• Title/Summary/Keyword: Equilibrium species

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Development and validation of microsatellite markers for the endangered nerippe fritillary butterfly, Argynnis nerippe (Lepidoptera: Nymphalidae)

  • Jeong, Su Yeon;Kim, Min Jee;Kim, Sung Soo;Kim, Iksoo
    • International Journal of Industrial Entomology and Biomaterials
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    • v.37 no.1
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    • pp.1-8
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    • 2018
  • The nerippe fritillary butterfly, Argynnis nerippe, is listed as an endangered species in Korea. Establishment of effective conservation strategies can be aided by the development and application of molecular markers that can be used to investigate the population genetics of the butterfly. Therefore, in this study, we identified ten microsatellite markers specific to A. nerippe using the Next-Seq 500 platform, and applied these markers to investigate the characteristics of five South Korean butterfly populations. Genotyping of 48 A. nerippe individuals from five localities showed that at each locus the number of alleles ranged from 4 to 14, and that the observed and expected heterozygosities were 0.324-0.863 and 0.138-0.985, respectively. Significant deviation from the Hardy-Weinberg equilibrium was not observed at any locus. Population structure analysis indicated that there are two genetic groups in Korea, but no population-based gene pool assignments were found. Analysis of $F_{ST}$, $R_{ST}$, and a principal coordinates analysis suggested that the Gureopdo and Yaecheon populations were isolated from other populations. Genetic isolation of the Gureopdo population may be a consequence of unequal population change between Gureopdo and inland populations and to the offshore habitat of Gureopdo. Genetic isolation of the Yaecheon population may be a consequence either of the southernmost location of the population or of the limited sample size available. Further studies with increased sample sizes will be necessary to draw robust conclusions on population isolation and to devise conservation strategies.

Development and Characterization of New Microsatellite Markers for the Oyster Mushroom (Pleurotus ostreatus)

  • Ma, Kyung-Ho;Lee, Gi-An;Lee, Sok-Young;Gwag, Jae-Gyun;Kim, Tae-San;Kong, Won-Sik;Seo, Kyoung-In;Lee, Gang-Seob;Park, Yong-Jin
    • Journal of Microbiology and Biotechnology
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    • v.19 no.9
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    • pp.851-857
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    • 2009
  • We developed and characterized 36 polymorphic microsatellite markers for the oyster mushroom (Pleurotus ostreatus). In total, 169 alleles were identified with an average of 4.7 alleles per locus. Values for observed ($H_o$) and expected ($H_E$) heterozygosities ranged from 0.027 to 0.946 and from 0.027 to 0.810, respectively. Nineteen loci deviated from Hardy-Weinberg equilibrium. Significant (P<0.05) excess heterozygosity was observed at nine loci. Linkage disequilibrium (LD) was significant (P<0.05) between pairs of locus alleles. Cluster analysis revealed that five species of genus Pleurotus made a distinct group, and the individual cultivars were grouped into major five groups from G-1 to G-5. The diverse cultivars of P. ostreatus were discriminated and the other four species revealed a different section in the UPGMA tree. These microsatellite markers proved to be very useful tools for genetic studies, including assessment of the diversity and population structure of P. ostreatus.

Genetic Analysis of the Polymorphism of Color Pattern in Drosophila auraria (Drosophila auraria 의 반문다형현상의 유전학적분석)

  • 이택준
    • The Korean Journal of Zoology
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    • v.7 no.2
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    • pp.41-47
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    • 1964
  • D.auraria is a species belonging to the D.melanogaster group, and this species was divided into 3 races(A, B and C race ) by morphoogical difference of the genitals . Korean populations of D.auraria A race are polymorphic with respect to the pigmentation of the abdominal tergites. The female shows two forms of color pattern, dark and light, on the sixth to the ninth tergites, and the male has no distinction shown by the female. Crossing experiments in the laboratory have shown that the difference between these color forms is due to a single pair of allelic genes located on an autosome. In natural populations, the light forms of females are always commoner than the dark one. The number of the light form increases relatively in southern localities and decreases relatively in northern localities. Furthermore, the number of the light form increases relatively in summer and decreases relatively in fall and spring. By genetic analyses of these wild flies, the relation, d/d>d/D>D/D has been disclosed as regards the relative frequencies of the genotypes in natural populations. Three experimental populations have been set up in the laboratory. Homozygous dark forms and homozygous light forms were mixed together and cultured in population cage at the temperature of 25 $^{\circ}C$. Approximately one year later, the frequencies of the light and the dark forms reached an equilibrium , the light one being usually more frequent than the dark one. This indicates that the heterozygous dark form possesses the highest adaptive value, the homozygous light being intermediate and the homozygous dark lowest. In number of adults hached, the homozygous light form was superior to the heterozygous dark form and the homozygous dark form, but the differences are scarcely significant.

