• 지능정보연구
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• 제12권3호
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• pp.67-82
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• 2006

가상 로봇의 행동 진화를 위해서 규칙 구성자와 연결 구성자를 구성하여 분류 규칙과 진화 신경망을 형성하는 혼합형 행동 진화 모델(Hybrid Behavior Evolution Model)을 제안한다. 본 모델에서는 행동 지식을 두 수준에서 표현하였다. 상위 수준에서는 규칙 구성자와 연결 구성자를 구성하여 표현력을 향상시켰다. 하위 수준에서는 행동 지식을 비트 스트링 형태의 염색체로 표현하여, 이들 염색체를 대상으로 유전자 연산을 적용하여 학습을 수행시켰다. 적합도가 최적인 염색체를 추출하여 가상 로봇을 구성하였다. 구성된 가상 로봇은 주변 상황을 인식하여 입력 정보와 규칙 정보를 이용하여 패턴을 분류하였고, 그 결과를 신경망에서 처리하여 행동하였다. 제안된 모델을 평가하기 위해서 HBES(Hybrid Behavior Evolution System)를 개발하여 가상 로봇의 먹이 수집 문제에 적용하였다. 제안한 시스템을 실험한 결과, 동일한 조건의 진화 신경망보다 학습 시간이 적게 소요되었다. 그리고, 규칙이 적합도 향상에 주는 영향을 평가하기 위해서, 학습이 완료된 염색체들에 대해서 규칙을 적용한 것과, 그렇지 않은 것을 각각 수행하여 적합도를 측정하였다. 그 결과, 규칙을 적용하지 않으면 적합도가 저하되는 것을 확인하였다. 제안된 모델은 가상 로봇의 행동 진화에 있어서 기존의 진화 신경망 방식 보다 학습 성능이 우수하고 규칙적인 행동을 수행하는 것을 확인하였다.

• Asian Pacific Journal of Cancer Prevention
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• 제16권2호
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• pp.689-692
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• 2015

Background: Incorporation of molecular analysis of the epidermal growth factor receptor (EGFR) gene into routine clinical practice has shown great promise to provide personalized therapy of the non-small cell lung cancer (NSCLC) in the developed world. However, the genetic testing of EGFR mutations has not yet become routine clinical practice in territories remote from the central regions of Russia. Therefore, we aimed to study the frequency of major types of activating mutations of the EGFR gene in NSCLC patients residing in West Siberia. Materials and Methods: We examined EGFR mutations in exons 19 and 21 in 147 NSCLC patients (excluding squamous cell lung carcinomas) by real time polymerase chain reaction. Results: EGFR mutations were detected in 28 of the 147 (19%) patients. There were 19 (13%) cases with mutations in exon 19 and 9 cases (6%) in exon 21. Mutations were more frequently observed in women (42%, p=0.000) than in men (1%). A significantly higher incidence of EGFR mutations was observed in bronchioloalveolar carcinomas (28%, p=0.019) and in adenocarcinomas (21%, p=0.024) than in large cell carcinomas, mixed adenocarcinomas, and NOS (4%). The EGFR mutation rate was much higher in never-smokers than in smokers: 38% vs. 3% (p=0.000). The frequency of EGFR mutations in the Kemerovo and Tomsk regions was 19%. Conclusions: The incorporation of molecular analysis of the EGFR gene into routine clinical practice will allow clinicians to provide personalised therapy, resulting in a significant increase in survival rates and improvement in life quality of advanced NSCLC patients.

• Journal of Genetic Medicine
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• 제5권2호
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• pp.131-135
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• 2008

전형적 갈락토오스혈증(classical galactosemia)은 상염색체 열성으로 유전되는 galactose-1-phosphate uridyltransferase(GALT) 효소의 결핍에 의한 갈락토오스 대사 장애 질환이며 galactose-1-phosphate가 축적되어 간, 뇌, 신경에 심각한 영향을 끼친다. 본 증례는 GALT 효소 결핍 신생아에서, 출생 후 락토오스가 함유된 일반 수유를 시작하면서 심한 황달, 구토, 심한 출혈경향 및 간 부전 등이 발생하였다. 신생아 선별검사에서 갈락토오스의 증가로 재검을 의뢰하였고, 그 사이에 일반수유로 인해 임상증상이 악화 되어 생후 11일째 본원으로 전원되었다. 효소분석검사와 유전자검사로 확진 전에 임상적으로 갈락토오스혈증이 의심이 되어 소이 분유로 수유를 시작하였고, 이후 심한 황달과 출혈경향의 호전, 간기능 호전, 체중 증가와 전신상태가 회복되어 11일간의 입원 이후 퇴원하였다. 갈락토오스혈증의 임상 증상에 대한 올바른 이해를 통해 조기 진단하여 식이요법 등의 치료로 사망률을 줄이고, 유전자검사로 갈락토오스혈증을 확진하여 유전상담 및 산전진단에 유용하게 이용할 수 있는데, 본 증례에서는 효소분석 결과 GALT 효소 결핍증과 유전자검사에서 아직까지 보고된 적이 없는 GALT 유전자의 이형 돌연변이를 경험 하였기에 이를 보고하는 바이다.

