• Title/Summary/Keyword: Diallel analysis

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Genetic Analysis of Shattering Habit and Some Quantitative Characters in Sesame (참깨의 탈립성 및 앙적형질에 대한 유전분석)

  • Kim, Dong-Hwi;Kang, Chul-Whan;Shim, Kang-Bo;Park, Chang-Hwan;Lee, Sung-Woo
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.52 no.2
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    • pp.198-203
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    • 2007
  • This study was carried out to obtain basic informations for gene action of quantitative characters including shattering resistance. The parental varieties used for $5{\times}5$ half diallel crosses were 'Yangbaek' and 'Ansan' of normal type, 'Suwon177' and 'Suwon195' of placenta adhesion type (PA) and 'SIG960320-5-1-1' of indehiscent type (ID). PA and ID type are shattering-resistant sesames, and Yangbaek and Ansan are shattering sesames. All the characters were sufficient to the assumption for diallel analysis in this experiment. Over dominance was exhibited by the number of capsules per plant, while partial dominance by plant height, capsule setting stem length, grain yield per plant and shattering rate, complete dominance by the number of branches per plant. Additive effect was higher than dominance in shattering rate. High shattering rate was dominant over low shattering rate. Suwon 195, shattering resistant sesame, showed to have the many recessive genes which reduced the shattering rate of sesame seed. Broad sense heritability for all the characters was more than 0.8. Narrow sense heritability for the number of branches per plant, the number of capsules per plant, grain yield per plant and shattering rate was 0.45 to 0.63, and plant height and capsule setting stem length was more than 0.8.

Genetic Analysis of Quantitative Characters by Diallel Cross in Cotton (목화의 F2잡종집단에 대한 유전분석)

  • 정원복
    • Journal of Life Science
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    • v.12 no.2
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    • pp.213-218
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    • 2002
  • The experiment was conducted to get basic information for cotton breeding program through four-variety diallel cross population. Additive, dominant, maternal, and reciprocal effect were observed significantly for days to maturity. Based on the Vr-Wr graphical analysis, the characters, number of bolls per plant, boll weight, seed and lint weight per boll, lint weight per boll, width of seed, 100-seed weight, days to flowering, and days to maturity were found to inherit incomplete dominance, and the characters of number of bolls per plant, width of seed, number of seeds per boll, and length of seed were assumed to inherit over dominance. The component of genetic variance analysis for boll weight, seed and lint weight per boll, lint weight per boll, number of seeds per boll, length of seed, and days to flowering showed that additive effects were higher than dominant effects. The narrow-sense heritability(h$_2$N) for boll weight, seed and lint weight per boll, lint weight per boll, days to flowering, and days to maturity showed high values as more than 43.19%. The estimate of broad-sense heritability(h$_2$B) value was higher than that of h$_2$N because of the low importance of dominance effects.

Genetic Analysis of Growth Response to Cold Water Irrigation in Rice

  • Han, Long-Zhi;Koh, Hee-Jong
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.45 no.1
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    • pp.26-31
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    • 2000
  • This study was carried out to obtain the basic information for breeding cold-tolerant rice varieties with high yield-productivity through wide crosses between indica and japonica rice. Genetic analysis was conducted using 55 F$_1$s obtained from half-diallel crosses among eleven cultivars of various origin including indica and japonica rice. Screening for cold tolerance was done with cold-water irrigation after transplanting until ripening stage. Both general combining ability (GCA) and specific combining ability (SCA) effects were highly significant in all characters associated with dry matter accumulation at 30 and 50days after cold-water irrigation (DAC). The variance of GCA was much larger than that of SCA in plant height, shoot dry weight per plant (DWP), crop growth rate (CGR) and cold-water response index (CRI) of these characters except CRI of shoot dry weight per plant. The DWP, CGR and CRI of these characters of Gaochan 102, Tong88-7 and TR22183 were markedly higher than those of the others. GCA effects of these varieties on DWP, CGR and their CRI were also higher than those of the others, indicating that they are useful as promising parents for breeding cold-tolerant varieties. Analysis of genetic parameters for 11$\times$11 half-diallel F$_1$s revealed that inter-locus gene interaction were concerned in the expression of plant height at 50 DAC, CRI of DWP at 50 DAC, and CRI of CGR, and that intra-locus gene interaction for plant height and the other characters were partial dominance and over-dominance, respectively. Narrow-sense heritability (h$^2$$_{N}$) was the highest in plant height as 0.729, and the lowest in CRI of DWP at 30 DAC as 0.048, suggesting that selection for cold tolerance will be quite effective in case that the selection criterion is the performance itself.f.

