• BMB Reports
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• v.44 no.2
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• pp.118-122
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• 2011

Most widely used secondary structure assignment methods such as DSSP identify structural elements based on N-H and C=O hydrogen bonding patterns from X-ray or NMR-determined coordinates. Secondary structure assignment algorithms using limited $C{\alpha}$ information have been under development as well, but their accuracy is only ~80% compared to DSSP. We have hereby developed SABA (Secondary Structure Assignment Program Based on only Alpha Carbons) with ~90% accuracy. SABA defines a novel geometrical parameter, termed a pseudo center, which is the midpoint of two continuous $C{\alpha}s$. SABA is capable of identifying $\alpha$-helices, $3_{10}$-helices, and $\beta$-strands with high accuracy by using cut-off criteria on distances and dihedral angles between two or more pseudo centers. In addition to assigning secondary structures to $C{\alpha}$-only structures, algorithms using limited $C{\alpha}$ information with high accuracy have the potential to enhance the speed of calculations for high capacity structure comparison.

• Wind and Structures
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• v.26 no.6
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• pp.355-367
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• 2018

This paper studies the aerodynamic stability of a tensioned, geometrically nonlinear orthotropic membrane structure with hyperbolic paraboloid in sag direction. Considering flow separation, the wind field around membrane structure is simulated as the superposition of a uniform flow and a continuous vortex layer. By the potential flow theory in fluid mechanics and the thin airfoil theory in aerodynamics, aerodynamic pressure acting on membrane surface can be determined. And based on the large amplitude theory of membrane and D'Alembert's principle, interaction governing equations of wind-structure are established. Then, under the circumstance of single-mode response, the Bubnov-Galerkin approximate method is applied to transform the complicated interaction governing equations into a system of second-order nonlinear differential equation with constant coefficients. Through judging the frequency characteristic of the system characteristic equation, the critical velocity of divergence instability is determined. Different parameter analysis shows that the orthotropy, geometrical nonlinearity and scantling of structure is significant for preventing destructive aerodynamic instability in membrane structures. Compared to the model without considering flow separation, it's basically consistent about the divergence instability regularities in the flow separation model.

• Proceedings of the IEEK Conference
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• 2003.11a
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• pp.301-304
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• 2003

This raper propose a matching algorithm using voronoi diagram for rotation and translation invariant fingerprint identification. The proposed algorithm extracts geometrical structures that ate derived from voronoi diagram of a fingerprint image. Then distances and angles are extracted from the geometrical structure and saved indexing form for fingerprint matching. Experimental results show that the proposed algorithm invariant to fingerprint rotation and translation requirements and matching time.

• Publications of The Korean Astronomical Society
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• v.20 no.1 s.24
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• pp.43-48
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• 2005

We present a high resolution spectrum of PU Vul observed at Bohyunsan Optical Astronomy Observatory (BOAO) on April 9, 2004. Permitted emission and nebular lines of PU Vul had been significantly changed compared to all spectra observed since its eruption in 1979. Therefore all new lines should be re-identified and were done so. We do-convoluted a $H{\beta}$ line into several emission components with Gaussian functions. Then we carefully discussed the geometrical feature of PU Vul in April 2004.

• Bulletin of the Korean Chemical Society
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• v.29 no.11
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• pp.2295-2298
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• 2008

• Proceedings of the Korea Society for Simulation Conference
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• 1999.10a
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• pp.24-29
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• 1999

Proposed in this paper is a modeling and simulation methodology for a virtual manufacturing environment. Based on DEVS formalism[Zeigler 76], the proposed model, so called GKDEVS, is designed to descript the geometrical knematic structure as well as event-driven and continuous state dynamics. In terms of abstract simulation algorithm[Zeigler 84], the simulation method of GKDEVS is proposed for combined discrete-continuous simulation. Using the GKDEVS, and FMS model consisting of a turing machine, a 3-axis machine and a RGV-mounted robot is constructed and simulated.

• Publications of The Korean Astronomical Society
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• v.21 no.2
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• pp.35-42
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• 2006

We report a high resolution spectrum of AG Pegasi observed at Bohyunsan Optical Astronomy Observatory (BOAO) on October 2, 2004. Some of permitted emission lines, for example H I, He I, He II, Fe II and Ti II were observed in the spectrum of AG Pegasi in 2004. Lines presented in the longer wavelength region than $6500{\AA}$ are identified. And radial velocities for each element are measured. Then we carefully discuss the geometrical feature of AG Pegasi in October 2004.

• Proceedings of the Korean Society For Composite Materials Conference
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• 1999.11a
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• pp.272-276
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• 1999

The present paper proposes design and manufacturing methods of the carbon/epoxy square grid structure with near zero-CTE in three geometrical principal directions. Bonding strength of the grid structure is examined for different bonding methods. Numerical examples show that maximum displacement of the composite grid structure is almost zero comparing with that of aluminum grid structure with same dimension under thermal loading.

• Advances in aircraft and spacecraft science
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• v.3 no.4
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• pp.503-521
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• 2016

Variances in turbomachinery blades caused by manufacturing, operation or regeneration can result in modified structural behavior. In this work, the scatter of geometrical and material properties of a turbine blade and its influence on structure performance is discussed. In particular, the vibration characteristics and the lifetime of a turbine blade are evaluated. Geometrical variances of the surface of the blades are described using the principal component analysis. The scatter in material properties is considered by 16 varying material parameters. Maximum vibration amplitudes and the number of load cycles the turbine blade can withstand are analyzed by finite element simulations incorporating probabilistic principles. The probabilistic simulations demonstrate that both geometrical and material variances have a significant influence on the scatter of vibration amplitude and lifetime. Dependencies are quantified and correlations between varied input parameters and the structural performance of the blade are detected.

• Transactions of the Korean Society of Mechanical Engineers A
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• v.29 no.7 s.238
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• pp.990-997
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• 2005

The objective of this paper is to present the element connectivity parameterization (ECP) fur three dimensional problems. In the ECP method, a continuum structure is viewed as discretized finite elements connected by zero-length elastic links whose stiffness values control the degree of inter-element connectivity. The ECP method can effectively avoid the formation of the low-density unstable elements. These elements appear when the standard element density method is used for geometrical nonlinear problems. In this paper, this ECP method developed fur two-dimensional problems is expanded to the design of three-dimensional geometrical nonlinear structures. Among others, the automatic procedure converting standard finite element models to the models suitable for the ECP approach is developed and applied for optimization problems defined on general three-dimensional design domains.