• Journal of Genetic Medicine
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• 제5권1호
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• pp.21-25
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• 2008

목 적 : 최근 여러 국가에서 빠르게 탠덤매스 신생아 선천성 대사이상질환 선별 프로그램을 채택하고 있으며 많은 질환들이 검출되고 있다. 본 기관에서는 2001년 4월부터 탠덤 매스 선천성 대사이상 질환 신생아 선별 검사를 시작하였다. 연구자들은 한국에서의 탠덤매스 선천성 대사이상질환 검출율 및 탠덤매스 유용성에 대해 평가하고자 하였다. 방 법 : 2001년 4월부터 2007년 12월까지 본원에서는 탠덤매스를 이용하여 신생아 및 고위험군에 대해 선별검사를 시행하였다. 검체로부터 아실카르틴과 아미노산을 추출하여 부탄올로 유도체화시킨 후 탠덤매스에 장착하여 분석하였다. 탠덤매스 선별검사 재검, 소변 유기산 및 혈장 아미노산 검사 등을 포함한 확진 검사는 개별적으로 시행되었다. 결 과 : 총 의뢰건수는 284,933건으로 신생아 251,799건 및 고위험군 33,134건이었다. 소환율은 0.4%(1158건)이었으며, 이들 중 true positive는 117건(0.04%)이었다. 아미노산 대사 이상 질환은 총 78건(25/53), 유기산 대사이상 질환은 총 27건(16/11건) 및 지방산 산화대사이상 질환은 총 12건(5/7건)으로 전체 질환에 대한 검출율은 신생아 1:5,000이었으며 전체군 1:2,000이었다. 결 론 : 탠덤매스 신생아 선별검사는 조기 진단 및 치료가 필요한 많은 선천성 대사이상질환의 검출을 용이하게 해주었다. 그러므로, 반드시 모든 신생아들에 대한 국가지원 탠덤매스 선별검사 확대 적용 및 추적관리 시스템이 구축이 필요할 것으로 판단된다.

• Asian Pacific Journal of Cancer Prevention
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• 제14권11호
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• pp.6673-6680
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• 2013

Objective: Insulin resistance (IR) is an established risk factor for colorectal cancer (CRC). Given that CRC and IR physiologically overlap and the calpain-10 gene (CAPN10) is a candidate for IR, we explored the association between CAPN10 and CRC risk. Methods: Blood samples of 400 case-control pairs were genotyped, and the lifestyle and dietary habits of these pairs were recorded and collected. Unconditional logistic regression (LR) was used to assess the effects of CAPN10 SNP43 and SNP19, and environmental factors. Both generalized multifactor dimensionality reduction (GMDR) and the classification and regression tree (CART) were used to test gene-environment interactions for CRC risk. Results: The GA+AA genotype of SNP43 and the Del/Ins+Ins/Ins genotype of SNP19 were marginally related to CRC risk (GA+AA: OR = 1.35, 95% CI = 0.92-1.99; Del/Ins+Ins/Ins: OR = 1.31, 95% CI = 0.84-2.04). Notably, a high-order interaction was consistently identified by GMDR and CART analyses. In GMDR, the four-factor interaction model of SNP43, SNP19, red meat consumption, and smoked meat consumption was the best model, with a maximum cross-validation consistency of 10/10 and testing balance accuracy of 0.61 (P < 0.01). In LR, subjects with high red and smoked meat consumption and two risk genotypes had a 6.17-fold CRC risk (95% CI = 2.44-15.6) relative to that of subjects with low red and smoked meat consumption and null risk genotypes. In CART, individuals with high smoked and red meat consumption, SNP19 Del/Ins+Ins/Ins, and SNP43 GA+AA had higher CRC risk (OR = 4.56, 95%CI = 1.94-10.75) than those with low smoked and red meat consumption. Conclusions: Though the single loci of CAPN10 SNP43 and SNP19 are not enough to significantly increase the CRC susceptibility, the combination of SNP43, SNP19, red meat consumption, and smoked meat consumption is associated with elevated risk.

