• Title/Summary/Keyword: Genus Sorbus

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Phylogenetic Study of Genus Sorbus in Korea by Internal Transcribed Spacer Sequence (ITS) (ITS에 의한 한국내 마가목 속 분류군의 유전적 계통분류학적 연구)

  • Huh, Man-Kyu;Kim, Sea-Hyun;Park, So-Hye
    • Journal of Life Science
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    • v.17 no.12
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    • pp.1610-1615
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    • 2007
  • Genus Sorbus is a long lived woody species that is primarily distributed throughout Asia and Europe. This species is regarded as very important herbal medicines in Korea and China. Sorbus commixta is primarily distributed throughout Europe. We evaluated a representative sample of the four taxa with nuclear ribosomal DNA internal transcribed spacer sequences (ITS) to estimate genetic relationships within genus. Aligned nucleotide sequences of the length of ITS1 were nearly constant within genus Sorbus varying from 219 in S. aucuparia to 218 in the rest species. Especially, the 5.8S subunit of all taxa of Sorbus was found to constant of 165 bp nucleotides. However, aligned nucleotide sequences of the length of ITS2 vary from 240 in S. sambucifolia var. pseudogrcilisto 245 in S. aucuparia. Total alignment length is 629 positions, of which 35 are parsimony-informative, 32 variable but parsimony-uninformative, and 552 constant characters. The base furtherance showed the difference to the by a total taxon: an average A and T are 17.7% and G and C are 30.4%, 34.2%, respectively. All the four taxa beginning with conserved base paired triplets emerging from single strand regions (domain I). Noteworthy, in the RNA secondary structure proposed for the three Korean Sorbus taxa RNA transcript ITS2, which shows a remarkedly well-conserved folding (domain II). When compared to the European Sorbus (S. aucuparia) of ITS2. ITS analysis may be useful in germ-plasm classification several taxa of genus Sorbus.

Study of Genetic Diversity and Taxonomy of Genus Sorbus in Korea Using Random Amplified Polymorphic DNA (RAPD에 의한 한국내 마가목속 식물의 유전적 다양성과 분류학적 연구)

  • Park, So-Hye;Kim, Sea-Hyun;Seo, Hee-Won;Huh, Man-Kyu
    • Journal of Life Science
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    • v.17 no.4 s.84
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    • pp.470-475
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    • 2007
  • Genus Sorbus is a long lived woody species. Plants of this genus are primarily distributed patchy throughout Asia and Europe. Sorbus commixta is primarily distributed throughout Europe. Eastern Asian Sorbus species are regarded as very important herbal medicines in Korea and China. Random amplified polymorphic DNA (RAPD) was used to investigate the genetic variation and phylogenetic analysis of four species of this genus in Korea. Although some Korean populations of these species were isolated and patchily distributed, they exhibited a high level of genetic diversity. Twenty-six primers revealed 205 loci, of which 128 were polymorphic (62.4%). S. commixta showed the highest diversity (0.165), whereas S. aucuparia showed the lowest diversity (0.109). The estimated gene flow (Nm) was low high among intra-species (mean Nm=0.755). A similarity matrix based on the proportion of shared fragments (GS) was used to evaluate relatedness among species. The estimate of GS ranged from 0.786 to 0.963. The molecular data allowed us to resolve well-supported clades in Korean taxa and European species. An addition, especially, species-specific markers for genus Sorbus by RAPD analysis may be useful in germ-plasm classification and agricultural process of several taxa of this genus.

The Flora of Habitats Distributed with Allium victorialis var. platyphyllum Populations in the South Korea (우리나라 산마늘 개체군 자생지의 식물상)

  • Kim, Hye-Jin;Doh, Eun-Soo;Chang, Jun-Pok;Choi, Myung-Suk;Yang, Jae-Kyung;Cho, Hyun-Je;Bae, Kwan-Ho;Shin, Hak-Sub;Park, Hee-Kwon;Lee, Seo-Hui;Yun, Chung-Weon
    • Korean Journal of Environment and Ecology
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    • v.25 no.3
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    • pp.284-294
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    • 2011
  • This study was conducted to investigate the flora of habitats distributed with Allium victorialis var. platyphyllum populations in the South Korea. The vascular plants were surveyed 4 times from March 2009 to June 2010. The flora of studied area was listed as 214 taxa; 64 families, 142 genus, 181 species, 2 subspecies, 30 varieties, 1 forma. According to the specific plant species by classes, class I has 17 taxa; 15 families, 16 genus, 15 species, 2 varieties. Class II has 16 taxa; 13 families, 16 genus, 15 species, 2 varieties. Class III has 20 taxa; 16 families, 19 genus, 18 species, 2 varieties. Class III has 20 taxa; 16 families, 19 genus, 18 species, 2 varieties. Class IV has 23 taxa; 20 families, 23 genus, 19 species, 4 varieties. Class V has 2 taxa; 2 families, 2 genus, 2 species. Rare plant was 12 taxa; 9 families, 11 genus, 10 species, 2 varieties. Endemic plant was 21 taxa; 17 families, 19 genus, 18 species, 3 varieties. Endangered plant was not present in study area. It was considered that the ecosystem was probably stabilized for nothing of naturalized species and ecosystem disturbance species there. The characteristics of growth environments in the habitats with Allium victorialis var. platyphyllum were considered to be related to valley species and subalpine species such as Actinidia polygama, Cornus controversa, Rhododendron brachycarpum and Sorbus commixta.

Ecological Changes in Pine Gall Midge-damaged Pinus densiflora Forest at the Southern Temperate Forest Zone in Korea(IV) - Analysis of Phytosociological Changes during Seven Years of the Korean Red Pine Community in Gwangju-Gun - (솔잎혹파리 피해적송림(被害赤松林)의 생태학적(生態學的) 연구(硏究)(IV) - 광주군(廣州郡) 소나무군집(群集)의 7년간(年間)의 식생변화분석(植生變化分析) -)

  • Lee, Kyong Jae;Jo, Jae Chang;Ryu, Chang Hee;Song, Keun Joon
    • Journal of Korean Society of Forest Science
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    • v.79 no.1
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    • pp.21-25
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    • 1990
  • To investigate and analyze the change of the vegetation community structure between the severely damaged time (in 1980) and the restored time (in 1987) by the pine gall midge. Thecodoplosis japonensis, four plots with five subplots were sampled at Gwangju-gun of Kyongki-do. The total number of woody species per $500m^2$ changed 39 in 1980 to 41 in 1987. According to the damage restoring, the importance value of the genus Quercus as substituting in the severely damaged forest showed a slight decrease but the importance value of Carpinus laxiflora, Sorbus alnifolia and Styrax obassia increased. As to changes of the vegetation community structure for seven years, the diversity of vegetation structure has increased. The similarity indices between 1980 and 1987 were 52.9% and 51.9% in the understory and shrub stratum, respectively.

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