• 한국동물학회지
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• 제33권4호
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• pp.446-453
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• 1990

본 실험은 레티노익산에 의해 F9 Teratocarcinoma Stem Cell의 분화를 유도하고 이분화과정에서 세포형태의 변화와 라미닌유전자의 발현을 조사 하였다. 분화되지 않은 F9 Stem Cell은 지속적으로 증식을 하며 세포간의 간격을 구분하기 어령루 뿐만 아니라 불규칙적인 모양을 하고 있으나,레티노익산과 dibutyryl cyclic AMP처리후의 분화된 F9세포는 둥글고 평평한 모양을 나타내며 세포성장은 중지되었다. Northern blot분석에 의하여 레티노익산과 cyclic AMP처리 후의 F9세포내에서 라미닌 유전자의 발현은 현저하게 증가하였다. 즉, 라미닌 B1유전자 발현은 분화과정 동안 최소한 30배, 라미닌 B2 유전자의 발현은 약 20배 증가하였다. 또한 라미닌 항체를 이용한 면역형광 분석결과는 Northern 분석결과와 일치하게 분화 후에 라미닌 단백질 합성이 크게 증가되었으며, 생성된 라미닌 단백질은 거의 세포표면에 분포된 것으로 나타났다. 이러한 결과로부터, 레티노익산에 의해 F9 Stem Cell의 분화가 유도되며 이 분화과정에서의 형태적인 변화와 진행은 라미닌의 생성과 밀접한 관련이 있다고 추측된다.

• Asian-Australasian Journal of Animal Sciences
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• 제23권10호
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• pp.1268-1275
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• 2010

Post-weaning diarrhoea (PWD) and oedema disease (ED) caused by E. coli F18 always result in economic losses to pig producers, and no effective methods of controlling PWD and ED are presently available. FUT1 has been identified as a candidate gene controlling the expression of E. coli F18 receptor. This study examined the correlation between F18ab and F18ac adhesion phenotypes and the polymorphism at position M307 of the FUT1 gene in three pig breeds (231 Large White, 107 Landrace and 109 Songliao Black). The results showed: i) Both the susceptible genotypes (GG and GA) and the adhesion phenotypes (adhesive or weekly adhesive) were dominant in all three breeds with frequencies over 95%. ii) Three adhesion patterns of the two F18 variants F18ab and F18ac, i.e., ($ab^+$, $ac^+$), ($ab^+$, $ac^-$) and ($ab^-$, $ac^-$), were found in all three breeds, and there was no significant difference in the distribution of adhesion phenotypes of the two variants (separately or jointly) among the three breeds (p>0.05). iii) The FUT1 M307 genotypes were completely associated with the F18ab adhesion phenotypes and very strongly associated with the F18ac adhesion phenotypes. All individuals of genotype AA were non-adhesive to both F18ab and F18ac. All individuals of genotype GG or GA were adhesive to F18ab, whereas 11% of them were non-adhesive to F18ac. These results suggest that the polymorphism at FUT1 M307 can be used for marker-assisted selection of PWD and ED resistant pigs.

• Nuclear Medicine and Molecular Imaging
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• 제40권4호
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• pp.218-227
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• 2006

