• Title/Summary/Keyword: Genetic basis

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A genetic approach to comprehend the complex and dynamic event of floral development: a review

  • Jatindra Nath Mohanty;Swayamprabha Sahoo;Puspanjali Mishra
    • Genomics & Informatics
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    • v.20 no.4
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    • pp.40.1-40.8
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    • 2022
  • The concepts of phylogeny and floral genetics play a crucial role in understanding the origin and diversification of flowers in angiosperms. Angiosperms evolved a great diversity of ways to display their flowers for reproductive success with variations in floral color, size, shape, scent, arrangements, and flowering time. The various innovations in floral forms and the aggregation of flowers into different kinds of inflorescences have driven new ecological adaptations, speciation, and angiosperm diversification. Evolutionary developmental biology seeks to uncover the developmental and genetic basis underlying morphological diversification. Advances in the developmental genetics of floral display have provided a foundation for insights into the genetic basis of floral and inflorescence evolution. A number of regulatory genes controlling floral and inflorescence development have been identified in model plants such as Arabidopsis thaliana and Antirrhinum majus using forward genetics, and conserved functions of many of these genes across diverse non-model species have been revealed by reverse genetics. Transcription factors are vital elements in systems that play crucial roles in linked gene expression in the evolution and development of flowers. Therefore, we review the sex-linked genes, mostly transcription factors, associated with the complex and dynamic event of floral development and briefly discuss the sex-linked genes that have been characterized through next-generation sequencing.

Effect of Discrete Walsh Transform in Metamodel-assisted Genetic Algorithms (이산 월시 변환이 메타모델을 사용한 유전 알고리즘에 미치는 영향)

  • Yu, Dong-Pil;Kim, Yong-Hyuk
    • Journal of the Korea Convergence Society
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    • v.10 no.12
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    • pp.29-34
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    • 2019
  • If it takes much time to calculate the fitness of the solution in genetic algorithms, it is essential to create a metamodel. Much research has been completed to improve the performance of metamodels. In this study, we tried to get a better performance of metamotel using discrete Walsh transform in discrete domain. We transforms the basis of the solution and creates a metamodel using the transformed solution. We experimented with NK-landscape, a representative function of the pseudo-boolean function, and provided empirical evidence on the performance of the proposed model. When we performed the genetic algorithm using the proposed model, we confirmed that the genetic algorithm found a better solution. In particular, our metamodel showed better performance than that using the radial basis function network that modified the similarity function for the discrete domain.

The Nurses′ Knowledge and Perception of Their Role in Genetics

  • Kim, Mi-Young
    • Journal of Korean Academy of Nursing
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    • v.33 no.8
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    • pp.1083-1092
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    • 2003
  • Purpose. The purpose of the study was to assess the level of nurses' genetic knowledge and the perception of nurses' role in genetics. The ultimate goal of this paper is to educate practicing nurses so that they can counsel individuals and families with genetic problems, on the basis of better understanding of genetic diseases. Methods. A total of 969 clinical nurses in 11 general hospitals completed a self-administered questionnaire including basic genetic knowledge and perception of their role. The instruments were made by the author with the help of some experts on genetics. T-test, ANOVA, and Pearson Correlation were used to analyze the data. Results. The results of this study indicated that nurses revealed a vast knowledge deficit in genetics and the need for genetic content in nursing curriculum. The results also showed that nurses' sources of information about genetics largely came from the mass media. The nurses also expressed great interest in educating and counseling patients. Overall, the survey found a positive correlation between the nurses' level of knowledge and their degree of interest in genetics. Conclusion. In conclusion, education and training of clinical nurses in genetics is critical in integrating genetics with nursing science. Therefore, the development of educational programs for nursing knowledge and counseling as well as basic curriculums in genetic nursing at universities are essential in the near future.

