• Journal of Ecology and Environment
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• v.30 no.2
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• pp.179-186
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• 2007

The diversity of spider communities was investigated in the pine forest of Pinus densiflora in Songri-san, where chemical pesticides had been applied to control pine gall midge (Thecodiplosis japonensis). Spider communities were surveyed in four areas: a pesticide-untreated natural forest (area A), a forest with vinyl-covered ground surface (area B), an aldicarb-treated forest (area C) and a forest treated with a systemic pesticide (phosphamidon) (area D). A total of 74 spider species from 17 families were collected from the four survey areas. There were 54 species from 15 families in area A, 27 species from 12 families in area B, 29 species from 9 families in area C and 34 species from 9 families in area D, respectively. The species diversity of spider communities was highest in pesticide-untreated area A, and much lower in the other three areas. The monthly species diversity of spider communities was highest in May and lowest in January. The similarity of the spider communities was highest in areas B and D. The monthly similarity of the spider communities was highest in November and February. The dominant species was Clubiona jucunda (12.71%, N=304 individuals). According to our results, the application of aldicarb and phosphamidon dramatically decreased spider diversity and the number of individuals in the forests. Thus, the application of these two pesticides to natural forests should be restricted, or alternative pesticides need to be developed. Our results also indicated that application of the pesticides should be avoided in May and June when high spider diversity is expected.

• Journal of Environmental Impact Assessment
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• v.32 no.2
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• pp.61-71
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• 2023

As differences in the impact of each species on a spatial scale occur, analysis at the landscape scale is necessary to evaluate the impact of a development project. In previous studies, the Incidence Function Model (IFM) based on meta population theory was used to analyze the impact of species on the environment that changes according to urban development. However, since the model was required at least 10 occupied areas, it is difficult to use it for species that are difficult to monitor such as endangered species. Therefore, we proposed the Incidence Function Model (IFM) using species distribution model to fill the species data. In addition, we reviewed whether the developed model can be used in environmental impact assessment. As a result of the analysis, the minimum occupancy of Prionailurus bengalensis on urban development decreased to 56.5% and the possibility of survival to 28.7%. We confirmed that It rapidly decreased from the reference points of 230 and 70habitats through analysis of the meta-population capacity according to the decrease in the number of habitats. These results can be assessing the environment impact of each species on habitat loss. And it can support decision-making on the minimum number and area of habitat for species protection. This study is expected to be used as basic data for environment impact assessment on before and after development projects and mitigation measures plans, thereby increasing the effectiveness of reduction plans.

• Journal of the Korean Society of Environmental Restoration Technology
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• v.15 no.5
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• pp.129-144
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• 2012

This study was conducted to understand the community characteristics of benthic macroinvertebrates according to Growth Environment at 6 Palustrine Wetlands in a rural area. As growth environment factors, size, water depth, water inlet and water outlet, land-use and water environment was analyzed. Two years' quantitative collection of benthic macroinvertebrate was carried out, and it executed community analysis and ESB index calculation and also carried out twinspan, MDS and correlation analysis. As a result, the collected benthic macroinvertebrate was 1254 individuals with 3 Phylums, 6 Classes, 14 Orders, 35 Families, 52 Genera and 61 Species. Odonata and Coenagreionidae had the highest species and individuals. Dominance Index was 0.252~0.698, Diversity Index was 1.661~2.902, Evenness Index was 0.414~0.724, and Species Richness Index was 1.990~6.224. As a result of community analysis, when correlation analysis was executed, Dominance Index had the opposite tendency with Diversity Index and Evenness Index, which had the same tendency with the previous studies. When ESB Index was calculated, Grade 2 (polluted) had the highest species with 48 species (78.7%). It is determined from the Environmental quality evaluation and saprobity evaluation result according to ESB index that there is a need to revise environmental evaluation system more specifically. As a result of MDS analysis, the subject spots A and D had the highest similarity, and the subject spot E and D had a relatively high similarity. The life environment that is the closest related with species diversity is estimated by the land-use. As for number of Individual, it seems to have the closest relation with inlet, which is to be determined as a characteristics of Palustrine Wetland. Through such investigation, this study is expected to be utilized for various types of habitats including ecological pond and to be utilized for the increase of species diversity in rural areas.

