• 제목/요약/키워드: DNA Synthesis

검색결과 768건 처리시간 0.028초

Enhanced Stability of Tyrosine Phenol-Lyase from Symbiobacterium toebii by DNA Shuffling

  • Kim, Jin-Ho;Song, Jae-Jun;Kim, Bong-Gyun;Sung, Moon-Hee;Lee, Sang-Chul
    • Journal of Microbiology and Biotechnology
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    • 제14권1호
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    • pp.153-157
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    • 2004
  • Tyrosine phenol-lyase (TPL) is a useful enzyme for the synthesis of pharmaceutical aromatic amino acids. In the current study, sequential DNA shuffling and screening were used to enhance the stability of TPL. Twenty-thousand mutants were screened, and several improved variants were isolated. One variant named A13V, in which the $13^{th}$ amino acid alanine was substituted by valine, exhibited a higher temperature and denaturant stability than the wild-type TPL. The purified mutant TPL, A13V, retained about 60% of its activity at $76^\circ{C}$, whereas the activity of the wild-type TPL decreased to less than 20% at the same temperature. Plus, A13V exhibited about 50% activity with 3 M urea, while the wild-type TPL lost almost all its catalytic activity, indicating an increased denaturant tolerance in the mutant A13V. It is speculated that the substitution of Val for the Ala in the $\beta$-strand of the N-terminal arm was responsible for the heightened stabilization, and that the current results will contribute to further research on the structural stability of TPL.

纖維質 資化性菌의 分子育種에 관한 硏究 -Cellulomonas속균의 ${\beta}$-glucosidase gene의 E. coli에의 cloning - (Studies on Molecular Improvement of Cellulose Utilizing Bacterial Strain -Molecular cloning of ${\beta}$-glucosidase gene of Cellulomonas sp. in E. coli-)

  • 배무;이재문
    • 미생물학회지
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    • 제22권3호
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    • pp.167-173
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    • 1984
  • The cellabiase (${\beta}$-glucosidase) gene in a Cellulomonas sp. CS1-1 was cloned into E. coli HB101 using the vector plasmid pBR322, and the expression of the gene in E. coli studied. The chromosomal DNA of the cellulomonas was digested by seveal restriction enzymes, each of which has only one cleaving site in plasmid pBR322. The recombinant plasmid, pSB2, created with Sal I frament, was expressed for the cellobiase gene in E. coli. The recombiant plasmid was estimated to contain 6.4 Kb foreign DNA at the Sal I site of plasmid pBR322 and the inserted DNA was mapped by single and double digestion with several enzymes. E. coli HB101(pSB2) has slowly grown in a mineral liquid medium containing cellobiose as a sole carbon source. The cellobiase activity in the transformed E. coli was 132 units per liter, which is equivalent to one twenty fifth of that in doner strain Cellulomonas sp. CS1-1. The transforned cell with plasmid containing cellulase gene grow well in the LB mediuns. The synthesis of cellobiase in the strain, E. coli HB101 (pSB2), was inhibited by glucose and at high concentration of cellobiose, and induced by cellobiose at low concentration.

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Synthesis and Characterization of Oligonucleotides Containing Site-Specific Bulky $N^2$-Aralkylated Guanines and $N^6$-Aralkylated Adenines

  • Moon, Ki-Young;Kim, Yeong-Shik
    • Archives of Pharmacal Research
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    • 제23권2호
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    • pp.139-146
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    • 2000
  • 7- Bromomethylbenz[a]anthracene is a known mutagen and carcinogen. The two major DNA adducts produced by this carcinogen, i.e., $N^2$-(benz[a]anthracen-7-yl methyl)-2'-deoxyguanosine (2, b[a]$a^2$G) and $N^6$-(benz[a]anthracen-7-ylmethyl)-2'-deoxyadenosine (4, b[a]$a^6$/A), as wel 1 as the simpler benzylated analogs,$N^2$-benzyl-2'deoxyguanosine (1, $bn^2$G) and $N^6$-benzyl-2'-deoxyadenosine (3, $bn^6$/A), were prepared by direct aralkylation of 2'-deoxyguanosine and 2'-deoxyadenosine. To determine the site-specific mutagenicity of these bulky exocyclic amino-substituted adducts, the suitably protected nucleosides were incorporated into 16-base oligodeoxyribonucleotides in place of a normal guanine or adenine residues which respectively are part of the ATG initiation codon for the lac Z' \alpha-complementation gene by using an in situ activation approach and automated phosphite triester synthetic methods. The base composition and the incorporation of the bulky adducts into synthetic oligonucleotides were characterized after purification of the modified oligonucleotides by enzymatic digestion and HPLC analysis.

