• Title/Summary/Keyword: Correlation mapping

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Utilization of Elite Korean Japonica Rice Varieties for Association Mapping of Heading Time, Culm Length, and Amylose and Protein Content

  • Mo, Youngjun;Jeong, Jong-Min;Kim, Bo-Kyeong;Kwon, Soon-Wook;Jeung, Ji-Ung
    • KOREAN JOURNAL OF CROP SCIENCE
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    • v.65 no.1
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    • pp.1-21
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    • 2020
  • Association mapping is widely used in rice and other crops to identify genes underlying important agronomic traits. Most association mapping studies use diversity panels comprising accessions with various geographical origins to exploit their wide genetic variation. While locally adapted breeding lines are rarely used in association mapping owing to limited genetic diversity, genes/alleles identified from elite germplasm are practically valuable as they can be directly utilized in breeding programs. In this study, we analyzed genetic diversity of 179 rice varieties (161 japonica and 18 Tongil-type) released in Korea from 1970 to 2006 using 192 microsatellite markers evenly distributed across the genome. The 161 japonica rice varieties were genetically very close to each other with limited diversity as they were developed mainly through elite-by-elite crosses to meet the specific local demands for high quality japonica rice in Korea. Despite the narrow genetic background, abundant phenotypic variation was observed in heading time, culm length, and amylose and protein content in the 161 japonica rice varieties. Using these varieties in association mapping, we identified six, seven, ten, and four loci significantly associated with heading time, culm length, and amylose and protein content, respectively. The sums of allelic effects of these loci showed highly significant positive correlation with the observed phenotypic values for each trait, indicating that the allelic variation at these loci can be useful when designing cross combinations and predicting progeny performance in local breeding programs.

Optical Image Switching System based on BPEJTC (BPEJTC를 이용한 광 영상 스위칭 시스템)

  • 이상이;이승현;양훈기;김은수
    • Journal of the Korean Institute of Telematics and Electronics A
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    • v.32A no.10
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    • pp.51-63
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    • 1995
  • In this paper, a new real-time optical image switching system based on the phase-typed BPEJTC is suggested. The phase filter mask which has the arbitrary position mapping function between input and output planes is constructed by using the modified JTPS of the BPEJTC. Then, the input image is convolved with this phase filter mask in the spatial frequency domain and through further Fourier transform the input image is switched to the new positions in the output correlation plane where the correlation peaks are occurred. And, based on the computer simulation results, the practical optical switched to the new positions in the output correlation plane where the correlation peaks are occurred. And, based on the computer simulation results, the practical optical switching system is opto-digitally constructed and through some experiments on image switching the possiblity of real-time implementation of the multiple optical image switching system by using the BPEJTC is suggeste.

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Enhanced RGB Video Coding Based on Correlation in the Adjacent Block (인접블록의 상관관계에 기반한 RGB video coding 개선 알고리즘)

  • Kim, Yang-Soo;Jeong, Jin-Woo;Choe, Yoon-Sik
    • The Transactions of The Korean Institute of Electrical Engineers
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    • v.58 no.12
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    • pp.2538-2541
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    • 2009
  • H.264/AVC High 4:4:4 Intra/Predictive profiles supports RGB 4:4:4 sequences for high fidelity video. RGB color planes rather than YCbCr color planes are preferred by high-fidelity video applications such as digital cinema, medical imaging, and UHDTV. Several RGB coding tools have therefore been developed to improve the coding efficiency of RGB video. In this paper, we propose a new method to extract more accurate correlation parameters for inter-plane prediction. We use a searching method to determine the matched macroblock (MB) that has a similar inter-color relation to the current MB. Using this block, we can infer more accurate correlation parameters to predict chroma MB from luma MB. Our proposed inter-plane prediction mode shows an average bits saving of 15.6% and a PSNR increase of 0.99 dB compared with H.264 high4:4:4 intra-profile RGB coding. Furthermore, extensive performance evaluation revealed that our proposed algorithm has better coding efficiency than existing algorithms..

