of essential amino acid showed the highest content at 104.4mg/g. There was no significant change in normal nutrients during the transplanting time. By RVA, cv.Hyangmibyeo 2 ho showed the highest peak and total setback viscosities and lowest breakdown viscosity in early transplantation. The content of 2AP in flavor varieties and transplanting time was quantitatively analyzed by GC-MS. Among the cultivars, Aromi showed the highest 2AP contents at $66.7{\mu}g/100gin$ normal transplanting time. CONCLUSION: cv.Aromi and Hyangmibyeo 2 ho were excellent physicochemical properties and 2AP components contents amongaromatic rice cultivars tested. Theiroptimaltime to transplant was at the beginning of June in the area of Miryang.

• Korean Journal of Environmental Agriculture
• /
• v.33 no.4
• /
• pp.327-333
• /
• 2014

BACKGROUND: Rabbiteye blueberry(Vaccinium ashei) is one of the most widely grown blueberry types in the world, together with Northern and Southern highbush blueberry(Vaccinium corymbosum). Rabbiteye blueberry have higher soil adaptability and fruit productivity but less cold tolerance to low temperature than highbush blueberry. The objective of this study is to investigate freezing tolerance of floral buds and establish a cultivation zone for rabbiteye blueberry cultivars. METHODS AND RESULTS: Bearing branches which have similar thickness and same number of floral buds were collected in the early January at the blueberry germplasm preservation plot located in Namhae Sub-station, National Institute of Horticultural and Herbal Science in Gyeongsangnamdo. Cold response of bearing branches were investigated by electrolyte leakage and freezing tolerance of floral buds were determined by ovary browning ratio of 50%($LT_{50}$). Cultivation zone was established based on mean annual extreme minimum temperature for 30 years, from 1981 to 2010. The electrolyte leakage of bearing branches in rabbiteye blueberry increased as temperature decreased and was lowest in 'Brightwell' but highest in 'Bluegem' when they were kept in $-5^{\circ}C$. Besides, the electrolyte leakage increased in 'Brightblue', 'Brightwell', 'Climax', 'Delite', 'Gardenblue', 'Southland' and 'Woodard' in $-20^{\circ}C$. Freezing tolerance($LT_{50}$) was lowest in 'Bluegem' and 'Homebell'($-13.3^{\circ}C$), and highest in 'Tifblue'($-25^{\circ}C$) among different rabbiteye blueberry cultivars. $LT_{50}$ of 'Southland' was from -15.0 to $-16.7^{\circ}C$, that of 'Delite', 'Brightwell',' Austin' and 'Climax' was $-18.3^{\circ}C$, and that of 'Bluebelle', 'Woodard' and 'Powderblue' was $-20^{\circ}C$. CONCLUSION: This study indicate that The hardiness zones of rabbiteye blueberry were classified into Six cultivation zones and cultivation zones of most cultivars were the south of Jeollanam-do and Gyeongdangnam-do, except for 'Tifblue.'