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Molecular Characterization of an Apple cDNA Encoding Cinnamyl Alcohol Dehydrogenase

  • Kim, Sung-Hyun;Lee, Jae-Rin;Shin, Yong-Uk;An, Gyn-Heung;Kim, Seong-Ryong
    • Journal of Microbiology and Biotechnology
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    • 제9권4호
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    • pp.475-481
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    • 1999
  • The study of lignin, a major component of secondary cell wall, has been partly focused on its removal from the woody part in the kraft pulping industry. Cinnamyl alcohol dehydrogenase (CAD; EC 1.1.l95) catalyzes the synthesis of cinnamyl alcohols from corresponding cinnamaldehydes. A cDNA clone, MdCADl, encoding putative CAD from apples (Malus domestica Borkh. cv Fuji) was characterized in this study. The clone contains an open reading frame of 325 amino acid residues, which shows a greater than 80% identity with Eucalyptus CADl. MdCADl mRNA was detectable in vegetative tissues and was strongly expressed in the fruit. The expression pattern of MdCADl mRNA in the fruit peel after light exposure was also examined. The mRNA was rapidly increased until 1 day after light exposure and remained stable thereafter, suggesting that MdCADl is light inducible. The inducibility of the MdCADl gene was examined using several environmental stresses. Mechanical wounding of leaves increased the MdCADl mRNA level and the induction was further increased by salicylic acid. Southern blot hybridization showed that there is either one or a few copies of CAD genes in apples. To our knowledge, it is believed that MdCADl is the first CAD clone expressed predominantly in fruit.

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Helicobacter pylori urease subunit A 단백질의 식물체내에서의 발현 (Expression of Helicobacter pylori Urease Subunit A in Plant)

  • 이효정;이만형;신동일;정일경;최성진;박희성
    • 식물조직배양학회지
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    • 제27권3호
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    • pp.239-243
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    • 2000
  • 위염과 위궤양을 일으키는 Helicobacter pylori는 그 감염 환자에서 강한 항체형성을 유도하는 urease를 생산한다. 식물체를 이용하여 H. pylori에 대한 식용백신 모델을 제조하기 위하여 H. pylori의 urease 유전자를 지니고 있는 pH808 plasmid로부터 750bp의 ureA DNA를 PCR에 의해서 증폭한 후 이를 담배식물에서 발현이 되도록 조작하였다. 재분화된 형질전환 식물체로부터 ureA 유전자의 도입과 mRNA발현 및 단백질합성을 분석하였다. CaMV 35S promoter에 의한 ureA 유전자의 발현은 SDS polyacrylamide 전기영동 및 immunoblot실험에서 박테리아로부터의 재조합 단백질과 같은 크기의 30 kDA UreA 단백질이 생산되었음을 확인할 수 있었다.

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Effect of Poly(ethylene glycol)Grafting on Polyethylenimine as a Gene Transfer Vector in vitro

  • 최진희;최준식;서혜란;박종상
    • Bulletin of the Korean Chemical Society
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    • 제22권1호
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    • pp.46-52
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    • 2001
  • To evaluate the non-ionic polymer, poly(ethylene glycol) (PEG), as a component in cationic copolymers for non-viral gene delivery systems, PEG was coupled to polyethylenimine (PEI). We present the effects of different degrees and shapes of pegylation of PEI on cytotoxicity, water solubility and transfection efficiency. This work reports the synthesis and characterization of a series of cationic copolymers on the basis of the conjugates of PEI with PEG. The modified molecules were significantly less toxic than the original polymer. Moreover, the chemical modification led to enhancement of their solubility. The comparison of pegylated PEIs with different degrees of derivation showed that all the polymers tested reached comparable levels of transgene expression to that of native PEI. As assessed by agarose gel electrophoresis, even highly substituted PEI derivatives were still able to form polyionic complexes with DNA. However, aside from an increase in solubility and retention of the ability to condense DNA, methoxy-PEG-modified PEIs resulted in a significant decrease in the transfection activity of the DNA complexes. In fact, the efficiency of the copolymer was compromised even at a low degree of modification suggesting that the PEG action resulting from its shape is important for efficient gene transfer. The mode of PEG grafting and the degree of modification influenced the transfection efficiency of PEI.

