• Title/Summary/Keyword: Complex algorithm

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Identification of copy number variations using high density whole-genome single nucleotide polymorphism markers in Chinese Dongxiang spotted pigs

  • Wang, Chengbin;Chen, Hao;Wang, Xiaopeng;Wu, Zhongping;Liu, Weiwei;Guo, Yuanmei;Ren, Jun;Ding, Nengshui
    • Asian-Australasian Journal of Animal Sciences
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    • v.32 no.12
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    • pp.1809-1815
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    • 2019
  • Objective: Copy number variations (CNVs) are a major source of genetic diversity complementary to single nucleotide polymorphism (SNP) in animals. The aim of the study was to perform a comprehensive genomic analysis of CNVs based on high density whole-genome SNP markers in Chinese Dongxiang spotted pigs. Methods: We used customized Affymetrix Axiom Pig1.4M array plates containing 1.4 million SNPs and the PennCNV algorithm to identify porcine CNVs on autosomes in Chinese Dongxiang spotted pigs. Then, the next generation sequence data was used to confirm the detected CNVs. Next, functional analysis was performed for gene contents in copy number variation regions (CNVRs). In addition, we compared the identified CNVRs with those reported ones and quantitative trait loci (QTL) in the pig QTL database. Results: We identified 871 putative CNVs belonging to 2,221 CNVRs on 17 autosomes. We further discarded CNVRs that were detected only in one individual, leaving us 166 CNVRs in total. The 166 CNVRs ranged from 2.89 kb to 617.53 kb with a mean value of 93.65 kb and a genome coverage of 15.55 Mb, corresponding to 0.58% of the pig genome. A total of 119 (71.69%) of the identified CNVRs were confirmed by next generation sequence data. Moreover, functional annotation showed that these CNVRs are involved in a variety of molecular functions. More than half (56.63%) of the CNVRs (n = 94) have been reported in previous studies, while 72 CNVRs are reported for the first time. In addition, 162 (97.59%) CNVRs were found to overlap with 2,765 previously reported QTLs affecting 378 phenotypic traits. Conclusion: The findings improve the catalog of pig CNVs and provide insights and novel molecular markers for further genetic analyses of Chinese indigenous pigs.

Deep Learning-based SISR (Single Image Super Resolution) Method using RDB (Residual Dense Block) and Wavelet Prediction Network (RDB 및 웨이블릿 예측 네트워크 기반 단일 영상을 위한 심층 학습기반 초해상도 기법)

  • NGUYEN, HUU DUNG;Kim, Eung-Tae
    • Journal of Broadcast Engineering
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    • v.24 no.5
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    • pp.703-712
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    • 2019
  • Single image Super-Resolution (SISR) aims to generate a visually pleasing high-resolution image from its degraded low-resolution measurement. In recent years, deep learning - based super - resolution methods have been actively researched and have shown more reliable and high performance. A typical method is WaveletSRNet, which restores high-resolution images through wavelet coefficient learning based on feature maps of images. However, there are two disadvantages in WaveletSRNet. One is a big processing time due to the complexity of the algorithm. The other is not to utilize feature maps efficiently when extracting input image's features. To improve this problems, we propose an efficient single image super resolution method, named RDB-WaveletSRNet. The proposed method uses the residual dense block to effectively extract low-resolution feature maps to improve single image super-resolution performance. We also adjust appropriated growth rates to solve complex computational problems. In addition, wavelet packet decomposition is used to obtain the wavelet coefficients according to the possibility of large scale ratio. In the experimental result on various images, we have proven that the proposed method has faster processing time and better image quality than the conventional methods. Experimental results have shown that the proposed method has better image quality by increasing 0.1813dB of PSNR and 1.17 times faster than the conventional method.

A simple approach to refraction statics with the Generalized Reciprocal Method and the Refraction Convolution Section (GRM과 RCS 방법을 이용한 굴절파 정적 시간차를 구하는 간단한 방법)

  • Palmer Derecke;Jones Leonie
    • Geophysics and Geophysical Exploration
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    • v.8 no.1
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    • pp.18-25
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    • 2005
  • We derive refraction statics for seismic data recorded in a hard rock terrain, in which there are large and rapid variations in the depth of weathering. The statics corrections range from less than 10 ms to more than 70 ms, often over distances as short as 12 receiver intervals. This study is another demonstration of the importance in obtaining accurate initial refraction models of the weathering in hard rock terrains in which automatic residual statics may fail. We show that the statics values computed with a simple model of the weathering using the Generalized Reciprocal Method (GRM) and the Refraction Convolution Section (RCS) are comparable in accuracy to those computed with a more complex model of the weathering, using least-mean-squares inversion with the conjugate gradient algorithm (Taner et al., 1998). The differences in statics values between the GRM model and that of Taner et al. (1998) systematically vary from an average of 2ms to 4ms over a distance of 8.8 km. The differences between these two refraction models and the final statics model, which includes the automatic residual values, are generally less than 5 ms. The residuals for the GRM model are frequently less than those for the model of Taner et al. (1998). The RCS statics are picked approximately 10 ms later, but their relative accuracy is comparable to that of the GRM statics. The residual statics values show a general correlation with the refraction statics values, and they can be reduced in magnitude by using a lower average seismic velocity in the weathering. These results suggest that inaccurate average seismic velocities in the weathered layer may often be a source of short-wavelength statics, rather than any shortcomings with the inversion algorithms in determining averaged delay times from the traveltimes.