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Genetic Analysis of Photoinhibition in Barley

  • Chun, Jong-Un
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.46 no.4
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    • pp.296-302
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    • 2001
  • Winter cereals are acclimated during wintering, and thereafter their freezing resistance is increased. In order to analyze inheritance and heritabilities for photoinhibition of photosynthesis by high light intensity under low temperature, and to evaluate the relationship between low temperature-induced photoinhibition and winter survival, 4 parental half diallel crosses were used. The detached leaves of 7-8cm long from plants grown for 35 and 55 days were placed on wet filter paper and placed in trays at 5$^{\circ}C$ cold room with 1,200 $\mu$mol $m^{-2}$ $s^{-1}$ PPFD. Chlorophyll fluorescence was measured with a chlorophyll fluorescence system after dark adaptation for 30 min. The Fv/Fm of 35day old plants was reduced from 0.714 in the control leaves to 0.409 and 0.368 following photoinhibitory treatment of 6h and 8h and the CVs were increased from 0.8% to 22.2-22.3%. The Fv/Fm of 55-day old plants was reduced from 0.775 in the control leaves to 0.485 and 0.439 following photoinhibitory treatment of 10h and 12h, respectively. According to half diallel cross analysis, Reno and Dongbori 1 (highly resistant to photoinhibition) was dominant, but Oweolbori (susceptible to photoinhibition) was recessive, and photoinhibition showed partial dominance with highly additive gene action. Dongbori 1 showed the greatest GCA effects for photoinhibition, and GCA/SCA ratios (8.7-22.3 times) indicated that the additive variance for the character was more important. Winter survival in barley crosses was positively correlated with resistance to photoinhibition and significantly fitted by linear regression ($R^2$=0.751$^{**}$-0.779$^{**}$). The chlorophyll fluorescence measured by Fv/Fm has been found to be highly inheritable and very useful in evaluating relative levels of freezing resistance in barley.ley.

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Analysis of Non-segregated S-allele Strain by Single-Locus Hypothesis in Self-incompatible Brassica campestris (자가불화합성 Brassica campestris에 있어서 단일유전자좌가설에 의해 분리되지 않는 S-유전자 계통의 분석)

  • 노일섭
    • Journal of Plant Biology
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    • v.36 no.2
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    • pp.127-132
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    • 1993
  • Self-incompatibility in Brassica campestris is controlled by multi-allele system in a single genetic locus, the S locus, and it is elucidated that S-glycoproteins are S gene products. In this experiments, we examined the genetic mode(pollen tube behavior and segregation of S-glycoprotein), characteristic of S-glycoproteins and DNA constitution within nuclear genome on S gene family that unexplained by single locus model, and investigated the segregation pattern of S-glycoproteins in bred F1 generation. By diallel cross among the 15 plants within one family the existence of three types of homozygotes and three types of heterozygotes were observed, and segregation of S-allele could not explained by single locus model. From the results of IEF-immunoblot analysis for non-segregated individual plant, the segregation pattern of S specific bands was corresponded with results of diallel cross except with one case(SaSa genotype). The molecular weight of 6 different S-genotype varied in near by 50 kD, and each genotype expressed with 2 or 3 bands. Specific bands in SaSa, SbSb, ScSc has almost similar molecular weight between them. Southern analysis of genomic DNA probed with S-glycoprotein cDNA for 6 different genotypes revealed that there are clear difference in polymorphism, multiple bands of hybridization, when restriction enzymes of EcoR I were used. It could be assumed that there are several sequences related to the S-glycoprotein structural genes within their nuclear genome. Therefore, we suggested the possibilities that S-allele system could be controlled by multi-locus, that dominance-recessive interactions could be explained by modifier gene or supressor gene based on the results of abnormal segregation of S-glycoprotein in bred F1. The F2 analyses are progressing in now.

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Diallel Analysis and Least Square Estimators of Genetic Parameters

  • Shin, Han-Poong
    • Journal of the Korean Statistical Society
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    • v.4 no.2
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    • pp.139-151
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    • 1975
  • Individual effect of genes controlling quantitative traits can not ordinarily be distinguised from one another. Consequently, it is not possible to determine the mode of inheritance for single genes. By studying their combined effectsin segregating generations, however, one can gain some insight into their behavior and can make statistical inferences about their average gene action. The investigation reported herein was to extend genetic variance components and variance and covariance analyses, special attention was given to the genetic statistics from which least square estimators of genetic parameters are obtained.