Screening of Genetic Variations in Korean Native Duck using Next-Generation Resequencing Data

  • Eunjin Cho;Minjun Kim;Hyo Jun Choo;Jun Heon Lee
    • Korean Journal of Poultry Science
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    • v.50 no.3
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    • pp.187-191
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    • 2023
  • Korean native ducks (KNDs) continue to have a high preference from consumers due to their excellent meat quality and taste characteristics. However, due to low productivity and fixed plumage color phenotype, it could not secure a large share in the domestic market compared to imported species. In order to improve the market share of KNDs, the genetic characteristics of the breed should be identified and used for improvement and selection. Therefore, this study was conducted to identify the genetic information of colored and white KNDs using next-generation resequencing data and screening for differences between the two groups. As a result of the analysis, the genetic variants that showed significant differences between the colored and white KND groups were mainly identified as mutations related to tyrosine activity. The variants were located in the genes that affect melanin synthesis and regulation, such as EGFR, PDGFRA, and DDR2, and these were reported as the candidate genes related to plumage pigmentation in poultry. Therefore, the results of this study are expected to be useful as a basis for understanding and utilizing the genetic characteristics of KNDs for genetic improvement and selection of white broiler KNDs.

Initial Optimization of the RBFN with Time-Frequency Localization Using Genetic Algorithm (유전 알고리즘과 시간-주파수 지역화를 이용한 방사 기준 함수망의 초기 최적화)

  • 김성주;서재용;김용택;조현찬;전홍태
    • Proceedings of the Korean Institute of Intelligent Systems Conference
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    • 2001.12a
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    • pp.221-224
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    • 2001
  • In this paper, we propose the initial optimized structure of the Radial Basis Function Network which is more simple in the part on the structure and converges more faster than Neural Network with the analysis method using Time-Frequency Localization and genetic algorithm. When we construct the hidden node with the Radial Basis Function whose localization is similar with an approximation target function in the plane of the Time and Frequency, we have initial structure of RBFN, After that, we evaluate the parameters of RBF in the network and the parameters needed for the network is more a few. Finally, we make a good decision of the initial structure having an ability of approximation.

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Optimization for the Initial Designed Structure by Localization Using Genetic Algorithm

  • Kim, Seong-Joo;Kim, Yong-Taek;Ko, Jae-Yang;Jeon, Hong-Tae
    • Proceedings of the IEEK Conference
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    • 2002.07c
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    • pp.1650-1653
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    • 2002
  • In this paper, we propose the initial optimized structure of the Radial Basis function Networks that is simple in the part of the structure and fast converges more than neural networks with the analysis method using Time- Frequency Localization. We construct the hidden node with the Radial Basis functions their localization are similar with approximation target function in the plane of the Time and Frequency. We finally make a good decision of the initial structure for function approximation using genetic algorithm

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Design of the Structure for Scaling-Wavelet Neural Network Using Genetic Algorithm (유전 알고리즘을 이용한 스케일링-웨이블릿 복합 신경회로망 구조 설계)

  • 김성주;서재용;연정흠;김성현;전홍태
    • Proceedings of the IEEK Conference
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    • 2001.06c
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    • pp.25-28
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    • 2001
  • RBFN has some problem that because the basis function isn't orthogonal to each others the number of used basis function goes to big. In this reason, the Wavelet Neural Network which uses the orthogonal basis function in the hidden node appears. In this paper, we propose the composition method of the actual function in hidden layer with the scaling function which can represent the region by which the several wavelet can be represented. In this method, we can decrease the size of the network with the pure several wavelet function. In addition to, when we determine the parameters of the scaling function we can process rough approximation and then the network becomes more stable. The other wavelets can be determined by the global solutions which is suitable for the suggested problem using the genetic algorithm and also, we use the back-propagation algorithm in the learning of the weights. In this step, we approximate the target function with fine tuning level. The complex neural network suggested In this paper is a new structure and important simultaneously in the point of handling the determination problem in the wavelet initialization.

