• Title/Summary/Keyword: Extraction system

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Sequence driven features for prediction of subcellular localization of proteins

  • Kim, Jong-Kyoung;Bang, Sung-Yang;Choi, Seung-Jin
    • Proceedings of the Korean Society for Bioinformatics Conference
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    • 2005.09a
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    • pp.237-242
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    • 2005
  • Predicting the cellular location of an unknown protein gives a valuable information for inferring the possible function of the protein. For more accurate prediction system, we need a good feature extraction method that transforms the raw sequence data into the numerical feature vector, minimizing information loss. In this paper, we propose new methods of extracting underlying features only from the sequence data by computing pairwise sequence alignment scores. In addition, we use composition based features to improve prediction accuracy. To construct an SVM ensemble from separately trained SVM classifiers, we propose specificity based weighted majority voting. The overall prediction accuracy evaluated by the 5-fold cross-validation reached 88.53% for the eukaryotic animal data set. By comparing the prediction accuracy of various feature extraction methods, we could get the biological insight on the location of targeting information. Our numerical experiments confirm that our new feature extraction methods are very useful for predicting subcellular localization of proteins.

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Lineament Extraction from DEM Using Raindrop Tracing Algorithm

  • Yun, Sang-ho
    • Proceedings of the KSRS Conference
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    • 1999.11a
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    • pp.290-295
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    • 1999
  • Lineament extraction from mountain area often provides valuable geological information. In many cases, the lineaments correspond to a series of continuous large valleys. This paper introduces a new lineament extraction method from Digital Elevation Model (DEM) using Raindrop Tracing Algorithm (RTA). The main advantage of this algorithm over conventional Segment Tracing Algorithm (STA) is that it utilizes DEM directly unlike the STA Which utilizes the shaded relief of DEM. The RTA simulates the real life of raindrops that converge into a large valley. The simulation has been done by sprinkling the randomized raindrops over DEM and counting the number of raindrop path that follows the negative gradient of the DEM. The large counting number indicates the location of a big valley where the raindrops converge. With the help of the counting number array (accumulator array) recording the flowing path information, RTA can produce perfectly unbiased binary image of the lineament.

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Web Information Extraction using HTML Tag Pattern (HTML 태그페턴을 이용한 웹정보추출시스템)

  • Park, Byung-Kwon
    • Proceedings of the Korea Association of Information Systems Conference
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    • 2005.05a
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    • pp.79-92
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    • 2005
  • To query the vast amount of web pages which are available i]l the Internet, it is necessary to extract the encoded information in the web pages for converting it into structured data (e.g. relational data for SQL) or semistructured data (e.g. XML data for XQuery), In this paper, we propose a new web information extraction system, PIES, to convert web information into XML documents. PIES is based on a user-specified target schema and HTML tag pattern descriptions. The web information is extracted by the pattern descriptions and validated by the target schema. We designed a new language to describe extraction rules, and a new regular expression to describe HTML tag patterns. We implemented PIES and applied it to the US patent web site to evaluate its correctness. It successfully extracted more than thousands of US patent data and converted them into XML documents.

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Operation of a supercritical fluid extraction process using a fuzzy expert control system (Fuzzy 전문가 제어계를 이용한 초임계 유체 추출 장치의 운전)

  • 이대욱;이광순
    • 제어로봇시스템학회:학술대회논문집
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    • 1991.10a
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    • pp.669-675
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    • 1991
  • Based on process analysis as well as extensive operation experience, two fuzzy expert control algorithms, for startup and control, are proposed for a supercritical fluid extraction process which has high interacting multivariable structure. In the proposed algorithms, a new simple defuzzification method which only requires four fundamental arithmetic rules is also presented. Through numerical simulations, control performance using the proposed control algorithm is compared with that of a different fuzzy algorithm by an other researcher and that of conventional PID-type controllers which are tuned by well-known optimal criteria. Also, the proposed control algorithm has been tested to the bench scale supercritical fluid extraction process. As a consequence, the proposed fuzzy expert controller has shown fast and robust control performance while the other controllers show sluggish and/or highly oscillatory responses.

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A Study on Energy Extraction from Tidal Currents

  • Hoang, Anh Dung;Yang, Chang-Jo
    • Proceedings of the Korean Society of Marine Engineers Conference
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    • 2011.06a
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    • pp.79-79
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    • 2011
  • The oceans are an untapped resource, capable of making a major contribution to our future energy needs. In the search for a non polluting renewable energy source, there is a push to find an economical way to harness energy from the ocean. Tidal stream is one of ocean energy form that is being investigated as potential source for power generation. Tidal current turbines are therefore designed as conversion machinery to generate power from tidal currents. A study on energy extraction from tidal currents is presented in this paper.