목적 : 헤르페스 심플렉스 1형 바이러스 티미딘 키나제(Herpes simplex virus type 1 thymidine kinase. HSV1-tk) 유전자는 보고 유전자로서 필요한 조건뿐만 아니라 별도의 치료 유전자를 따로 이입할 필요가 없다는 장점을 가지고 있어 유전자 영상과 치료에서 가장 널리 사용되는 유전자이다. 본 연구에서는 간암세포주에서 HSV1-tk 보고 유전자 발현을 비침습적 PET 영상으로 평가하는데 있어서 $9-(4-[^{18}F]Fluoro-3-hydroxymethylbutyl)$guanine ($[^{18}F]FHBG$)의 유용성을 평가하고자 하였다. 대상 및 방법 : $[^{18}F]FHBG$는 triester로부터 8단계를 거쳐 합성하였다. $[^{18}F]FHBG$는 전구체로 N2-monomethoxytrityl-9-[4-(tosyl)-3-monomethoxytritylmethylbutyl]guanine를 사용하고 kyptofix [2.2.2.]를 이용한 친핵성 반응으로 $120^{\circ}C$에서 20분 동안 반응한 후에 1 N HCl로 보호기를 제거함으로써 합성하였다. HSV1-tk 보고 유전자가 이입되어 있는 세포주인 MCA-tk와 이입되지 않은 MCA 세포주를 이용하여 in vitro 상에서의 $[^{18}F]FHBG$의 섭취 및 방출 실험을 실시하였으며 섭취량과 발현량의 상관성 평가를 위해 세포수 백분율에 따른 섭취실험을 실시하였다. In vivo 상에서의 평가를 위하여 피하 종양 형성 동물모델을 이용하여 microPET생체영상을 획득하였다. 결과: 합성된 $[^{18}F]FHBG$를 역상 HPLC를 사용하여, 머무름 시간 16-18분에서 분리하였다. 반감기를 고려한 방사화학적 수율은 20-25%, 방사화학적 순도는 95% 이상이었으며 비방사능은 55.0 $GBq/{\mu}\;mol$ 이상이었다. HSV1-tk 유전자가 이입된 MCA-tk 세포에서는 특이적인 $[^{18}F]FHBG$의 집적이 발생하였으며 대조군인 MCA에서는 거의 집적이 이루어지지 않았다. 또한, 방출 실험에서 방출 후 1시간 경과까지 86% 이상의 $[^{18}F]FHBG$가 세포내에 잔류하였다. MCA-tk 세포주의 비율이 증가함에 따라 $[^{18}F]FHBG$의 섭취량도 직선적 상관관계($R^2=0.995$)에 따라 증가하여 기질의 섭취량이 유전자 발현량을 잘 반영하고 있음이 확인되었다. MicroPET을 이용한 생체영상에서도 MCA와 MCA-tk 에서 확연한 집적의 차이를 보여주었다. 결론: 간암세포주에서 HSV1-tk 유전자의 발현 정도와 지속성 그리고 위치를 확인하기 위한 비침습적 PET 영상을 위한 기질로서 $[^{18}F]FHBG$는 매우 유용할 것으로 기대된다.

• 한국연초학회지
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• 제21권1호
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• pp.70-76
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• 1999

KF 116 was TMV resistant tobacco plant and KB 301 was PVY resistant plant transformed with TMV CP gene and PVY CP gene, respectively. These resistant plants were cross-fertilized and the 4 lines of the TMV-PVY resistant plants were selected from F1 hybrid plants. The rate of PVY-resistant plant in these hybrids was 100 percent and that of TMV-resistant plants including delay type was 90-98 percent at 4 weeks after virus inoculation. It was confirmed that the TMV and PVY CP genes were integrated into the genome of hybrid plants by genomic PCR, and Southern blot hybridization. The genome of F1 hybrid plants had one copy and 4 copies of PVY-CP gene and TMV-CP gene, respectively, and CaMV 35S promoters were not methylated, regardless of the difference symptom development to TMV.

• 농업과학연구
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• 제48권1호
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• pp.151-161
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• 2021