• Journal of the Korean Society of Environmental Restoration Technology
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• v.16 no.4
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• pp.1-14
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• 2013

A species restoration plan requires a process where the first is to thoroughly study the target species, second is to provide them with an onsite reproduction and adaptation period, and finally, third is to release them to their natural habitat. This study focuses on the space planning for target species' successful onsite reproduction and adaptation. For the study, a site planning near Sobaeksan National Park was implemented with Red Fox's behavior and habitat characteristics in mind for its recovery, reproduction, and natural adaptation. During site selection and planning, the basic aim was to incorporate the existing site as much as possible thus reducing the impact on the environment from the recovery plan. In addition, for a stable recovery of the Red Fox population, the site was classified into three different areas : core area, buffer zone, and transition area. Then, the facilities that help Red Fox's reproduction and adaptation such as reproduction center, foraging site, adaptation training center were planned. Under the condition that the site will be off limit to the public, a limited number of paths for monitoring was provided. For the site's vegetation, the existing species were planted as much as possible with the addition of plants that the Red Fox consume. The facilities included as Red Fox's habitat were fox burrows for hiding and ecological ponds for drinking. From this study, the recovery of the endangered fox species is expected as well as the contribution to an effort to increase of awareness toward the biological resources in Korea through Nagoya protocol. Furthermore, it has the potential to change the public's attitude toward endangered species recovery projects through publicizing and providing experience to the national park visitors.

• The Korean Journal of Mycology
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• v.21 no.2
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• pp.146-156
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• 1993

Boletus is a symbiotic ectomycorrhizal flesh fungi forming mycorrhizas with trees of Pinaceae, Fagaceae and Betulaceae. The species in the genus have relatively strong host specificity to enhance the growth of host plants and some of them are flavorful. But Korean rarely consumes these kinds of mushrooms and B. edulis has not been reported in this country. In the genus twenty six species have been reported in Korea, but the number is expected to increase as collection efforts are intensified. Keys to the families of Boletaceae and Strobilomycetaceae, to the genus of Boletaceae and to the species of Boletus were provided based on published keys and the descriptions of species reported in Korea. However, the key to the Boletus species did not include all the species occurring in Korea and not all the ones in the key are indigenous.

• Ecology and Resilient Infrastructure
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• v.9 no.2
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• pp.100-106
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• 2022

The relationships between river length and weir density versus fish species observed were analyzed for 210 local rivers in the Seomjin River system (SJR). A nonlinear exponential relationship between river length and number of fish species were observed. Model coefficient was 0.03 and coefficient of determinant (R²) was 0.59, meaning that about 59.0% of total variance was explained by river length variable. Predicted value by model and observed number of species showed a difference. About 110 local rivers (about 52.4%) showed lower value than predictive value. The average index of weir's density (IWD) in the SJR was about 2.7/km, which was significantly higher than that of other river basins. As a result of nonparametric 2-Kimensional Kolmogorov-Smirnov (2-DKS) analysis based on the IWD, the threshold value affecting fish diversity was about 2.5/km (D_max=0.048, p<0.05). Above the threshold value, it means that the number of fish species would be decreased. In fact, the ratio of the expected species to the observed species was lowered to less than 70%, when the IWD is higher than the threshold value. To maintain aquatic ecological connectivity in future, it is necessary to manage IWD below the threshold value.