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Potential Influence of Climate Change on Shellfish Aquaculture System in the Temperate Region

  • Jo, Qtae;Hur, Young Baek;Cho, Kee Chae;Jeon, Chang Young;Lee, Deok Chan
    • The Korean Journal of Malacology
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    • v.28 no.3
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    • pp.277-291
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    • 2012
  • Aquaculture is challenged by a number of constraints with future efforts towards sustainable production. Global climate change has a potential damage to the sustainability by changing environmental surroundings unfavorably. The damaging parameters identified are water temperature, sea level, surface physical energy, precipitation, solar radiation, ocean acidification, and so on. Of them, temperature, mostly temperature elevation, occupies significant concern among marine ecologists and aquaculturists. Ocean acidification particularly draws shellfish aquaculturists' attention as it alters the marine chemistry, shifting the equilibrium towards more dissolved CO2 and hydrogen ions ($H^+$) and thus influencing signaling pathways on shell formation, immune system, and other biological processes. Temperature elevation by climate change is of double-sidedness: it can be an opportunistic parameter besides being a generally known damaging parameter in aquaculture. It can provide better environments for faster and longer growth for aquaculture species. It is also somehow advantageous for alleviation of aquaculture expansion pressure in a given location by opening a gate for new species and aquaculture zone expansion northward in the northern hemisphere, otherwise unavailable due to temperature limit. But in the science of climate change, the ways of influence on aquaculture are complex and ambiguous, and hence are still hard to identify and quantify. At the same time considerable parts of our knowledge on climate change effects on aquaculture are from the estimates from data of fisheries and agriculture. The consequences may be different from what they really are, particularly in the temperature region. In reality, bivalves and tunicates hung or caged in the longline system are often exposed to temperatures higher than those they encounter in nature, locally driving the farmed shellfish into an upper tolerable temperature extreme. We review recent climate change and following environment changes which can be factors or potential factors affecting shellfish aquaculture production in the temperate region.

Hydrochemical Properties of the Groundwater Used for the Natural Mineral Waters in Precambrian Metamorphic Terrains, Korea (선캄브리아기 변성암지역에 분포하는 먹는 샘물 지하수의 수리화학적 특성)

  • 성익환;추창오;조병욱;이병대;김통권;이인호
    • Journal of the Korean Society of Groundwater Environment
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    • v.5 no.4
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    • pp.203-209
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    • 1998
  • The quality of groundwater used for natural mineral water should be strictly regulated on international level by hydrogeology experts and officials because groundwater is greatly subjected to contaminations and its aquifer system may be easily destroyed by external reasons. A total of 18 natural mineral water plants exist in Precambrian metamorphic terrains of the Gyunggi massif and Yeungam massif. The g개undwater quality for the natural mineral water investigated in hydrochemical aspects shows that pH ranges from 6.85 to 8.02 with an average of 7.52. The electric conductivity (EC) and hardness average 134.1 $\mu$S/cm and 43.5, respectively, which are relatively low to the total average (151.4 $\mu$S/cm and 57.9). The contents of major cations and anions are in the order of $Ca^{2+}$$Na^{+}$>Mg$^{2+}$>K$^{+}$ and HCO$_3$$^{-}$ >SO$_4$$^{2-}$ >Cl$^{-}$ >F$^{-}$ , respectively. The dominant water types determined by Piper diagram are $Ca^{2+}$$Na^{+}$-HCO$^{-}$ $_3$and $Ca^{2+}$-HCO$^{-}$ $_3$, mainly due to the dissolution of plagioclase in the host rocks. Representative correlation coefficients between chemical species are $Ca^{2+}$-HCO$^{-}$ $_3$(0.92), $Ca^{2+}$-Cl$^{-}$ (0.63), $Na^{+}$-F$^{-}$ (0.67), HCO$^{-}$ $_3$-Cl$^{-}$ (0.66), and $Na^{+}$-HCO$^{-}$ $_3$(0.63). The determinative. coefficients between $Ca^{2+}$ and HCO$^{-}$ $_3$, and (Ca$^{2+}$$Na^{+}$+K$^{+}$ and EC art highest among the elements. According to the saturation index, most chemical species are undersaturated with respect to major minerals, except for some silica phases. In viewpoint of phase equilibrium, the chemical evolution of the groundwater may continue to proceed with increasing pH because the groundwater is undersaturated with respect to feldspars.