A Study on Smart Ground Resistance Measurement Technology Based on Aduino (아두이노 기반 IT융합 스마트 대지저항 측정 기술 연구)

  • Kim, Hong Yong
    • Journal of the Society of Disaster Information
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    • v.17 no.4
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    • pp.684-693
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    • 2021
  • Purpose: The purpose is to establish a safe facility environment from abnormal voltages such as lightning by developing a smart land resistance measuring device that can acquire real-time land resistance data using Arduino. Method: This paper studied design models and application cases by developing a land resistance acquisition and analysis system with Arduino and a power line communication (PLC) system. Some sites in the wind power generation complex in Gyeongsangnam-do were selected as test beds, and real-time land resistance data applied with new technologies were obtained. The electrode arrangement adopted a smart electrode arrangement using a combination of a Wenner four electrode arrangement and a Schlumberger electrode arrangement. Result: First, the characteristic of this technology is that the depth of smart multi-electrodes is organized differently to reduce the error range of the acquired data even in the stratigraphic structure with specificity between floors. Second, IT convergence technology was applied to enable real-time transmission and reception of information on land resistance data acquired from smart ground electrodes through the Internet of Things. Finally, it is possible to establish a regular management system and analyze big data accumulated in the server to check the trend of changes in various elements, and to model the optimal ground algorithm and ground system design for the IT convergence environment. Conclusion: This technology will reduce surge damage caused by lightning on urban infrastructure underlying the 4th industrial era and design an optimized ground system model to protect the safety and life of users. It is also expected to secure intellectual property rights of pure domestic technology to create jobs and revitalize our industry, which has been stagnant as a pandemic in the post-COVID-19 era.

Design and Implementation of CW Radar-based Human Activity Recognition System (CW 레이다 기반 사람 행동 인식 시스템 설계 및 구현)

  • Nam, Jeonghee;Kang, Chaeyoung;Kook, Jeongyeon;Jung, Yunho
    • Journal of Advanced Navigation Technology
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    • v.25 no.5
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    • pp.426-432
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    • 2021
  • Continuous wave (CW) Doppler radar has the advantage of being able to solve the privacy problem unlike camera and obtains signals in a non-contact manner. Therefore, this paper proposes a human activity recognition (HAR) system using CW Doppler radar, and presents the hardware design and implementation results for acceleration. CW Doppler radar measures signals for continuous operation of human. In order to obtain a single motion spectrogram from continuous signals, an algorithm for counting the number of movements is proposed. In addition, in order to minimize the computational complexity and memory usage, binarized neural network (BNN) was used to classify human motions, and the accuracy of 94% was shown. To accelerate the complex operations of BNN, the FPGA-based BNN accelerator was designed and implemented. The proposed HAR system was implemented using 7,673 logics, 12,105 registers, 10,211 combinational ALUTs, and 18.7 Kb of block memory. As a result of performance evaluation, the operation speed was improved by 99.97% compared to the software implementation.

Development of a Coupled Eulerian-Lagrangian Finite Element Model for Dissimilar Friction Stir Welding (Coupled Eulerian-Lagrangian기법을 이용한 이종 마찰교반용접 해석모델 개발)

  • Lim, Jae-Yong;Lee, Jinho
    • Journal of the Korea Academia-Industrial cooperation Society
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    • v.20 no.2
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    • pp.7-13
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    • 2019
  • This study aims to develop a FE Model to simulate dissimilar friction stir welding and to address its potential for fundamental analysis and practical applications. The FE model is based on Coupled Eulerian-Lagrangian approach. Multiphysics systems are calculated using explicit time integration algorithm, and heat generations by friction and inelastic heat conversion as well as heat transfer through the bottom surface are included. Using the developed model, friction stir welding between an Al6061T6 plate and an AZ61 plate were simulated. Three simulations are carried out varying the welding parameters. The model is capable of predicting the temperature and plastic strain fields and the distribution of void. The simulation results showed that temperature was generally greater in Mg plates and that, as a rotation speed increase, not the maximum temperature of Mg plate increased, but did the temperature of Al plate. In addition, the model could predict flash defects, however, the prediction of void near the welding tool was not satisfactory. Since the model includes the complex physics closely occurring during FSW, the model possibly analyze a lot of phenomena hard to discovered by experiments. However, practical applications may be limited due to huge simulation time.

