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Using the PubAnnotation ecosystem to perform agile text mining on Genomics & Informatics: a tutorial review

  • Nam, Hee-Jo;Yamada, Ryota;Park, Hyun-Seok
    • Genomics & Informatics
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    • v.18 no.2
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    • pp.13.1-13.6
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    • 2020
  • The prototype version of the full-text corpus of Genomics & Informatics has recently been archived in a GitHub repository. The full-text publications of volumes 10 through 17 are also directly downloadable from PubMed Central (PMC) as XML files. During the Biomedical Linked Annotation Hackathon 6 (BLAH6), we experimented with converting, annotating, and updating 301 PMC full-text articles of Genomics & Informatics using PubAnnotation, a system that provides a convenient way to add PMC publications based on PMCID. Thus, this review aims to provide a tutorial overview of practicing the iterative task of named entity recognition with the PubAnnotation/PubDictionaries/TextAE ecosystem. We also describe developing a conversion tool between the Genia tagger output and the JSON format of PubAnnotation during the hackathon.

Development of Air Supply System for Fuel Cell Electric Bus (연료전지 버스용 공기공급시스템 개발)

  • Kim, Woo-June;Park, Chang-Ho;Cho, Kyung-Seok;Oh, Chang-Hoon
    • 한국신재생에너지학회:학술대회논문집
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    • 2007.06a
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    • pp.561-564
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    • 2007
  • FCEV uses electric energy which generated from the reaction between Hydrogen and Oxygen in fuel cell stack as driving force. As fossil fuels are exhausted, fuel cell is regarded as a potent substitute for next generation energy source, and thus, most of car-makers make every efforts to develop fuel cell electric vehicle (FCEV). In addition, fuel cell is also beneficial in aspect of environment, because only clean water is produced during chemical reaction process instead of harmful exhausted gas. Generally, Hydrogen is supplied from high-pressured fuel tank, and air blower (or compressor) supply Oxygen by pressurizing ambient air. Air blower which is driven by high speed motor consumes about $7{\sim}8$ % of energy generated from fuel cell stack. Therefore, the efficiency of an air blower is directly linked with the performance of FCEV. This study will present the development process of an air blower and its consisting parts respectively.

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Development of Air Supply System for FCEV Bus (연료전지 버스용 공기공급시스템 개발)

  • Park, Chang-Ho;Cho, Kyung-Seok;Kim, Woo-June;Oh, Chang-Hoon
    • 한국신재생에너지학회:학술대회논문집
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    • 2006.11a
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    • pp.417-420
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    • 2006
  • FCEV uses electric energy generated from the reaction between Hydrogen and Oxygen in fuel cell stack as driving force. As fossil fuels are exhausted, fuel cell is regarded as a potent substitute for next generation energy source, and thus, most of car-makers make every efforts to develop fuel cell electric vehicle (FCEV). In addition, fuel cell is also beneficial in aspect of environment, because only clean water is produced during chemical reaction process instead of harmful exhausted gas. Generally, Hydrogen is supplied from high-pressured fuel tank, and air blower (or compressor) supplies Oxygen by pressurizing ambient air. Air blower which is driven by high speed motor consumes about $7{\sim}8%$ of energy generated from fuel cell stack. Therefore, the efficiency of an air blower is directly linked with the overall performance of FCEV. This study will present developing process of an air blower and its consisting parts respectively.

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Development of a Daily Electricity Business Index by using the Electricity Daily Data of the Manufacturing Sector (제조업 일별 전력 사용량을 활용한 일일전력경기지수(DEBI) 개발)

  • Oh, Seunghwan;Park, Sungkeun
    • Journal of the Korean Operations Research and Management Science Society
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    • v.41 no.3
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    • pp.59-74
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    • 2016
  • Electricity sales are directly measured from individual consumers, which could minimize the time gap between data collection and public announcement. Furthermore, industrial electricity sales are highly linked with production and output. Therefore, industrial electricity consumption can be used to track production and output in real time. By using the high-frequency data of industrial electricity sales, this study develops the daily electricity business index (DEBI) to capture the daily economic status. The steps used to formulate DEBI are as follows: (1)selection of the explanatory variables and period, (2) amendment of the seasonal adjustment to eliminate daily temperature and effective day effects, (3) estimation of the weighted value via variables by using PCA, (4) calculation of DEBI and commencement of validation tests. Our empirical analysis and the Hodrick-Prescott filter analysis show that DEBI is highly related to existing economic indices.

The Effects of Family Climate, Peer Support and Self-Esteem on Children's Self-Regulation (가정분위기 및 또래지지와 자아존중감이 아동의 자기조절능력에 미치는 영향)

  • Jung, Hee-Sun;Park, Seong-Yeon
    • Korean Journal of Child Studies
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    • v.31 no.1
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    • pp.19-33
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    • 2010
  • This study examined the effects of family climate, peer support and self-esteem on children's self-regulation. The participants in this study were 369 children (M=11.78 year) who completed questionnaires regarding family climate, peer support, self-esteem and self-regulation. Data were analyzed means by of a Structural equation model using AMOS 7.0. Our results indicated that (1) family climate, peer support and self-esteem were directly linked with children's self-regulation (2) the associations between family climate or peer support and children's self-regulation were mediated by children's self-esteem. These results imply that family climate and peer support are important antecedent variables in predicting children's self-regulation as well as their relative levels of self-esteem.