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A Study on MLP Neural Network Architecture and Feature Extraction for Korean Syllable Recognition (한국어 음절 인식을 위한 MLP 신경망 구조 및 특징 추출에 관한 연구)

  • 금지수;이현수
    • Proceedings of the IEEK Conference
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    • 1999.11a
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    • pp.672-675
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    • 1999
  • In this paper, we propose a MLP neural network architecture and feature extraction for Korean syllable recognition. In the proposed syllable recognition system, firstly onset is classified by onset classification neural network. And the results information of onset classification neural network are used for feature selection of imput patterns vector. The feature extraction of Korean syllables is based on sonority. Using the threshold rate separate the syllable. The results of separation are used for feature of onset. nucleus and coda. ETRI's SAMDORI has been used by speech DB. The recognition rate is 96% in the speaker dependent and 93.3% in the speaker independent.

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Similarity based Rotation Invariant Image Retrieval (유사도를 이용한 회전 불변 영상검색)

  • 권동현;장정동;이태홍
    • Proceedings of the IEEK Conference
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    • 1999.11a
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    • pp.581-584
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    • 1999
  • In order to retrieve the rotated image within database by the content based image retrieval system, the algorithms with rotation robustness is usually applied in the procedure of the feature extraction. In that case, it requires much calculation time for feature extraction and much indexed data for feature indexing. Thus. in this paper. we propose the rotation robust algorithm using the block variance of the projected vector. The algorithm does not require additional calculation for feature extraction and is executed within query time by comparing the extracted data. Proposed method can be processed through database including various size of images with shape information and executed with fast response time in implementation.

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SEMI-AUTOMATIC EXTRACTION OF AGRICULTURAL LAND USE AND VEGETATION INFORMATION USING HIGH RESOLUTION SATELLITE IMAGES

  • Lee, Mi-Seon;Kim, Seong-Joon;Shin, Hyoung-Sub;Park, Jong-Hwa
    • Proceedings of the KSRS Conference
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    • 2008.10a
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    • pp.147-150
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    • 2008
  • This study refers to develop a semi-automatic extraction of agricultural land use and vegetation information using high resolution satellite images. Data of IKONOS satellite image (May 25 of 2001) and QuickBird satellite image (May 1 of 2006) which resembles with the spatial resolution and spectral characteristics of KOMPSAT3. The precise agricultural land use classification was tried using ISODATA unsupervised classification technique and the result was compared with on-screen digitizing land use accompanying with field investigation. For the extraction of vegetation information, three crops of paddy, com and red pepper were selected and the spectral characteristics were collected during each growing period using ground spectroradiometer. The vegetation indices viz. RVI, NDVI, ARVI, and SAVI for the crops were evaluated. The evaluation process is under development using the ERDAS IMAGINE Spatial Modeler Tool.

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Construction of Attractor System by Integrity Evaluation of Polyethylene Piping Materials (폴리에틸렌 배관재의 건전성 평가를 위한 어트랙터 시스템의 구축)

  • Taik, Hwang-Yeong;Kyu, Oh-Seung;Won, Yi
    • Proceedings of the KSME Conference
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    • 2001.06a
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    • pp.609-615
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    • 2001
  • This study proposes analysis and evaluation method of time series ultrasonic signal using attractor analysis for fusion joint part of polyethylene piping. Quantitatively characteristics of fusion joint part is analysed features extracted from time series. Trajectory changes in the attractor indicated a substantial difference in fractal characteristics. These differences in characteristics of fusion joint part enables the evaluation of unique characteristics of fusion joint part. In quantitative fractal feature extraction, feature values of 4.291 in the case of debonding and 3.694 in the case of bonding were proposed on the basis of fractal dimensions. In quantitative quadrant feature extraction, 1,306 point in the case of bonding(one quadrant) and 1,209 point(one quadrant) in the case of debonding were proposed on the basis of fractal dimensions. Proposed attractor feature extraction can be used for integrity evaluation of polyethylene piping material which is in case of bonding or debonding.

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A Study on a Searching, Extraction and Approximation-Synthesis of Transition Segment in Continuous Speech (연속음성에서 천이구간의 탐색, 추출, 근사합성에 관한 연구)

  • Lee, Si-U
    • The Transactions of the Korea Information Processing Society
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    • v.7 no.4
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    • pp.1299-1304
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    • 2000
  • In a speed coding system using excitation source of voiced and unvoiced, it would be involved a distortion of speech quality in case coexist with a voiced and an unvoiced consonants in a frame. So, I propose TSIUVC(Transition Segment Including UnVoiced Consonant) searching, extraction ad approximation-synthesis method in order to uncoexistent with a voiced and unvoiced consonants in a frame. This method based on a zerocrossing rate and pitch detector using FIR-STREAK Digital Filter. As a result, the extraction rates of TSIUVC are 84.8% (plosive), 94.9%(fricative), 92.3%(affricative) in female voice, and 88%(plosive), 94.9%(fricative), 92.3%(affricative) in male voice respectively, Also, I obain a high quality approximation-synthesis waveforms within TSIUVC by using frequency information of 0.547kHz below and 2.813kHz above. This method has the capability of being applied to speech coding of low bit rate, speech analysis and speech synthesis.

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