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Genetic Analysis on Quantitative Characters of Silkworm (Bombyx mori.) by Diallel Crosses (가잠의 이면교잡에 의한 유용 형질의 유전분석)

  • 정원복;이상풍
    • Journal of Sericultural and Entomological Science
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    • v.31 no.1
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    • pp.25-36
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    • 1989
  • In this experiment, gene action were analyzed for seven silkworm varieties in order to obtain basic information on their genetic improvement by diallel crosses. The results obtained were summarized as follows : In F1 generation, over-dominance was shown by Vr-Wr graphic analysis in four characters such as cocoon length in female, bave weight, cocoon weight and boiling off ratio in both male and female, and partial dominance in four characters such as fifth instar period, cocoon layer weight, cocoon layer ratio and bave length. In F2 generation, the partial dominance in all characters were obtained. Components of genetic variance analyzed for five characters such as fifth instar period, cocoon width, cocoon layer weight, cocoon layer ratio and fibroin contents in F1 generation, and for four characters such as cocoon width, cocoon layer weight, cocoon layer ratio and frbroin contents in F2 generation showed that addition effects were higher than dominant effects.

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Combining Ability of Japonica Rices for Salinity Tolerance at Seedling Stage (자포니카 벼 품종의 유묘 내한성에 대한 조합능력)

  • Lee, Kyu-Seong;Park, Nam-Kyu;Yang, Sae-Jun
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.42 no.3
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    • pp.270-274
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    • 1997
  • This experiment was conducted to evaluate the combining ability of japonica rices for improving the salinity tolerance at seedling stage. Nine varieties used in partial diallel analysis included three varieties of each tolerant, moderately tolerant and susceptible one. Twelve-day-old seedlings were grown in saline solution, initially at an EC of 6 dS /m for four days, followed by an EC of 12 dS /m for 20 days. The agronomic characters at seedling stage such as plant height, dry shoot weight and dry root weight were measured to analyze for combining ability of the parents. General combining ability(GCA) and specific combining ability(SCA) effects were highly significant for all tested parameters. However, mean squares for GCA were about five times larger than that for SCA suggesting the preponderance of additive gene action. Among tolerant varieties, Gaori and Namyang 7 were good combiner for improving the salinity tolerance at seedling stage in GCA as well as SCA.

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Comparison of Stress Response in Diallel Crossed Korean Domestic Chicken Breeds (토종 종계를 이용한 이면 교배조합 계통 간 스트레스 반응정도 비교 분석)

  • Cho, Eun Jung;Park, Ji Ae;Choi, Eun Sik;Sohn, Sea Hwan
    • Korean Journal of Poultry Science
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    • v.43 no.2
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    • pp.77-88
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    • 2016
  • To establish a new synthetic Korean meat chicken breed, we tested $5{\times}5$ diallel cross mating experiment with domestic chicken breeds. Comparing stress responses among diallel crossed chicken breeds, we analyzed telomere length, DNA damage and expressions of heat shock protein genes (HSPs) as the markers of the stress response. The telomere length was measured by quantitative fluorescence in situ hybridization on the nuclei of lymphocytes. The expression levels of HSP-70, $HSP-90{\alpha}$ and $HSP-90{\beta}$ genes were analyzed by quantitative real-time polymerase chain reaction in lymphocytes. The DNA damage rate of lymphocytes was quantified by the comet assay known as the single cell gel electrophoresis. In results, there were significant differences in the values of the stress markers such as telomere length, HSPs and DNA damage rate, and also were significant differences in viabilities and body weights among the $5{\times}5$ diallel crossed chicken breeds. The telomere shortening rate, expression values of HSPs and DNA damage rate were significant low in W and Y crossed chickens compare to the others, but GG pure breed showed the highest values in the 25 crossed chickens. Estimating correlation coefficient, the survival rate positively correlated to telomere length, but negatively correlated to the expression levels of HSP-70, $HSP-90{\alpha}$, $HSP-90{\beta}$ genes and to the value of % DNA in tail as DNA damage rate. The expression levels of HSP-70, $HSP-90{\alpha}$ and $HSP-90{\beta}$ genes of dead chickens had significantly higher than those of survival chickens. According to the results on the stress marker analysis, it would be considered that the crossed breeds had more stress resistant than the pure breeds, and the crossed chickens with a light strain such as W or Y were relatively resistant to stress, but the crossed chickens with a heavy strain such as G, H, F were susceptible to stress.