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Isolation and inheritance of microsatellite loci for the oily bittering (Acheilognathus koreensis): applications for analysis of genetic diversity of wild populations

  • Kim, Woo-Jin;Kong, Hee-Jeong;Shin, Eun-Ha;Kim, Chi-Hong;Kim, Hyung-Soo;Kim, Young-Ok;Nam, Bo-Hye;Kim, Bong-Seok;Lee, Sang-Jun;Jung, Hyung-Taek
    • Animal cells and systems
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    • v.16 no.4
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    • pp.321-328
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    • 2012
  • The oily bittering Acheilognathus koreensis is a freshwater species that is endemic to Korea and is experiencing severe declines in natural populations as a result of habitat fragmentation and water pollution. For the conservation and restoration of this species, it is necessary to assess its genetic diversity at the population level. We developed 13 polymorphic microsatellite loci that were used to analyze the genetic diversity of two populations collected from the Kum River and the Tamjin River in Korea. All loci exhibited Mendelian inheritance patterns when examined in controlled crosses. Both populations revealed high levels of variability, with the number of alleles ranging from 3 to 20 and observed and expected heterozygosities ranging from 0.500 to 0.969 and from 0.529 to 0.938, respectively. None of the loci showed significant deviation from Hardy-Weinberg equilibrium, and one pair of loci showed significant linkage disequilibrium after Bonferroni correction. Pairwise $F_{ST}$ and genetic distance estimation showed significant differences between two populations. These results suggest that the microsatellites developed herein can be used to study the genetic diversity, population structure and conservation measure of A. koreensis.

Isolation and characterization of micro satellite loci in the Korean crayfish, Cambaroides similis and application to natural population analysis

  • Ahn, Dong-Ha;Park, Mi-Hyun;Jung, Jae-Ho;Oh, Mi-Jin;Kim, Sang-Hee;Jung, Jong-Woo;Min, Gi-Sik
    • Animal cells and systems
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    • v.15 no.1
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    • pp.37-43
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    • 2011
  • The Korean freshwater crayfish, Cambaroides similis, has recently suffered from range reduction and habitat degradation caused by environmental changes and water pollution. For the conservation and restoration of this species, it is necessary to understand the current population structures of Korean C. similis using estimation of their genetic variation. In this study, eight micro satellite loci were developed and characterized from 49 individuals collected from four locations: one population from Mt. Bukhan (BH) and three populations from Mt. Gwanak (GA) in Seoul, Korea. As a result, the number of alleles per locus ranged from 2 to 12. The observed heterozygosities and expected heterozygosities ranged from 0.000 to 0.833 and from 0.125 to 0.943, respectively, and the former values were significantly lower than the latter ones expected under the Hardy-Weinberg equilibrium. No significant linkage disequilibrium was revealed between any of the locus pairs after Bonferroni correction. From the pairwise Fst results over all samples, higher differentiation between GA-BH population pairs (mean 0.1789) was observed than between GA population pairs (mean 0.0454). This was also supported by Mantel's test showing that the genetic distances of these crayfish populations were significantly correlated with geographic distances. This result may show the regional differentiation caused by restricted gene flow between northern (BH) and southern (GA) populations within Seoul. These micro satellite markers have the potential for use in analyses of the genetic diversity and population structure of C. similis species, with implications for its conservation and management plans.