A Synthetic Study on Cyclic Phosphate Derivatives of Seconucleosides as Potential Antiviral Agents (II):Synthesis of 3',5'-Cyclic Phosphates of 6-aza-2'-azido-secouridine

  • Shin, Dae-Hong;Yang, Jae-Wook;Kim, Joong-Hyup;Lee, Chong-Kyo;Chung, Won-Keun;Chun, Moon-Woo
    • Archives of Pharmacal Research
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    • 제15권4호
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    • pp.343-346
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    • 1992
  • The synthesis of 6-aza-3', 5'-p-nitrophenylphosphoryltrioxy-2'-azido-2'-deoxy-2', 3' secouridine and 6-aza-3', 5'-phosphoryltrioxy-2'-azido-2'-deoxy-2', 3'-secouridine ammonium salt are described and they were evaluated for antiviral activity primarily against DNA and RNA viruses and found to be inactive, but no significant cytocidal effect was observed against Vero and Hela cell.

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Chlorella의 생리에 미치는 Indole acetic acid의 영향 (Physiological effects of indole acetic acid (IAA) on chlorella ellipsoidea)

  • 채인기
    • 미생물학회지
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    • 제10권3호
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    • pp.117-127
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    • 1972
  • To study the effect of IAA on the growth of Chlorella, the alage wre cultured on the media for six days by bubbling $_{2}$ enriched air under 10K lux at 20-$25^{\circ}C$. The culture media were made by adding a concentration of $10^{-3}$M, $10^{-4}$M, and 0M(as a control) IAA to the standard media. During the period of culture, Chlorella was smapled for the given time of interval and photosynthetic and respiratory activities were measured by Warburg manometer and change of chemical components of Chlorella was determined by spectrophotometry after the Chlorella cell was fractionated by Schmidt-Thannhauser method. 1) Photosynthetic and respiratory activities were enhanced by IAA ; especially the enhancement of respiratory activity was so remarkable. 2) As to the chemical components of Chlorella, carbohydrates and amino acids were reduced a little but phosphate, RNA, DNA, and protein were increased by $10^{-3}$M IAA ; the increase of RNA, in particular, was noticable. 3) The above results suggest that the enhancement of growth of Chlorella, by IAA and ATP induced by respiratory activity accelerated with IAA enhanced RNA synthesis, resulting in an increase of protein synthesis.

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Chlorella제포에서 분리한 엽록체의 핵산합성 1 (Biosynthesis of Nucleic Acid in Chloroplast Isolated from Chlorella Cells. I.)

  • 이종삼;석영애
    • 미생물학회지
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    • 제21권4호
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    • pp.197-206
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    • 1983
  • For the purpose of investigating the effect of nalidixic acid on the nucleic acid synthesis in chloroplast isolated from Chlorella ellipsoidea, cells were cultured in the media treated with nalidixic acid(20ppm) for 5 days. Aliquots cells were taken out at the inoculation and at intervals during the culture and growth rate of Chlorella cells measured. After extraction of nucleic acids in chloroplast isolated from these cells, their contents were analyzed by the base composition and the effect of nalidixic acid on the nucleic acid synthesis interpreted to compare with those of the control. 1. It was showed that the inhibitory concentration affected by nalidixic acid on the growth of Chlorella cells were 20ppm. 2. Because nalidixic acid had depressed the DNA replication in isolated chloroplast as well as whole cell system, these contents were markedly decreased in comparison with those of the control. 3. In the isolated chloroplast as well as in the whole cell system, nalidixic acid was decreased contents of base in the RNA by preventing RNA transcription.

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Methylelaiophylin의 항균활성 (Antibacterial Activities of Methylelaiophylin)

  • 이동선;이상한;우주형;이진만;서영배;홍순덕
    • 생명과학회지
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    • 제7권3호
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    • pp.180-185
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    • 1997
  • Methylelaiophylin은 gram양성균에 대하여 광범위한 항균활성을 보이며, 특히Bacillus subtilis에서 superoxide redicals을 발생하여 항균활성을 나타낸다. B. subtilis에 대한 항균활성은 wild type strain보다 mutant strain인 rec$^{-}$에 대하여 더민감하며, 이러한 항균력은 항산화제인 dithiothreito에 의하여 현저히 감소되었다. 또한 항균력은 세포내 RNA합성보다 DN합성에 효과적으로 작용하였다. 이러한 결과들은 methylelaiophylin의 항균활성이 세포내에서 발생한 활성산소에 의하여 기인한 것임을 나타낸다.

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