• Journal of Yeungnam Medical Science
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• 제24권1호
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• pp.1-10
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• 2007

만성 피로증후군은 인지능력 감소, 근골격 및 수면 장애증상을 가지며 심한 피로감을 특징으로 하는 증상군을 말한다. 아직 명확한 진단기법이나 확립된 표식자가 없으며, 타질환을 배제한 후 증상기준에 따라 진단하고 있다. 병태생리도 명확한 인과관계가 증명되지 않고 있으며 치료 역시 환자의 증상개선과 삶의 질 향상을 목표로 여러 방법을 동원하고 있는 실정이다. 그러나 대조군과 비교한 많은 연구들에서 중추신경계, 신경호르몬 조절 시스템 및 만성 면역 활성 등의 이상이 보고되고 있으며, 이러한 결과들을 근거로 현재 다양한 치료방법이 동원되고 있다. 또한 이 증후군은 가족력의 가능성이 크므로 향후 유전 및 환경적 요인에 관한 연구가 활발해질 것으로 보인다. 대부분의 환자들은 우울증이나 범불안 장애 등을 동반하고 있으며, 이들이 병태생리와 관련 있을 가능성도 크다고 볼 수 있다. 결론적으로 이 증후군은 개인의 유전적 요소에 생리학적, 정신적 요인과 더불어 영양, 생활습관, 스트레스, 호르몬 등의 다양한 요인들이 복합적으로 상호 작용하여 만성적인 피로감과 다양한 증상을 나타내는 것으로 볼 수 있다. 환자-의사간 긴밀한 관계를 바탕으로 약물 및 비약물요법과 인지요법, 단계적 운동요법 등 효과가 인정된 치료방법을 꾸준히 사용하면 증상개선과 삶의 질 향상에 도움이 될 것으로 생각한다.

• Asian Pacific Journal of Cancer Prevention
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• 제17권4호
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• pp.1903-1907
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• 2016

Background: Studies of effects of IL-1 polymorphisms, CYP2C19 genotype together with antibiotic resistance for H. pylori eradication are rare worldwide. The present study was designed to evaluate efficacy of 10-day sequential therapy (SQT) and 14-day standard triple therapy (STT) with four- times-daily dosing of amoxicillin for H. pylori eradication related to these important host and bacterial factors in Thailand. Materials and Methods: This prospective randomized study was performed during March 2015 to January 2016. H. pylori infected gastritis patients were randomized to receive 10-day sequential therapy and 14-day standard triple therapy. CYP2C19 genotyping, IL1 polymorphism (IL-1B and IL-1RN genotypes) and antibiotic susceptibility tests were performed in all patients. 13C-UBT was conducted to confirm H. pylori eradication at least 4 weeks after treatment. Results: A total of 100 patients (33 males and 67 females, mean age=51.1 years) were enrolled. Eradication rate by PP analysis was 97.9% (47/48) with the 10-day SQT regimen and 87.8% (43/49) with 14-day STT regimen (97.9% vs 87.8%; p-value=0.053). Antibiotic susceptibility testing demonstrated 45% resistance to metronidazole, 14.8% to clarithromycin, and 24.1% to levofloxacin. CYP2C19 genotyping revealed 44.9% RM, 49% IM and 6.1% PM. IL-1B and IL-1RN genotypes were demonstrated as 21.4% for CC, 48.1% for TC, 36.8% for TT, 72.7% for 1/1, and 21.2% for 1/2 genotypes, respectively. The 10-day SQT regimen provided 100% eradication in patients with clarithromycin or dual clarithromycin and levofloxacin H. pylori resistant strains. Moreover, the 10-day SQT regimen resulted in a 100% eradication rate in all patients with CYP2C19 genotype RM and almost type of IL-1B (TC and TT) and IL1-RN genotypes ( 1/2 and other). Conclusions: Treatment with 10-day sequential therapy is highly effective for H. pylori eradication regardless of the effects of clarithromycin resistance, dual clarithromycin and levofloxacin resistance, CYP2C19 genotype, IL-1B and IL1-RN genetic polymorphisms and can be used as effective first line therapy in Thailand.