A Study on the Sol-Gel Reaction Kinetics of Sodium Silicate Solution (규산(硅酸)나트륨 수용액(水溶液)의 솔-젤 반응속도론적(反應速度論的) 고찰(考察))

  • Kim, Chul-Joo;Yoon, Ho-Sung;Jang, Hee-Dong
    • Resources Recycling
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    • v.17 no.6
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    • pp.34-42
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    • 2008
  • The properties of sodium silicate solution were surveyed by using the yellow silicomolybdic method, and the formation of silica sol from sodium silicate solution and the growth of silica sol were investigated in this study. The $SiO_2$ content of 2 wt% in sodium silicate solution was proper to oxidize sodium silicate with sulfuric acid. After the removal of sodium ions in sodium silicate solution, the pH of silicate solution had to be controlled above 9 for the stabilization of silicate solution. The condensation between silicic acid species and silica nuclei surfaces has been studied at $20{\sim}80^{\circ}C$ and pH 10 in silicate solutions with silica nuclei. The reaction falls into two kinetics regimes, limited at high silicic acid species concentration by polymerization, but at lower concentration by a process whereby deposited silicic acid species condenses further to silica. The overall condensation is first-order in silicic acid species concentration, proceeded toward to pseudo equilibrium concentration, $C_x$, rather than the solubility of amorphous silica. The heat of solution of amorphous silica was 3.34 kcal/mol and exhibits an Arrhenius temperature dependence with an apparent activation energy of 3.16 kcal/mol in the range of $20{\sim}80^{\circ}C$.

Biosorption and Development of Biosorbent by using Seaweed, Sugassum thunbergii (해조류, Sargassum thunbergii를 이용한 중금속의 바이오 흡착제의 개발)

  • SUH Kuen-Hack;LEE Hak-Sung;SUH Jung-Ho
    • Korean Journal of Fisheries and Aquatic Sciences
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    • v.33 no.1
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    • pp.60-65
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    • 2000
  • Biosorptions of Cr and Pb were evaluated for 23 species of marine algae collected from a Korean coast. Among a variety of species for biosorbent potential, Sargassum species showed higher uptake capacity for Cr and Pb. An adsorption equilibrium was reached in about 1 hr for Cr and 30 min for Pb. The maximum uptake capacity was136.0 mg Cr/g biomass and 232.5 mg Pb/g biomass, respectively. In Pb biosorption in the column packed with Sargassum tbunbertii, 300 and 200 bed Tolumes at the concentration of 50 mg/L in feed solution were processed at the column residence time of 5 and 10 min before the column breakthrough point occurred. The elutions with 0.1 M HCl solution were more than $95{\%}$. The high efficiency of continous biesorntion and elution (3 cycles) indicated that Sargassum thunbergii was an effective biosorbent for Pb recovery.

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Analysis of Successional Trend by Transition Matrix Model in the Mixed Broadleaved-Abies Forest of Mt. Odae (추이행렬(推移行列) 모델에 의한 오대산(五臺山) 활엽수(闊葉樹)-젓나무속(屬) 혼효림(混淆林)의 천이(遷移) 경향(傾向) 분석(分析))

  • Kim, Ji Hong
    • Journal of Korean Society of Forest Science
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    • v.81 no.4
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    • pp.325-336
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    • 1992
  • The successional status and potential natural vegetation were examined in a mixed broadleaved-Abies forest located at Mt, Odae National Park. The examination was based on the subsequent process of generation replacement by understory saplings for the dominant canopy trees within 88 $5m{\times}50m$ belt transects. The transition matrix model, which was modified from mathematical theory of Markov chain, was employed to analyze the successional status of the study forest. The model suggests that the study forest is still seral, and it is considered to be more than 700 years away from the steady state or climax in terms of species composition. The simulations predict a remarkable decrease in the proportion of species composition of the present dominant Quercus mongolica and Tilia amurensi.s from current 28% and 13% to less than 3% and 5%, respectively, at the steady state. On the contrary, the proportions of Abies holophylla, Acer pseudo-sieboldianum, Carpinus cordata, and Pinus koraiensis will increase at the steady state. The ratio of mixture between deciduous and coniferous trees will be gradually changed from current 6.5 : 3.5 to 5.0 : 5.0 at equilibrium. Discussion for the problems of Quercus mongolica in successional status noted that the species behaved as a mid-successional dominant, not a climax species in the study forest. The hypothesis and sensitivity of the transition matrix model were also discussed to evaluate the applicability to the real situation. The overall results indicated that the present dynamics of the forest must reflect the seral state due to previous disturbance mainly by hyman related interference.

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