Fusarium wilt disease of tomato plants caused by Fusarium oxysporum f.sp. lycopersici (FOL race2) is one of the most important diseases of tomatoes worldwide. In the competition between tomato and FOL, the FOL can win by overcoming the immune system of tomato plants. Resistant interaction between the FOL race2 and tomato plants is controlled by avirulence genes (AVR2) in FOL and the corresponding resistance genes (I2) in tomato plants. In this study, 7 FOL isolates (KACC) were used to test their pathogenicity, and FOL race2 was selected because it is a broad problem in Korea. The Fol40044 isolates showed the most severe pathogenicity, and the avr2 gene was also isolated and identified. Moreover, to select resistance, 20 tomato varieties were inoculated with the Fol40044, and the degree of pathogenicity was evaluated by analyzing the expression of the avr2 gene. As a result, three resistant tomato varieties (PCNUF73, PCNUF101, PCNUF113) were selected, and the expression of the avr2 gene was much lower than that of the control Heinz cultivar. This result shows that the screening assay is very efficient when the avr2 gene is used as a marker to evaluate the expression level when selecting varieties resistant to tomato wilt disease. Based on these results, it is possible to isolate the I2 gene, which exhibits resistance and molecular biological interactions with the AVR2 gene from the three tomato-resistant varieties. The I2 gene provides breeders more opportunities for Fusarium disease resistance and may contribute to our understanding of their interactions with the FOL and host plant.

• Journal of Microbiology and Biotechnology
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• 제21권4호
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• pp.347-358
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• 2011

Fomitopsis palustris, a brown-rot basidiomycete, causes the most destructive type of decay in wooden structures. In spite of its great economic importance, very little information is available at the molecular level regarding its complex decay process. To address this, we generated over 3,000 expressed sequence tags (ESTs) from a cDNA library constructed from F. palustris. Clustering of 3,095 high-quality ESTs resulted in a set of 1,403 putative unigenes comprising 485 contigs and 918 singlets. Homology searches based on BlastX analysis revealed that 78% of the F. palustris unigenes had a significant match to proteins deposited in the nonredundant databases. A subset of F. palustris unigenes showed similarity to the carbohydrateactive enzymes (CAZymes), including a range of glycosyl hydrolase (GH) family proteins. Some of these CAZyme-encoded genes were previously undescribed for F. palustris but predicted to have potential roles in biodegradation of wood. Among them, we identified and characterized a gene (FpCel45A) encoding the GH family 45 endoglucanase. Moreover, we also provided functional classification of 473 (34%) of F. palustris unigenes using the Gene Ontology hierarchy. The annotated EST data sets and related analysis may be useful in providing an initial insight into the genetic background of F. palustris.

• 대한바이러스학회지
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• 제28권3호
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• pp.233-245
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• 1998

The gene encoding F protein of CBP-1 strain, a heat-stable Newcastle disease virus (NDV) isolated from the diseased pheasants in Korea, was characterized by reverse transcription-polymerase chain reaction (RT-PCR), nucleotide and amino acid sequences. Virus RNA was prepared from the chorioallatoic fluid infected with NDV CBP-1 virus and cDNA was amplified by RT-PCR, cloned and sequenced to analyze. The PCR was sensitive as to detect the virus titer above $2^5$ hemagglutination unit. 1.7kb (1,707bp) size of the cDNA was amplified and cloned into BamHI site of pVL1393 Baculo transfer vector. The nucleotide sequences for F protein were determined by dye terminator cyclic sequencing using four pairs of primers, and 553 amino acid sequences were predicted. In comparison of the nucleotide sequence of F gene of CBP-1 with those of other NDV strains, the homology revealed 88.8%, 98.5% and 98.7% with Kyojungwon (KJW), Texas GB and Beaudette C strains, respectively. As the deduced 553 amino acid sequences of F protein of CBP-1 were compared with those of other NDV strains, the homology appeared 89.9%, 98.7% and 98.9% with KJW, Texas GB and Beaudette C strains, respectively. The putative protease cleavage site (112-116) was R-R-Q-K-R, indicating that CBP-1 strain is velogenic type. The amino acid sequences include 6 sites of N-asparagine-linked glycosylation and 13 cysteine residues. These data indicate that the genotype of CBP-1 strain is more closely associated with the strains of Texas GB and Beaudette C than KJW strain.