• Asian Pacific Journal of Cancer Prevention
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• 제17권4호
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• pp.1917-1923
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• 2016

Background: Lynch Syndrome (LS) is a familial cancer condition caused by germline mutations in DNA mismatch repair genes. Individuals with LS have a greatly increased risk of developing colorectal cancer (CRC) and it is therefore important to identify mutation carriers so they can undergo regular surveillance. Tumor DNA from LS patients characteristically shows microsatellite instability (MSI). Our aim here was to screen young CRC patients for MSI as a first step in the identification of unrecognized cases of LS in the Saudi population. Materials and Methods: Archival tumor tissue was obtained from 284 CRC patients treated at 4 institutes in Dammam and Riyadh between 2006 and 2015 and aged less than 60 years at diagnosis. MSI screening was performed using the BAT-26 microsatellite marker and positive cases confirmed using the pentaplex MSI analysis system. Positive cases were screened for BRAF mutations to exclude sporadic CRC and were evaluated for loss of expression of 4 DNA mismatch repair proteins using immunohistochemistry. Results: MSI was found in 33/284 (11.6%) cases, of which only one showed a BRAF mutation. Saudi MSI cases showed similar instability in the BAT-26 and BAT-25 markers to Australian MSI cases, but significantly lower frequencies of instability in 3 other microsatellite markers. Conclusions: MSI screening of young Saudi CRC patients reveals that approximately 1 in 9 are candidates for LS. Patients with MSI are strongly recommended to undergo genetic counselling and germline mutation testing for LS. Other affected family members can then be identified and offered regular surveillance for early detection of LS-associated cancers.

• Asian Pacific Journal of Cancer Prevention
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• 제17권7호
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• pp.3309-3315
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• 2016

Helicobacter pylori as the second most common cause of gastric cancer in the world infects approximately half of the developed countries population and 80% of the population living in developing countries. Integrons as genetic reservoirs play major roles in dissemination of antimicrobial resistance genes. To the best of our knowledge, this is the first study to report carriage of class 1 and 2 integrons and associated gene cassettes in H. pylori isolates from Iran. This cross-sectional study was conducted in Tehran among 110 patients with H. pylori infection. Antimicrobial susceptibility testing (AST) for H. pylori strains were assessed by the micro broth dilution method. Class 1 and 2 integrons were detected using PCR. In order to determine gene cassettes, amplified fragments were subjected to DNA sequencing of both amplicon strands. The prevalence of resistance to clarithromycin, metronidazole, clarithromycin, tetracycline, amoxicillin, rifampin, and levofloxacin were 68.2% (n=75), 25.5% (n=28), 24.5% (n=27), 19.1% (n=21), 18.2% (n=20) and 16.4% (n=18), respectively. Frequency of multidrug resistance among H. pylori isolates was 12.7%. Class 2 integron was detected in 50 (45.5%) and class 1 integron in 10 (9.1%) H. pylori isolates. The most predominant gene cassette arrays in class 2 integron-bearing H. pylori were included sat-era-aadA1, dfrA1-sat2-aadA1, blaoxa2 and, aadB whereas common gene cassette arrays in class 1 integron were aadB-aadA1-cmlA6, aacA4, blaoxa2, and catB3. The high frequency of class 2 integron and multidrug resistance in the present study should be considered as a warning for clinicians that continuous surveillance is necessary to prevent the further spread of resistant isolates.

• 대한본초학회지
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• 제20권2호
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• pp.27-33
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• 2005

Objectives : This is the study of the application as the ingredients of cosmetics through the examination of the function for physiological activity of Chestnut inner shell. Methods : Chestnut inner shell, which had been extracted, concentrated, and freeze drying with water and ethanol, have been used for the experiment. The effects on electronic donating ability, SOD-like activity, xanthine oxidase inhibition, whitening effect, nitric oxide inhibition have been investigated in the physiological activity measurement of function experiment. Results : We used BHA and kogic acid for the comparative. As a result of testing electron donating ability, at over 100ppm of water extract and ethanol extract, BHA showed relatively high donating ability by more than 90%. And as a result of measuring SOD like activity, 1000ppm of water extract showed an effect of 30% and ethanol extract showed an effect of 40%, BHA showed an effect of 30%. In the xanthine oxidase inhibition test, 1000ppm of water extract showed an effect of 70% and ethanol extract showed an effect of 63%, BHA showed an effect of 100%. In the tyrosinase inhibition test, 1000ppm of water extract showed an effect of 55% and ethanol extract showed an effect of 87%, Kogic acid showed an effect of 98%. In the anti-inflammatory test, the water extract and ethanol extract inhibited the generation of nitric oxide. Conclusions : The results indicated that extract of Chestnut inner shell can be used as a natural ingredients with biological function in cosmetics ingredients.