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Modeling of plasma etch process using genetic algorithm and radial basis function network (유전자 알고리즘과 레이디얼 베이시스 함수망을 이용한 플라즈마 식각공정 모델링)

  • Park, Kyoung-Young;Kim, Byung-Whan
    • Proceedings of the Korean Institute of Electrical and Electronic Material Engineers Conference
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    • 2004.11a
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    • pp.159-162
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    • 2004
  • 플라즈마 공정 모델 개발에 역전파 신경망이 가장 많이 응용되고 있으나, 관여하는 다수의 학습인자로 인해 그 최적화가 매우 어렵다. Radial basis function network (RBFN)은 관여하는 학습인자의 수가 적어 그 최적화가 상대적으로 용이하지만, 두인자의 다양한 조합에 의해 RBFN의 예측성능이 상당히 영향을 받을 수 있다. 본 연구에서는 학습인자 상호간의 작용을 유전자 알고리즘 (genetic algorithm-GA)을 이용하여 최적화하는 기법을 소개한다. 제안하는 알고리즘을 광도파로 제작을 위해 수행한 실리카 식각공정 데이터에 적용하여 평가하였다. 평가에 이용된 식각 응답은, 실리카 식각률, aluminum (Al) 식각률, Al 선택비, 그리고 실리카 프로파일 각도이다. 최적화한 모델은 종래의 모델과 비교하였으며, 그 향상도는 실리카 식각률, Al 식각률, Al 선택비, 그리고 실리카 프로파일 각도에 대해서 각 기 0.8%, 32.4%, 20.3%, 1.3% 등이었다. Al 식각률과 선택비에 대해서 예측성능은 상당이 향상되었다.

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Tracking Detection using Information Granulation-based Fuzzy Radial Basis Function Neural Networks (정보입자기반 퍼지 RBF 뉴럴 네트워크를 이용한 트랙킹 검출)

  • Choi, Jeoung-Nae;Kim, Young-Il;Oh, Sung-Kwun;Kim, Jeong-Tae
    • The Transactions of The Korean Institute of Electrical Engineers
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    • v.58 no.12
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    • pp.2520-2528
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    • 2009
  • In this paper, we proposed tracking detection methodology using information granulation-based fuzzy radial basis function neural networks (IG-FRBFNN). According to IEC 60112, tracking device is manufactured and utilized for experiment. We consider 12 features that can be used to decide whether tracking phenomenon happened or not. These features are considered by signal processing methods such as filtering, Fast Fourier Transform(FFT) and Wavelet. Such some effective features are used as the inputs of the IG-FRBFNN, the tracking phenomenon is confirmed by using the IG-FRBFNN. The learning of the premise and the consequent part of rules in the IG-FRBFNN is carried out by Fuzzy C-Means (FCM) clustering algorithm and weighted least squares method (WLSE), respectively. Also, Hierarchical Fair Competition-based Parallel Genetic Algorithm (HFC-PGA) is exploited to optimize the IG-FRBFNN. Effective features to be selected and the number of fuzzy rules, the order of polynomial of fuzzy rules, the fuzzification coefficient used in FCM are optimized by the HFC-PGA. Tracking inference engine is implemented by using the LabVIEW and loaded into embedded system. We show the superb performance and feasibility of the tracking detection system through some experiments.

The Structure of Scaling-Wavelet Neural Network (스케일링-웨이블렛 신경회로망 구조)

  • 김성주;서재용;김용택;조현찬;전홍태
    • Proceedings of the Korean Institute of Intelligent Systems Conference
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    • 2001.05a
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    • pp.65-68
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    • 2001
  • RBFN has some problem that because the basis function isnt orthogonal to each others the number of used basis function goes to big. In this reason, the Wavelet Neural Network which uses the orthogonal basis function in the hidden node appears. In this paper, we propose the composition method of the actual function in hidden layer with the scaling function which can represent the region by which the several wavelet can be represented. In this method, we can decrease the size of the network with the pure several wavelet function. In addition to, when we determine the parameters of the scaling function we can process rough approximation and then the network becomes more stable. The other wavelets can be determined by the global solutions which is suitable for the suggested problem using the genetic algorithm and also, we use the back-propagation algorithm in the learning of the weights. In this step, we approximate the target function with fine tuning level. The complex neural network suggested in this paper is a new structure and important simultaneously in the point of handling the determination problem in the wavelet initialization.

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