• 제목/요약/키워드: Genetic Approach

검색결과 1,327건 처리시간 0.028초

Tracing the origin of fish without hatchery information: genetic management of stock enhancement for mangrove red snapper (Lutjanus argentimaculatus) in Taiwan

  • Hsu, Te-Hua;Huang, Chang-Wen;Lin, Cheng-Hui;Lee, Hung-Tai;Pan, Chieh-Yu
    • Fisheries and Aquatic Sciences
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    • 제23권5호
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    • pp.13.1-13.7
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    • 2020
  • Stock enhancement is considered to be a valuable approach for restoring fishery resources. Because no specific official institution in Taiwan is responsible for the production of fry, the released fry are purchased directly from the private sector. However, fishermen from the private industry have not established a genetic background, so the genetic composition for each batch of released fry is unclear. Mangrove red snapper (Lutjanus argentimaculatus), a prominent species released in Taiwan, was collected after its official release. One hundred and two field samples were compared with four batches of hatchery fry (n = 685) by using a microsatellite-based multiplex PCR assay. Four of the field samples (3.9%; 4/102) were revealed to be from a fish farm and most likely from a single batch. This study revealed that wild mangrove red snappers are genetically different from those originating from farms, and their origins can be traced through molecular markers, even without information on breeding stocks.

Common Genetic Variations in the MUC5AC Gene are Not Related to Helicobacter pylori Serologic Status

  • Zhou, Cheng-Jiang;Zhang, Liu-Wei;Gao, Fang;Zhang, Bin;Wang, Ying;Chen, Da-Fang;Jia, Yan-Bin
    • Asian Pacific Journal of Cancer Prevention
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    • 제15권24호
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    • pp.10719-10722
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    • 2015
  • Several lines of evidence suggest that MUC5AC genetic polymorphisms might confer susceptibility to H. pylori infection and therefore gastric cancer risk. We here assessed the association of common polymorphisms in the MUC5AC gene with H. pylori seroprevalence using an LD-based tagSNP approach in a north-western Chinese Han population. A total of 12 tagSNPs were successfully genotyped among 281 unrelated ethnic Han Chinese who had no cancer history, and no identifiable gastric disease or genetic disease. No significant association between any alleles, genotypes or haplotypes and H. pylori seroprevalence was observed. Our results suggest that common genetic variations in MUC5AC gene might not make a major contribution to the risk of H. pylori infection.

An Interactive Approach Based on Genetic Algorithm Using Ridden Population and Simplified Genotype for Avatar Synthesis

  • Lee, Ja-Yong;Lee, Jang-Hee;Kang, Hoon
    • International Journal of Fuzzy Logic and Intelligent Systems
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    • 제2권3호
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    • pp.167-173
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    • 2002
  • In this paper, we propose an interactive genetic algorithm (IGA) to implement an automated 2D avatar synthesis. The IGA technique is capable of expressing user's personality in the avatar synthesis by using the user's response as a candidate for the fitness value. Our suggested IGA method is applied to creating avatars automatically. Unlike the previous works, we introduce the concepts of 'hidden population', as well as 'primitive avatar' and 'simplified genotype', which are used to overcome the shortcomings of IGA such as human fatigue or reliability, and reasonable rates of convergence with a less number of iterations. The procedure of designing avatar models consists of two steps. The first step is to detect the facial feature points and the second step is to create the subjectively optimal avatars with diversity by embedding user's preference, intuition, emotion, psychological aspects, or a more general term, KANSEI. Finally, the combined processes result in human-friendly avatars in terms of both genetic optimality and interactive GUI with reliability.

Variation of Shell Color in Three Geographic White Clam ($Meretrix$ $lusoria$) Populations of the Yellow Sea

