• Title/Summary/Keyword: Diversity Component

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Variation for Morphological Characters in Cultivated and Weedy Types of Perilla frutescens Britt. Germplasm

  • Luitel, Binod Prasad;Ko, Ho-Cheol;Hur, On-Sook;Rhee, Ju-Hee;Baek, Hyung-Jin;Ryu, Kyoung-Yul;Sung, Jung-Sook
    • Korean Journal of Plant Resources
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    • v.30 no.3
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    • pp.298-310
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    • 2017
  • Morphological variation between cultivated and weedy types of Perilla frutescens var. frutescens and P. frutescens var. crispa were studied in 327 germplasm by examining 17 morphological characters. The germplasm between the two varieties were varied for their qualitative and quantitative characters. The seed coat color of cultivated P. frutescens var. frutescens is commonly light brown and brown while deep brown color was observed in the weedy type P. frutescens var. frutescens and P. frutescens var. crispa. The leaf size, cluster length, plant height, flower number per cluster and seed weight in cultivated P. frutescens var. frutescens were significantly (P<0.05) different from weedy type P. frutescens var. frutescens and P. frutescens var. crispa. The cultivated P. frutescens var. frutescens exhibited significantly higher plant height (158.6 cm) compared to the weedy P. frutescens var. crispa (133.8 cm). Likewise, seed weight was significantly higher in cultivated (1.9 g) than in the weedy type of P. frutescens var. frutescens (1.6 g) and P. frutescens var. crispa (1.4 g). Principal component analysis (PCA) result showed that the first and second principal component cumulatively explained 86.6% of the total variation. The cultivated type P. frutescens var. frutescens and its weedy accessions were not clearly separated with P. frutescens var. crispa by PCA. Hence it requires the use of molecular markers for better understanding of their genetic diversity.

Comparison and Validation of Genetic Diversity and Population Structure Using Monomorphic SNP Data of the Korean Native Black Goat and Crossbred Goat (재래흑염소와 교잡종 염소의 Monomorphic SNP 분석을 통한 유전적 다양성과 집단구조의 비교 및 검증)

  • Kim, Kwan-Woo;Lee, Jinwook;Lee, Eun-Do;Lee, Sung-Soo;Choi, You-Lim;Lim, Hyun-Tae;Kim, Yousam;Lee, Sang-Hoon
    • Journal of Life Science
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    • v.30 no.11
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    • pp.1007-1011
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    • 2020
  • This study was conducted to analyze the genetic diversity and relationships that discriminate between Korean native black goat populations (Dangjin, Jangsu, Tongyoung, and Gyeongsang National University strains) and crossbred goats. Monomorphic single nucleotide polymorphisms (SNPs) in each strain were collected, and 133 common SNPs were selected for analysis. These 133 monomorphic SNPs showed differences in the genetic structure of the Korean native black goat and crossbred goats, and results from the principal component analysis (PCA) showed that the two can be clearly separated. Furthermore, analysis of the validation population comprising 70 individuals (Korean native black goats, n = 24; crossbred goats, n = 46) with the reference population showed that Korean native black goat strains and the reference population have the same genetic structure, and the crossbred goats shared only part of the genetic structure with the reference population. The result of the PCA analysis showed that the Korean native black goat strains form one population, whereas the foreign strains form another population which is more widely dispersed than the Korean native black goat strains. Thus, the results from this study can be used as baseline data for the conservation of genetic resources of Korean native black goat communities through utilization of monomorphic SNPs and for the introduction of exotic species for further improvement in genetic diversity. This study can also help reduce unnecessary inbreeding and gene flow between native strains.

Analysis of diversity of hemolytic microbiome from aquafarm of arkshell, Scapharca broughtonii (피조개 양식장 내 용혈성 미생물의 다양성 분석)

  • Gwon, Byeong-Geun;Kim, Young-Ok;Nam, Bo-Hye;Kim, Woo-Jin;Kong, Hee Jeong;Kim, Bong-Seok;Jee, Young-Ju;Lee, Sang-Jun;An, Cheul Min;Kim, Dong-Gyun
    • Journal of fish pathology
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    • v.26 no.3
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    • pp.193-206
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    • 2013
  • The ark shell, Scapharca broughtonii is a marine bivalve mollusks belonging to the family Arcidae and important seafood for Korean and Japanese, and southern coast is brisk bays for the ark shell aquaculture. However, productivity of ark shell from these regions were rapidly reduced during the last decade due to mass mortality. The reason of this great damage has not yet been identified. To overcome this economic loss, diverse investigations were focused on environmental factors that affects in the physiology of S. broughtonii, but microbiological researches were performed insufficiently. Hemoglobin is one of the major blood component of ark shell and is damaged by some species of bacterial toxins. We concentrated on this red pigment because hemolysis could be the cause of ark shell mortality. In this study, we analyzed microbial diversity of underwater sediments in coastal regions and also existences in the body of S. broughtonii. We investigate about 4,200 isolates collected from June to September for microbial diversity of sediments and ark shell. We screened all of culturable microorganisms, and identified 25 genera 118 species, 24 genera 89 species, 30 genera 109 species and 39 genera 141 species, and selected 140 unique colonies for identification and challenge assay.