Driving Mechanism Design of a Motorized Seat Belt Retractor (모터구동형 안전벨트 리트랙터의 구동 메커니즘 설계)

  • Tak, Tae-Oh;Park, Jae-Soon;Kuk, Min-Gu;Kim, Dae-Hee;Sin, Seong-Eon;Choi, Seok
    • Journal of Industrial Technology
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    • v.26 no.A
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    • pp.55-61
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    • 2006
  • Motorized retractors enhance the safety of passengers by removing the slack of webbing and by holding upright driving position. Reliability of a driving mechanism that includes one-way clutch between the driving motor and webbing is directly linked to the safety of passenger. In this research, conditions for locking one-way clutch, and also conditions for sustaining locking are theoretically investigated. The operation of a motorized retractor under realistic conditions is simulated in order to validate the proposed retractor design.

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Study on the Exposed Concrete Construction Formwork According to Attachment Materials (거푸집 붙임재료에 따른 노출콘크리트 시공에 관한 연구)

  • Park, Se-Jun;Lee, Yun-Suk;Lee, Young-Do
    • Proceedings of the Korean Institute of Building Construction Conference
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    • 2016.05a
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    • pp.223-224
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    • 2016
  • Recent local advantages to improve the aesthetics of building materials connected with one of the trend of Exposed Concrete and Construction Method in various facilities and to diversify Showing a tendency to both application and development. This exposed concrete form of the features and materials is, the impact of large commercial viability and can consider I can apply to the surface of construction on a surface The diversification of the material was soon exposed directly linked to the varying aesthetics of concrete, and currently take advantage of the form of material is based on such important factor in our country Based on the concept of Exposed Concrete utilized by some construction site, design and be considered is very important elements of the put to practical use.

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How Do We Manage the Information Security Workforce of the Administrative Agencies? (행정기관의 정보보호 담당인력을 어떻게 관리할 것인가?)

  • Jun, Hyo-Jung;Kim, Tae-Sung;Park, Ki Tae
    • Journal of Information Technology Services
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    • v.18 no.4
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    • pp.55-66
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    • 2019
  • The career development of information security workforce affiliated in administrative department is very different from workforce affiliated in private companies. Their career development attempts are made not by voluntary motivation but by involuntary job movement by the principle of internal relocation. So they are not directly linked to monetary compensation or advancement. Due to the nature of the organization, their work attitude is very passive and there is little intention to turnover. They do not need professionalism, but they must be retrained according to the law. In this paper, we investigate and analyze the roles and responsibilities of information security workforce of each administrative department. And we do questionnaire survey to find out current roles and responsibilities of them will not affect the demand for retraining. Through these research, we would like to discuss how to manage information security workforce affiliated in administrative departments.

Interleukin-17 in the Inflammatory Bowel Disease (Interleukin-17의 발현이 염증성장질환의 발생과 진행에 끼치는 영향)

  • Lee, Cho-Rong;Park, Sung-Gyoo
    • Hanyang Medical Reviews
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    • v.33 no.1
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    • pp.27-32
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    • 2013
  • Inflammatory bowel diseases(IBD), including Crohn's disease and ulcerative colitis, are chronic inflammatory states of the intestinal tract. While the exact mechanisms inducing chronic inflammation are still unclear, it is hypothesized that the inflammation is caused in part by an inappropriate immune response to the intestinal microflora. Although inflammatory diseases are not directly linked to patient survival, symptoms of these diseases significantly decrease quality of life. The incidence rate is higher in western people than eastern people, but the incidence rate of IBD in eastern people, including Korean, is increasing. Recently, it has been reported that IL-17 is an important factor that appears to be involved in IBD induction and progression. This report reviews many recent papers reporting the relationship between IBD and IL-17, which may provide an understanding leading to new means of prevention and treatment for IBD.

On the Analysis of Container Physical Distribution System in Pusan Port (부산항 컨테이너 물류 시스템 분석에 관하여)

  • Park, Chang-Ho;Lee, Cheol-Yeong
    • Journal of Korean Port Research
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    • v.5 no.1
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    • pp.55-69
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    • 1991
  • A Container terminal is a physical link between the ocean and land modes of transport and a major component of the container physical distribution system. A number of projects to increase terminal productivity in the world were found to be tied directly to increasing the efficiency of the intermodal activities, that is, to improving the physical distribution process. This is an indication that the productivity of container terminal is being considered withing a system prospective. The purpose of this study is to establish a model of the container physical distribution system for Pusan port linked with 4 sub-systems including Navigational aids system, Cargo handling/transfer/storage system on dock, Off-dock CY system and In-land transport connection system. and to analyze the system. From this analysis, we found that the system had three bottlenecks on the container physical distribution process in Pusan port : a) cargo handling b) storage and c) inland transport, and showed a way to improve the system.

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