An Application of Canonical Correlation Analysis Technique to Land Cover Classification of LANDSAT Images

  • Lee, Jong-Hun;Park, Min-Ho;Kim, Yong-Il
    • ETRI Journal
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    • v.21 no.4
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    • pp.41-51
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    • 1999
  • This research is an attempt to obtain more accurate land cover information from LANDSAT images. Canonical correlation analysis, which has not been widely used in the image classification community, was applied to the classification of a LANDSAT images. It was found that it is easy to select training areas on the classification using canonical correlation analysis in comparison with the maximum likelihood classifier of $ERDAS^{(R)}$ software. In other words, the selected positions of training areas hardly affect the classification results using canonical correlation analysis. when the same training areas are used, the mapping accuracy of the canonical correlation classification results compared with the ground truth data is not lower than that of the maximum likelihood classifier. The kappa analysis for the canonical correlation classifier and the maximum likelihood classifier showed that the two methods are alike in classification accuracy. However, the canonical correlation classifier has better points than the maximum likelihood classifier in classification characteristics. Therefore, the classification using canonical correlation analysis applied in this research is effective for the extraction of land cover information from LANDSAT images and will be able to be put to practical use.

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New Construction Method for Quaternary Aperiodic, Periodic, and Z-Complementary Sequence Sets

  • Zeng, Fanxin;Zeng, Xiaoping;Zhang, Zhenyu;Zeng, Xiangyong;Xuan, Guixin;Xiao, Lingna
    • Journal of Communications and Networks
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    • v.14 no.3
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    • pp.230-236
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    • 2012
  • Based on the known binary sequence sets and Gray mapping, a new method for constructing quaternary sequence sets is presented and the resulting sequence sets' properties are investigated. As three direct applications of the proposed method, when we choose the binary aperiodic, periodic, and Z-complementary sequence sets as the known binary sequence sets, the resultant quaternary sequence sets are the quaternary aperiodic, periodic, and Z-complementary sequence sets, respectively. In comparison with themethod proposed by Jang et al., the new method can cope with either both the aperiodic and periodic cases or both even and odd lengths of sub-sequences, whereas the former is only fit for the periodic case with even length of sub-sequences. As a consequence, by both our and Jang et al.'s methods, an arbitrary binary aperiodic, periodic, or Z-complementary sequence set can be transformed into a quaternary one no matter its length of sub-sequences is odd or even. Finally, a table on the existing quaternary periodic complementary sequence sets is given as well.

Accuracy verification for unmanned aerial vehicle system for mapping of amphibians mating call (양서류 번식음 맵핑을 위한 무인비행장치 시스템의 정확성 검증)

  • Park, Min-Kyu;Bae, Seo-Hyu
    • Journal of the Korean Society of Environmental Restoration Technology
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    • v.25 no.2
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    • pp.85-92
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    • 2022
  • The amphibian breeding habitat is confirmed by mating call. In some cases, the researcher directly identifies the amphibian individual, but in order to designate the habitat, it is necessary to map the mating call region of the amphibian population. Until now, it has been a popular methodology for researchers to hear mating calls and outline their breeding habitats. To improve this subjective methodology, we developed a technique for mapping mating call regions using Unmanned Aerial Vehicle (UAV). The technology uses a UAV, fitted with a sound recorder to record ground mating calls as it flies over an amphibian habitat. The core technology is to synchronize the recorded sound pressure with the flight log of the UAV and predict the sound pressure in a two-dimensional plane with probability density. For a demonstration study of this technology, artificial mating call was generated by a potable speaker on the ground and recorded by a UAV. Then, the recorded sound data was processed with an algorithm developed by us to map mating calls. As a result of the study, the correlation coefficient between the artificial mating call on the ground and the mating call map measured by the UAV was R=0.77. This correlation coefficient proves that our UAV recording system is sufficiently capable of detecting amphibian mating call regions.