• Korean Journal of Plant Taxonomy
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• v.50 no.3
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• pp.327-332
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• 2020

Microsatellite markers were developed as a tool for phylogeographic studies of Hosta capitata. We also assessed cross-amplification in species closely related to Hosta capitata. We produced 28 polymorphic microsatellite markers by mapping 300 bp paired-end reads obtained from Illumina MiSeq data of H. capitata. In H. capitata, the number of alleles per locus ranged from 1 to 13. Observed and expected heterozygosity ranged from 0.000 to 0.844 and 0.000 to 0.832, respectively. Additionally, 13 loci were successfully transferable to the related species of H. minor and H. venusta. These markers will provide a powerful genetic tool not only for elucidating the phylogeographic patterns of H. capitata populations but also for studying the genetic delimitation of H. capitata from its related species.

• Journal of Microbiology and Biotechnology
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• v.16 no.2
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• pp.178-183
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• 2006

Microbes are one of the most important bioresources in bioindustry and provide high economic values. Although there are currently about 6,000 bacterial species with validly published names, microbiologists generally assume that the number may account for less than 1% of the bacterial species present on Earth. To discover the remaining species, studies of metagenomes, metabolomes, and proteomes related to microbes have recently been carried out in various fields. We have constructed an information system that integrates various data on microbial resources and manages bioinformation to support efficient research of microorganisms. We have designated this system 'Bio-Meta Information System (Bio-MIS).' Bio-MIS consists of an integrated microbial resource database, a microbial resource input system, an integrated microbial resource search engine, a microbial resource online distribution system, a portal service, and management via the Internet. In the future, this system is expected to be connected with various public databases. We plan to implement useful bioinformatics software for analyzing microbial genome resources. The Web site is accessible at http://biomis.probionic.com.

• Genomics & Informatics
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• v.21 no.1
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• pp.10.1-10.6
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• 2023

The fishes of the Chiasmodontidae family, known as swallower fishes, are species adapted to live in deep seas. Several studies have shown the proximity of this family to Tetragonuridae and Amarsipidae. However, the phylogenetic position of this clade related to other Pelagiaria groups remains uncertain even when phylogenomic studies are employed. Since the low number of published mitogenomes, our study aimed to assemble six new mitochondrial genomes of Chiasmodontidae from database libraries to expand the discussion regarding the phylogeny of this group within Scombriformes. As expected, the composition and organization of mitogenomes were stable among the analyzed species, although we detected repetitive sequences in the D-loop of species of the genus Kali not seen in Chiasmodon, Dysalotus, and Pseudoscopelus. Our phylogeny incorporating 51 mitogenomes from several families of Scombriformes, including nine chiasmodontids, recovered interfamilial relationships well established in previous studies, including a clade containing Chiasmodontidae, Amarsipidae, and Tetragonuridae. However, phylogenetic relationships between larger clades remain unclear, with disagreements between different phylogenomic studies. We argue that such inconsistencies are not only due to biases and limitations in the data but mainly to complex biological events in the adaptive irradiation of Scombriformes after the Cretaceous-Paleogene extinction event.

• Journal of Plant Biology
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• v.37 no.3
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• pp.277-284
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• 1994

I investigated levels of genetic diversity, population genetic structure, and gene flow in Hostacapitata, a herbaceous perennial native to South Korea and southwestern Japan. Starch gel electrophoresis was conducted on leaves collected from 310 plants in 19 Korean populations. Twenty-two of 25 putative loci examined were polymorphic in at least one populatin and the mean number of alleles per locus was 1.65. In addition, mean expected heterozygosity within populations (Hep=0.153) was higher than average values for species with similar life history traits. Significant differences in allele frequency were detected between populations at all loci (P<0.01), and slightly over 30% of the genetic variation was found among populatins (GST=0.308). Indirect estimates of the number of migrants per generation (Nm) (0.506, calculated from GST; 0.852, calculated from the mean frequency of ten private alleles) indicate that gene flow is restricted among the isolated Korean populations of H. capitata. Factors contributing to the high levels of genetic differentiation among populations of H. capitata include small and discrete populations, human disturbance, and low frequencies of pollinator foraging behavior.