  • Yoon, Jong-Man;Park, Kyung-Il;Choi, Sang-Hoon
    • 한국발생생물학회지:발생과생식
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    • 제16권1호
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    • pp.47-51
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    • 2012
  • Genomic DNAs (gDNAs) were isolated from the hard clam ($Meretrix$ $lusoria$, Roding, 1798) populations of Gunsan located in the Yellow Sea of the Korean peninsula. Genetic distances among different individuals of the LSCP (light shell color population) population of the hard clam (lane 1-11), GSCP (grey shell color population) population of the hard clam (lane 12-22) and DSCP (dark shell color population) population of the hard clam (lane 23-33), respectively, were generated using Systat version 10 according to the bandsharing values and similarity matrix. The dendrogram, generated by seven reliable oligonucleotides primers, indicates 3 genetic clusters. LSCP population could be evidently discriminated with the other two populations among three populations. The longest genetic distance (0.801) was found to exist between individuals in the two populations, between individuals' no. 33 of the DSCP population and no. 06 of the LSCP population. The higher fragment sizes (>2,000 bp) are much more observed in the GSCP population. Three hard clam populations can be clearly distinguished, especially, by their morphological characters and PCR-based approach.

Routing Protocols for VANETs: An Approach based on Genetic Algorithms

  • Wille, Emilio C. G.;Del Monego, Hermes I.;Coutinho, Bruno V.;Basilio, Giovanna G.
    • KSII Transactions on Internet and Information Systems (TIIS)
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    • 제10권2호
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    • pp.542-558
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    • 2016
  • Vehicular Ad Hoc Networks (VANETs) are self-configuring networks where the nodes are vehicles equipped with wireless communication technologies. In such networks, limitation of signal coverage and fast topology changes impose difficulties to the proper functioning of the routing protocols. Traditional Mobile Ad Hoc Networks (MANET) routing protocols lose their performance, when communicating between vehicles, compromising information exchange. Obviously, most applications critically rely on routing protocols. Thus, in this work, we propose a methodology for investigating the performance of well-established protocols for MANETs in the VANET arena and, at the same time, we introduce a routing protocol, called Genetic Network Protocol (G-NET). It is based in part on Dynamic Source Routing Protocol (DSR) and on the use of Genetic Algorithms (GAs) for maintenance and route optimization. As G-NET update routes periodically, this work investigates its performance compared to DSR and Ad Hoc on demand Distance Vector (AODV). For more realistic simulation of vehicle movement in urban environments, an analysis was performed by using the VanetMobiSim mobility generator and the Network Simulator (NS-3). Experiments were conducted with different number of vehicles and the results show that, despite the increased routing overhead with respect to DSR, G-NET is better than AODV and provides comparable data delivery rate to the other protocols in the analyzed scenarios.

유전 알고리즘을 이용한 전기 임피던스 단층촬영법의 영상복원 (Image Reconstruction Using Genetic Algorithm in Electrical Impedance Tomograghy)

  • 김호찬;문동춘;김민찬;김신;이윤준
    • 제어로봇시스템학회논문지
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    • 제9권1호
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    • pp.50-56
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    • 2003
  • In electrical impedance tomography(EIT), various image reconstruction algorithms have been used in order to compute the internal resistivity distribution of the unknown object with its electric potential data at the boundary. Mathematically the EIT image reconstruction algorithm is a nonlinear ill-posed inverse problem. This paper presents a new combined method based on genetic algorithm(GA) and modified Newton-Raphson(mNR) algorithm via two-step approach for the solution of the static EIT inverse problem. In the first step, each mesh is classified into three mesh groups: target, background, and temporary groups. The mNR algorithm can be used to determine the region of group. In the second step, the values of these resistivities are determined using genetic algorithm. Computer simulations with the 32 channels synthetic data show that the spatial resolution of reconstructed images by the proposed scheme is improved compared to that of the mNR algorithm at the expense of increased computational burden.

주가지수 관계와 유전자 알고리즘을 이용한 주식예측 (Stock Forecasting using Stock Index Relation and Genetic Algorithm)

  • 김상호;김동현;한창희;김원일
    • 한국지능시스템학회논문지
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    • 제18권6호
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    • pp.781-786
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    • 2008
  • 이 논문에서 우리는 선형결합으로 표현된 여러 가지 주가지수의 관계를 찾아내어 주식의 등락을 예측하는 방법을 제안한다. 제안된 방법에서 중요한 점은 전체 주가지수 중에서 예측하는 지수와 관계가 있는 주가지수들을 선택하는 것과 그 주가지수의 적절한 관계를 찾아내는 것이다. 전체 주가지수와의 관계를 설정하는 것은 불가능하기 때문에 밀접한 관계가 있는 주가지수만을 이용하였고 주가지수의 관계를 찾는 방법으로 유전자 알고리즘(GA : Genetic Algorithm)을 사용하였다. 제안된 방법을 이용하여 2005년부터 2007년도까지의 실제 주가지수를 가지고 모의투자 시뮬레이션을 한 결과 모의 투자금액이 230% 증가하는 것을 확인하였다.