Performance Evaluation of Frame Synchronization Using Pilot Patterns in W-CDMA System (W-CDMA 시스템의 파일럿 패턴을 이용한 프레임 동기 성능 분석)

  • Song Young-Joon;Kim Han-Mook
    • The Journal of Korean Institute of Electromagnetic Engineering and Science
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    • v.17 no.3 s.106
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    • pp.272-279
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    • 2006
  • In this paper, we evaluate the performance of frame synchronization words of pilot bit patterns which are used for the channel estimation and frame synchronization confirmation in W-CDMA(Wide band Code Division Multiple Access) system. W-CDMA system also uses compressed mode to make measurements from another frequency without a full dual receiver terminal. It is confirmed by using computer simulation that the proposed frame synchronization words also maintain the frame synchronization property in the compressed mode by using the complementary mapping relationship of preferred pair ROC(Receiver Operating Characteristic) curves with probability of detection and false alarm are used to analized the performance of the proposed frame synchronization words by using the various detection metrics such as LLRT(Log Likelyhood Ratio Test), GLRT(Generalied Likelyhood Ratio Test), soft and hard correlation tests in AWGN and Rayleigh fading channels. It is expected that the research results fer the performance of pilot bit patterns of this paper can be useful reference for the design and implementation of frame synchronization in 3rd generation W-CDMA system.

Mineral Potential Mapping of Gagok Mine Using 3D Geological Modeling (3차원 지질모델링을 이용한 가곡광산 광상 포텐셜 지도 작성)

  • Park, Gyesoon;Cho, Seong-Jun;Oh, Hyun-Joo;Lee, Chang-Won
    • Journal of the Korean earth science society
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    • v.35 no.6
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    • pp.412-421
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    • 2014
  • In order to develop an effective mineral exploration technique, this study was carried out about the potential mapping of Gagok mine. The deposit model of Gagok mine is widely known. Based on the deposit model, we constructed mining indicator indices using related igneous rocks, faults, and carbonate rocks. By analyzing the spatial correlation between ore and indicator index structures, we decided the weighting values of indices according to the distance from the index structure. The 3D potential mapping was performed using 3D geological model and geological indices. The analyzed potential map verified that the locations and patterns of high potential regions of the results were well matched with those of the known ore bodies. Using the potential mapping results, we could effectively predict the location of a high potential area that has similar geological settings with ore.

Analysis of Regional Potential Mapping Factors of Metal Deposits using Machine Learning (머신러닝을 이용한 광역 금속 광상 배태 잠재성 평가 인자 분석)

  • Park, Gyesoon
    • Geophysics and Geophysical Exploration
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    • v.23 no.3
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    • pp.149-156
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    • 2020
  • The genesis of ore bodies is a very diverse and complex process, and the target depth of mineral exploration increases. These create a need for predictive mineral exploration, which may be facilitated by the advancement of machine learning and geological database. In this study, we confirm that the faults and igneous rocks distributions and magnetic data can be used as input data for potential mapping using deep neural networks. When the input data are constructed with faults, igneous rocks, and magnetic data, we can build a potential mapping model of the metal deposit that has a predictive accuracy greater than 0.9. If detailed geological and geophysical data are obtained, this approach can be applied to the potential mapping on a mine scale. In addition, we confirm that the magnetic data, which provide the distribution of the underground igneous rock, can supplement the limited information from the surface igneous rock distribution. Therefore, rather than simply integrating various data sets, it will be more important to integrate information considering the geological correlation to genesis of minerals.

FRACTAL CODING OF VIDEO SEQUENCE USING CPM AND NCIM

  • Kim, Chang-Su;Kim, Rin-Chul;Lee, Sang-Uk
    • Proceedings of the Korean Society of Broadcast Engineers Conference
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    • 1996.06b
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    • pp.72-76
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    • 1996
  • We propose a novel algorithm for fractal video sequence coding, based on the circular prediction mapping (CPM), in which each range block is approximated by a domain block in the circularly previous frame. In our approach, the size of the domain block is set to be same as that of the range block for exploiting the high temporal correlation between the adjacent frames, while most other fractal coders use the domain block larger than the range block. Therefore the domain-range mapping in the CPM is similar to the block matching algorithm in the motion compensation techniques, and the advantages of this similarity are discussed. Also we show that the CPM can be combined with non-contractive inter-frame mapping (NCIM), improving the performance of the fractal sequence coder further. The computer simulation results on real image sequences demonstrate that the proposed algorithm provides very promising performance at low bit-rate, ranging from 40 Kbps to 250 Kbps.

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