• Asian-Australasian Journal of Animal Sciences
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• 제28권10호
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• pp.1394-1406
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• 2015

The AT motif-binding factor (ATBF1) not only interacts with protein inhibitor of activated signal transducer and activator of transcription 3 (STAT3) (PIAS3) to suppress STAT3 signaling regulating embryo early development and cell differentiation, but is required for early activation of the pituitary specific transcription factor 1 (Pit1) gene (also known as POU1F1) critically affecting mammalian growth and development. The goal of this study was to detect novel nucleotide variations and haplotypes structure of the ATBF1 gene, as well as to test their associations with growth-related traits in goats. Herein, a total of seven novel single nucleotide polymorphisms (SNPs) (SNP 1-7) within this gene were found in two well-known Chinese native goat breeds. Haplotypes structure analysis demonstrated that there were four haplotypes in Hainan black goat while seventeen haplotypes in Xinong Saanen dairy goat, and both breeds only shared one haplotype (hap1). Association testing revealed that the SNP2, SNP5, SNP6, and SNP7 loci were also found to significantly associate with growth-related traits in goats, respectively. Moreover, one diplotype in Xinong Saanen dairy goats significantly linked to growth related traits. These preliminary findings not only would extend the spectrum of genetic variations of the goat ATBF1 gene, but also would contribute to implementing marker-assisted selection in genetics and breeding in goats.

• International Journal of Industrial Entomology and Biomaterials
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• 제10권2호
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• pp.131-136
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• 2005

Beauveria bassiana F-101, which has high toxicity toward Acantholyda parki as well as Thecodiplosis japonensis, was an isolate to develop an alternative control system against the major forest pests. Up to now, in B. bassiana, only one pr1 gene has been isolated and characterized. Therefore, we here reported the identification of a pr1-like gene, which would be a factor of toxicity from B. bassiana F-101. The oligonucleotides for the amplification of the pr1-like gene, were chosen based on the conserved regions of the subtilisin family enzymes, pr1 genes of B. bassiana and Metarhizium anisopliae, and proteinase K of Tritirachium album. The cloned PCR fragment had 1111 bp including 52 bp intron. The deduced Pr1-like peptide showed a low identity with Pr1s of entomopathogenic fungi such as B. bassiana Pr1 (BbPr1) and M. anisopliae Pr1 (MaPr1) as well as the proteinase K of T. album (TaPrK). Instead, the deduced peptide had a substantially high amino acid sequence identity $(>65\%)$ with the serine proteases of Magnaporthe grisea (MgSPM1) and Podospora anserina (PaPspA). These results, therefore, appear to suggest that the putative Pr1-like peptide of B. bassiana F-101 belongs to the subtilisin-like serine protease family and may be a novel gene.

• Journal of Applied Biological Chemistry
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• 제65권3호
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• pp.159-166
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• 2022

Epicoccum nigrum produces epipyrone A (orevactaene), a yellow polyketide pigment. Its biosynthetic gene cluster was previously characterized in E. nigrum KACC 40642. The YES liquid culture of this strain revealed high-level production of epicoccamide (EPC), with an identity that was determined using liquid chromatography-mass spectrometry analysis and molecular mass search using the SuperNatural database V2 webserver. The production of EPC was further confirmed by compound isolation and nuclear magnetic resonance spectroscopy. EPC is a highly reduced polyketide with tetramic acid and mannosyl moieties. The EPC structure guided us to localize the hypothetical EPC biosynthetic gene cluster (BGC) in E. nigrum ICMP 19927 genome sequence. The BGC contains genes encoding highly reducing (HR)-fungal polyketide synthase (fPKS)-nonribosomal peptide synthetase (NRPS), glycosyltransferase (GT), enoylreductase, cytochrome P450, and N-methyltrasnferase. Targeted inactivation of the HR-fPKS-NRPS and GT genes abolished EPC production, supporting the successful localization of EPC BGC. This study provides a platform to explore the hidden biological activities of EPC, a bolaamphiphilic compound.