• ALGAE
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• 제22권3호
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• pp.221-228
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• 2007

Frequent occurrences of green tides caused by Ulva species (Ulvales, Ulvophyceae) associated with eutrophication along enclosed coasts are currently causing environmental problems in coastal ecosystems. In addition, increasing intercontinental introductions of coastal marine organisms, including Ulva, are also a serious issue. However, due to the considerable morphological plasticity of this genus, the taxonomy of Ulva species based on morphological studies is problematic. Therefore, in order to elucidate the species diversity and seasonal changes of the dominant Ulva species in Mikawa Bay, central Honshu, Japan, we made seasonal collections of Ulva species at seven localities, and identified the dominant species using the ITS2 rDNA region sequences. We identified the following nine taxa as common Ulva species in the area: 1) Ulva pertusa Kjellman; 2) U. ohnoi Hiraoka et Shimada; 3) U. linza L.; 4) U. californica Wille; 5) U. flexuosa Wulfen; 6) U. fasciata Delile; 7) U. compressa L.; 8) U. armoricana Dion et al.; 9) U. scandinavica Bliding. Among the species, U. pertusa was most common and dominant from spring to summer, and U. ohnoi from autumn to winter. Ulva californica and U. scandinavica have not been reported before from Japan.

• 생명과학회지
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• 제11권2호
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• pp.133-137
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• 2001

The molecular taxonomic relationship of nine species in the genus Moniliella Stolk & Dakin and Trichosporonoides Haskins & Spencer and six species of other yea나-like fungi was examined by sequencing analysis of large subunit rDNA D1/D2 variable domain. The fifteeen species fell into two major groups corresponding with their genetic relationships. The nine species of the genus Moniliella and Trichosporonoides were placed at the same cluster. similarity values based on the D1/D2 domain sequences were 45.4-100% among species of genus Moniliella, 45.2-84.4% among genus Trichosporonoides species, and 45.6-90.1% among species of genus Moniliella and Trichosporonoides. Identical sequence similarity was observed between M. suaveolens var. nigra and M. suaveolens. A colse relationship of M. mellis. and M. acetoabutens is observed. The result of this study provided and insight into the genetic origins of genus Moniliella and Trichosporonoides species as well as their genetic relationships. Genus Moniliella and Trichosporonoides are closely related to each other based on sequence analysis of the large subunit rDNA D1/D2 region and we suggest combination of the genus Moniliella and Trichosporonoides to single genus.

• 한국수산과학회지
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• 제49권4호
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• pp.493-498
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• 2016

Squalus acanthias has been considered the valid scientific name for piked dogfish by many taxonomists, although others recognize two valid species, Squalus suckleyi and S. acanthias, based on differences in the numbers of precaudal vertebrae and their distribution. We compared Korean piked dogfish with S. acanthias from New Zealand using morphological and molecular methods to elucidate the taxonomy. The Korean piked dogfish was distinguished from S. acanthias from New Zealand by the number of precaudal vertebrae (70-75 in the former vs. 77-80 in the latter) and 540 base pairs in the mitochondrial DNA cytochrome c oxidase subunit I sequence (genetic distance: 0.007-0.013). Therefore, we suggest that the scientific name of the Korean piked dogfish be changed from S. acanthias to S. suckleyi.

• 식물분류학회지
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• 제45권1호
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• pp.22-28
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• 2015

목포시 유달산에서 발견된 황단나무(Dalbergia hupeana)의 신분포를 보고한다. 본 종은 중국에만 분포하는 것으로 알려져 있었으나 이번 연구를 통해서 한반도에도 자라는 것이 확인되었다. 종의 동정은 형태 형질과 DNA 염기서열을 통해 확인하였다. 황단나무속(Genus Dalbergia) 또한 한국산으로 처음 보고되는데, 다른 한국산 콩과 수종들과는 양체웅예(5+5)를 가지는 것으로 뚜렷이 구분된다. 본 속과 종의 형태형질에 대해 기재하였으며, 이들의 국내 분포기원이 자생 또는 도입에 의한 것인지 논의하였다.

• 식물분류학회지
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• 제45권2호
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• pp.136-144
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• 2015

원기재문과 기준표본을 근거로 애기황새냉이(Cardamine manshurica (Kom.) Nakai)의 분류학적 실체와 형태적 특성을 재검토하였다. 그 결과, 애기황새냉이는 유럽에 분포하는 좀냉이(C. parviflora L.)와는 다른 분류군으로, 형태학적으로 황새냉이(C. flexuosa With)와 유사하나, 꽃과 열매의 크기가 작고 개화기가 빠른 특징에 의해 황새냉이를 비롯한 근연분류군과 종 수준에서 명확하게 구분되었으며, nrDNA를 이용한 ITS 구간을 이용한 분자생물학적 분석 결과에 의해서도 지지되었다. 따라서 본 분류군을 종으로 처리하는 것이 타당하다고 판단하였고, 학명은 C. manshurica (Kom.) Nakai를 정명으로 하였으며, 국명은 황새냉이보다 키가 작고 꽃이 소형인 특징에 기인하여 '애기황새냉이'를 채택하였다.