High-density single nucleotide polymorphism chip-based conservation genetic analysis of indigenous pig breeds from Shandong Province, China

  • Wang, Yanping;Zhao, Xueyan;Wang, Cheng;Wang, Wenwen;Zhang, Qin;Wu, Ying;Wang, Jiying
    • Animal Bioscience
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    • v.34 no.7
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    • pp.1123-1133
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    • 2021
  • Objective: Shandong indigenous pig breeds are important Chinese pig resources. Their progressive population decline in recent decades has attracted attention towards their conservation. Conservation genetics of these indigenous breeds are essential for developing a conservation and utilization scheme. Methods: A high-density single nucleotide polymorphism (HD-SNP) chip-based comparative analysis of genetic characteristics was performed for seven Shandong indigenous pig breeds in the context of five Western commercial breeds. Results: The results showed that Shandong indigenous pig breeds varied greatly in genetic diversity, effective population size, inbreeding level, and genetic distance with the Western commercial breeds. Specifically, Laiwu and Dapulian displayed low genetic diversity, and had a genetically distant relationship with the Western commercial breeds (average F statistics [FST] value of 0.3226 and 0.2666, respectively). Contrastingly, the other five breeds (Yantai, Licha, Yimeng, Wulain, and Heigai) displayed high genetic diversity within breed and had some extent of mixture pattern with the Western commercial breeds, especially Duroc and Landrace (FST values from 0.1043 to 0.2536). Furthermore, intensive gene flow was discovered among the seven Shandong indigenous breeds, particularly Wulian, Licha, and Heigai, as indicated by the large cluster formed in the principal component analysis scatterplot and small population differentiation (average of 0.1253) among them. Conclusion: Our study advances the understanding of genetic characteristics of Shandong indigenous breeds and provides essential information for developing an appropriate conservation and utilization scheme for these breeds.

Multivariate Characterization of Common and Durum Wheat Collections Grown in Korea using Agro-Morphological Traits

  • Young-ah Jeon;Sun-Hwa Kwak;Yu-Mi Choi;Hyemyeong Yoon;Myoung-Jae Shin;Ho-Sun Cheon;Sieun Choi;Youngjun Mo;Chon-Sik Kang;Kebede Taye Desta
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.68 no.4
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    • pp.343-370
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    • 2023
  • Developing improved wheat varieties is vital for global food security to meet the rising demand for food. Therefore, assessing the genetic diversity across wheat genotypes is crucial. This study examined the diversity of 168 durum wheat and 47 common wheat collections from 54 different countries using twelve agro-morphological parameters. Geumgang, a prominent Korean common wheat variety, was used as a control. Both qualitative and quantitative agronomical characteristics showed wide variations. Most durum wheats were shown to possess dense spikes (90%), while common wheats showed dense (40%) or loose (38%) spikes, with yellowish-white being the dominant spike color. The majority of the accessions were awned regardless of wheat type, yellowish-white being the main awn color. White or red kernels were produced, with white kernels dominating in both common (74%) and durum (79%) wheats. Days to heading (DH) and days to maturity (DM) were in the ranges of 166-215 and 208-250 days, respectively, while the culm length (CL), spike length (SL), and awn length (AL) were in the ranges of 53.67-163, 5.33-18.67, and 0.50-19.00 cm, respectively. Durum wheats possessed the shortest average DH, DM, and SL, while common wheat had the longest CL and AL (p < 0.05). Common wheats also exhibited the highest average one-thousand-kernel weight. Hierarchical cluster analysis, aided by principal component analysis, grouped the population into seven clusters with significant differences in their quantitative variables (p < 0.05). In conclusion, this research revealed diversity among common and durum wheat genotypes. Notably, 26 durum wheat and 17 common wheat accessions outperformed the control, offering the potential for developing early-maturing, high-yielding, and lodging-resistant wheat varieties.