Development of Simplified Immersed Boundary Method for Analysis of Movable Structures (가동물체형 구조물 해석을 위한 Simplified Immersed Boundary법의 개발)

  • Lee, Kwang-Ho;Kim, Do-Sam
    • Journal of Korean Society of Coastal and Ocean Engineers
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    • v.33 no.3
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    • pp.93-100
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    • 2021
  • Since the IB (Immersed Boundary) method, which can perform coupling analysis with objects and fluids having an impermeable boundary of arbitrary shape on a fixed grid system, has been developed, the IB method in various CFD models is increasing. The representative IB methods are the directing-forcing method and the ghost cell method. The directing-forcing type method numerically satisfies the boundary condition from the fluid force calculated at the boundary surface of the structure, and the ghost-cell type method is a computational method that satisfies the boundary condition through interpolation by placing a virtual cell inside the obstacle. These IB methods have a disadvantage in that the computational algorithm is complex. In this study, the simplified immersed boundary (SIB) method enables the analysis of temporary structures on a fixed grid system and is easy to expand to three proposed dimensions. The SIB method proposed in this study is based on a one-field model for immiscible two-phase fluid that assumes that the density function of each phase moves with the center of local mass. In addition, the volume-weighted average method using the density function of the solid was applied to handle moving solid structures, and the CIP method was applied to the advection calculation to prevent numerical diffusion. To examine the analysis performance of the proposed SIB method, a numerical simulation was performed on an object falling to the free water surface. The numerical analysis result reproduced the object falling to the free water surface well.

An Implementation of an Intelligent Access Point System Based on a Feed Forward Neural Network for Internet of Things (사물인터넷을 위한 신경망 기반의 지능형 액세스 포인트 시스템의 구현)

  • Lee, Youngchan;Lee, SoYeon;Kim, Dae-Young
    • Journal of Internet Computing and Services
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    • v.20 no.5
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    • pp.95-104
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    • 2019
  • Various kinds of devices are used for the Internet of Things (IoT) service, and IoT devices mainly use communication technology that uses the frequency of the unlicensed band. There are several types of communication technology in the unlicensed band, but WiFi is most commonly used. Devices used for IoT services vary in computing resources from devices with limited capabilities to smartphones and provide services over wireless networks such as WiFi. Most IoT devices can't perform complex operations for network control, thus they choose a WiFi access point (AP) based on signal strength. This causes a decrease in IoT service efficiency. In this paper, an intelligent AP system that can efficiently control the WiFi connection of the IoT devices is implemented. Based on the network information measured by the IoT device, the access point learns using a feed forward neural network algorithm, and predicts a network connection state to control the WiFi connection. By controlling the WiFi connection at the AP, the service efficiency of the IoT device can be improved.

Road Extraction from Images Using Semantic Segmentation Algorithm (영상 기반 Semantic Segmentation 알고리즘을 이용한 도로 추출)

  • Oh, Haeng Yeol;Jeon, Seung Bae;Kim, Geon;Jeong, Myeong-Hun
    • Journal of the Korean Society of Surveying, Geodesy, Photogrammetry and Cartography
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    • v.40 no.3
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    • pp.239-247
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    • 2022
  • Cities are becoming more complex due to rapid industrialization and population growth in modern times. In particular, urban areas are rapidly changing due to housing site development, reconstruction, and demolition. Thus accurate road information is necessary for various purposes, such as High Definition Map for autonomous car driving. In the case of the Republic of Korea, accurate spatial information can be generated by making a map through the existing map production process. However, targeting a large area is limited due to time and money. Road, one of the map elements, is a hub and essential means of transportation that provides many different resources for human civilization. Therefore, it is essential to update road information accurately and quickly. This study uses Semantic Segmentation algorithms Such as LinkNet, D-LinkNet, and NL-LinkNet to extract roads from drone images and then apply hyperparameter optimization to models with the highest performance. As a result, the LinkNet model using pre-trained ResNet-34 as the encoder achieved 85.125 mIoU. Subsequent studies should focus on comparing the results of this study with those of studies using state-of-the-art object detection algorithms or semi-supervised learning-based Semantic Segmentation techniques. The results of this study can be applied to improve the speed of the existing map update process.

A Comparative study on smoothing techniques for performance improvement of LSTM learning model

  • Tae-Jin, Park;Gab-Sig, Sim
    • Journal of the Korea Society of Computer and Information
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    • v.28 no.1
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    • pp.17-26
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    • 2023
  • In this paper, we propose a several smoothing techniques are compared and applied to increase the application of the LSTM-based learning model and its effectiveness. The applied smoothing technique is Savitky-Golay, exponential smoothing, and weighted moving average. Through this study, the LSTM algorithm with the Savitky-Golay filter applied in the preprocessing process showed significant best results in prediction performance than the result value shown when applying the LSTM model to Bitcoin data. To confirm the predictive performance results, the learning loss rate and verification loss rate according to the Savitzky-Golay LSTM model were compared with the case of LSTM used to remove complex factors from Bitcoin price prediction, and experimented with an average value of 20 times to increase its reliability. As a result, values of (3.0556, 0.00005) and (1.4659, 0.00002) could be obtained. As a result, since crypto-currencies such as Bitcoin have more volatility than stocks, noise was removed by applying the Savitzky-Golay in the data preprocessing process, and the data after preprocessing were obtained the most-significant to increase the Bitcoin prediction rate through LSTM neural network learning.