• 식물분류학회지
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• 제49권4호
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• pp.334-344
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• 2019

The genome size is defined as the amount of DNA in an unreplicated gametic chromosome complement and is expressed as the 1C value. It is a fundamental parameter of organisms that is useful for studies of the genome, as well as biodiversity and conservation. The genome sizes of Korean plants, including Carex (Cyperaceae), have been poorly reported. In this study, we report the genome sizes of 43 species and infraspecific taxa of Korean Carex using flow cytometry, and these results represent about 24.4% of the Carex species and infraspecific taxa distributed on the Korean peninsula. The Plant DNA C-Value Database (release 7.1) updated with and now including our data (a total of 372 Carex accessions) shows that the average genome size of members of the Carex species is 0.47 pg (1C), and the largest genome (C. cuspidate Bertol.; 1C = 1.64 pg) is 8.2 times larger than the smallest (C. brownii Tuck., C. kobomugi Ohwi, C. nubigena D. Don ex Tilloch & Taylor, and C. paxii Kuk.; 1C = 0.20 pg). The large genomes are frequently found in the subgen. Carex, especially in sect. Aulocystis, sect. Digitatae, sect. Glaucae, sect. Paniceae, and sect. Siderostictae. Our data updates the current understanding of genome sizes in Carex. This will serve as the basis for understanding the phylogeny and evolution of Carex and will be especially useful for future genome studies.

• Mycobiology
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• 제45권4호
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• pp.263-269
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• 2017

The genus Peronospora, an obligate biotrophic group belonging to Oomycota, causes serious damage to a variety of wild and ornamental plants, as well as cultivated crops, such as beet, rose, spinach, and tobacco. To investigate the diversity of Peronospora species parasitic to Stellaria and Pseudostellaria (Caryophyllaceae) plants in Korea, we performed a morphological analysis on dried herbarium specimens and molecular phylogenetic inferences based on internal transcribed spacer rDNA and cox2 mitochondrial DNA sequences. As a result, it was confirmed that there are four species of Peronospora parasitic to specific species of Stellaria and Pseudostellaria, all of which were hitherto unrecorded in Korea: P. alsinearum (ex Stellaria media), P. stellariae-aquaticae (ex Stellaria aquatica), P. stellariae-uliginosae (ex Stellaria alsine), and P. pseudostellariae (ex Pseudostellaria palibiniana). In addition, Peronospora specimens parasitic to Pseudostellaria davidii differed morphologically from P. pseudostellariae owing to the large and ellipsoidal conidia; this morphological discrepancy was also validated by the high genetic divergence between the two species. Peronospora casparyi sp. nov. is described and illustrated here.

• ALGAE
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• 제32권1호
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• pp.29-39
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• 2017

Geographic distributions of pathogens are affected by dynamic processes involving host susceptibility, availability and abundance. An oomycete, Pythium porphyrae, is the causative agent of red rot disease, which plagues Pyropia farms in Korea and Japan almost every year and causes serious economic damage. We isolated an oomycete pathogen infecting Pyropia plicata from a natural population in Wellington, New Zealand. The pathogen was identified as Pythium porphyrae using cytochrome oxidase subunit 1 and internal transcribed spacer of the rDNA cistron molecular markers. Susceptibility test showed that this Pythium from New Zealand was able to infect several different species and genera of Bangiales including Pyropia but is not able to infect their sporophytic (conchocelis) phases. The sequences of the isolated New Zealand strain were also identical to Pythium chondricola from Korea and the type strain from the Netherlands. Genetic species delimitation analyses found no support for separating P. porphyrae from P. chondricola, nor do we find morphological characters to distinguish them. We propose that Pythium chondricola be placed in synonymy with P. porphyrae. It appears that the pathogen of Pyropia, both in aquaculture in the northern hemisphere and in natural populations in the southern hemisphere is one species.

• Mycobiology
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• 제47권3호
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• pp.319-328
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• 2019

Cytospora is a genus including important phytopathogens causing severe dieback and canker diseases distributed worldwide with a wide host range. However, identification of Cytospora species is difficult since the currently available DNA sequence data are insufficient. Aside the limited availability of ex-type sequence data, most of the genetic work is only based on the ITS region DNA marker which lacks the resolution to delineate to the species level in Cytospora. In this study, three fresh strains were isolated from the symptomatic branches of Elaeagnus angustifolia in Xinjiang Uygur Autonomous Region, China. Morphological observation and multi-locus phylogenetic analyses (ITS, LSU, ACT and RPB2) support these specimens are best accommodated as a distinct novel species of Cytospora. Cytospora elaeagnicola sp. nov. is introduced, having discoid, nearly flat, pycnidial conidiomata with hyaline, allantoid conidia, and differs from its relatives genetically and by host association.

• 한국균학회지
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• 제47권2호
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• pp.105-112
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• 2019

A unrecorded species of Trichocladium, Trichocladium griseum, was isolated in 2017 during a survey of fungal diversity in Ulsan province, South Korea. This species was identified based on morphological characteristics and phylogenetic analysis of the internal transcribed spacer (ITS) rDNA and ${\beta}-tubulin$ gene sequences. T. griseum has not yet been reported in South Korea. Thus, we report for the first time a new record of Trichocladium griseum in Korea, and we include the descriptions and morphological illustrations of this fungus.