Evolutionary computational approaches for data-driven modeling of multi-dimensional memory-dependent systems

  • Bolourchi, Ali;Masri, Sami F.
    • Smart Structures and Systems
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    • 제15권3호
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    • pp.897-911
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    • 2015
  • This study presents a novel approach based on advancements in Evolutionary Computation for data-driven modeling of complex multi-dimensional memory-dependent systems. The investigated example is a benchmark coupled three-dimensional system that incorporates 6 Bouc-Wen elements, and is subjected to external excitations at three points. The proposed technique of this research adapts Genetic Programming for discovering the optimum structure of the differential equation of an auxiliary variable associated with every specific degree-of-freedom of this system that integrates the imposed effect of vibrations at all other degrees-of-freedom. After the termination of the first phase of the optimization process, a system of differential equations is formed that represent the multi-dimensional hysteretic system. Then, the parameters of this system of differential equations are optimized in the second phase using Genetic Algorithms to yield accurate response estimates globally, because the separately obtained differential equations are coupled essentially, and their true performance can be assessed only when the entire system of coupled differential equations is solved. The resultant model after the second phase of optimization is a low-order low-complexity surrogate computational model that represents the investigated three-dimensional memory-dependent system. Hence, this research presents a promising data-driven modeling technique for obtaining optimized representative models for multi-dimensional hysteretic systems that yield reasonably accurate results, and can be generalized to many problems, in various fields, ranging from engineering to economics as well as biology.

Genetic Polymorphism of Interleukin 10 Gene and Sasang Constitution in Bell's Palsy Patients

  • Kim, Jong-Won;Seo, Jung-Chul;Jung, Tae-Young
    • 동의생리병리학회지
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    • 제19권2호
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    • pp.515-519
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    • 2005
  • We hypothesized that the IL10 gene is important candidate in the development of Bell's palsy and specific genotypic and allelic variations should be associated with Bell's palsy in the Korean population. In this study, we assessed the SNP (single-nucleotide polymorphism) of IL10 in patients with Bell's palsy. 62 patients with Bell's palsy were selected from the subjects who visited for the Bell's palsy service of the department of acupuncture & moxibustion, college of Oriental Medicine, Daegu Haany University from May 2002 to May 2003. Pyrosequencing was performed for genetic analyses. There was no statistically significant genotypic distribution difference between control and Bell's palsy group And there was not statistically significant allelic frequency difference between control and Bell's palsy group. In this study the IL10 genotypemight not be the risk factor of Bell's palsy patients in Korean. studies will be necessary for the exact genetic markers. Establishment of more systemic approach and high quality of prospective cohorts will be necessary for the good prediction of genetic markers.

Review on the development of virus resistant plants in Alstroemeria

  • Park, Tae-Ho;Han, In-Song;Kim, Jong-Bo
    • Journal of Plant Biotechnology
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    • 제37권4호
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    • pp.370-378
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    • 2010
  • This review describes the stratagies of development of virus-resistant Alstroemeria plants using the genetic modification system. Despite of increasing of its importance in cut flower market, improvements of some horticultuirally important traits such as fragrance, long vase-life, virus resistance and tolerance against abiotic stresses are lack of the breeding program in Alstroemeria. Of these traits, virus-resistance is quite difficult to develop in Alstroemeria plants due to the limitations of genetic variation in the existed germplasm. To extend the genetic variation, plant biotechnological techniques such as genetic transformation and tissue culture should be combined to develop virus-resistant line in Alstroemeria. In this review, several strategies for the generation of virus-resistance by using natural resistance genes, pathogen-derived genes and other sources including pathogen-derived proteins, virus-specific antibodies and ribosome-inactivating proteins are presented. Also, brief histories of breeding, tissue culture, and transformation system in Alstroemeria plants are described to inderstand of the application of transgenic approach for the development of virus-resistance in Alstroemeria species.