An Efficient Adaptive Polarimetric Processor with an Embedded CFAR

  • Park, Hyung-Rae;Kwag, Young-Kil;Wang, Hong
    • ETRI Journal
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    • v.25 no.3
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    • pp.171-178
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    • 2003
  • To improve the detection performance of surveillance radars with polarization diversity, we developed an adaptive polarimetric processor and compared it with other polarimetric processors. We derived our adaptive polarimetric processor, called the polarization discontinuity detector (PDD), from the generalized likelihood ratio (GLR) test principle for the unspecified target component. We derived closed-form expressions of its probabilities of detection and false alarm, and compared its performance to that of the adaptive polarization canceller (APC) and Kelly's GLR processor. The PDD had a performance similar to Kelly's GLR in Gaussian clutter, and both the PDD and Kelly's GLR, which have embedded constant false alarm rates (CFARs), outperformed the APC, especially when the target polarization state was close to the clutter's polarization state. The important difference is that the PDD is much simpler than Kelly's GLR for hardware/software implementation, because the PDD does not require a costly two-parameter filter bank to cover the unknown target polarization state as Kelly's GLR does.

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A Study on the Track & Trace System for e-Logistics

  • Lee, Hae-Won;Lee, Yong-Joon;Kim, Hye-Kyu;Park, Jae-Eon;Ha, Soo-Cheol;Seong, Hae-Kyung
    • Proceedings of the IEEK Conference
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    • 2002.07a
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    • pp.458-461
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    • 2002
  • The consumer in the 21$\^$st/ century e-business era is developing a taste fur greater professionalism diversity, internationalism and large-scale integration of his or her demands. With these changes in the consumers preferences in mind, e-businesses need to develop a real time track and trace system to accommodate their logistical and consumer service operations. This research paper discusses the development of a object-oriented logistics tracking database system and a web service tracking component necessary to efficiently store and manage the movements of postal goods and provide real time information on logistics trading.

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W-CDMA Systems Using Turbo Code over Wideband Multipath Channel (광대역 다중경로 채널에서 터보부호를 적용한 W-CDMA 시스템의 성능 분석)

  • 윤성재;조성철;김철성
    • Proceedings of the IEEK Conference
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    • 2000.09a
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    • pp.41-46
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    • 2000
  • In this paper, we analyze the performance of W-CDMA systems using turbo code in the wideband multipath channel. The strength of each multipath component is assumed to be Rayleigh distributed. Turbo codes of long block sizes have been known to show very good performance in a AWGN channel. Recently, turbo codes of short block sizes suitable for real time communication systems have attracted a lot of attention. Thus, in this paper we consider the turbo code of 1/3 code rate and short frame size of 192 bits in wideband mobile multipath channel. We analyze the performance of W-CDMA systems with 10MHz bandwidths in the case of employing RAKE receiver with not only MRC diversity but also turbo code.

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A Repetitive Secretory Protein Gene of A Novel Type in Hydropsyche sp. Is Specially Expressed in the Silk Gland

  • Eun, Jai-Hoon;Goo, Tae-Won;Park, Kwang-Ho;Yun, Eun-Young;Hwang, Jae-Sam;Kang, Seok-Woo;Han, Sung-Sik
    • Proceedings of the Korean Society of Sericultural Science Conference
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    • 2003.10a
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    • pp.153-154
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    • 2003
  • Trichoptera, or caddisflies, comprise one of the major aquatic insect orders. Like Lepidoptera, caddisflies are capable of spinning silk from specially modified salivary glands, and the diversity of ways this silk is used probably accounts for the success of the order as a whole. These utilize silk to construct both larval and pupal shelters, often incorporating materials from the environmental among the silk thread. In this study, we try to find and characterize novel type genes that should be translated to major component protein of aquatic silk. (omitted)

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A Comparison Study on the Evaluating Methods of Component Commonality in a Product Family (Product Family의 부품공통성 평가방법의 비교연구)

  • Seo, Kwang-Kyu
    • Journal of Korean Society of Industrial and Systems Engineering
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    • v.33 no.4
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    • pp.23-27
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    • 2010
  • 고객의 요구에 대한 빠른 대응과 유연하고 효율적으로 새로운 제품을 적기에 개발하기 위해서는 제품 플랫폼에 기초한 대량 맞춤이 절실히 요구된다. 이러한 목적을 달성하기 위하여 기업들은 상대적으로 생산비용을 낮게 유지하면서 대량생산의 이점을 유지하고 동시에 고객의 요구사항을 만족시키기 위해, product family를 도입하고 가능하면 작은 변화를 통하여 제품의 다양성을 유지하고자 한다. Product family를 설계할 때 중요한 이슈는 제품의 공통성과 차별성간의 절충점을 어떻게 찾아낼 것인가인데, 이를 위하여 개발된 것이 product family내에서 평가하는 방법이다. 본 연구에서는 product family의 공통성을 평가하기 위해 개발된 대표적인 7가지의 방법을 여러가지 측면에서 비교분석한다. 이를 위하여 두 개 회사의 컴퓨터 마우스 제품군을 대상으로 공통성 평가를 위한 비교연구를 수행하였다. 추가적으로 본 연구에서는 product family를 설계하거나 재설계할 때 공통성 평가지 수의 효과적이고 효율적인 사용방안을 위한 전략도 제시하였다.