• Title/Summary/Keyword: Cold-adaptation

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Comparison of structure, function and regulation of plant cold shock domain proteins to bacterial and animal cold shock domain proteins

  • Chaikam, Vijay;Karlson, Dale T.
    • BMB Reports
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    • v.43 no.1
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    • pp.1-8
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    • 2010
  • The cold shock domain (CSD) is among the most ancient and well conserved nucleic acid binding domains from bacteria to higher animals and plants. The CSD facilitates binding to RNA, ssDNA and dsDNA and most functions attributed to cold shock domain proteins are mediated by this nucleic acid binding activity. In prokaryotes, cold shock domain proteins only contain a single CSD and are termed cold shock proteins (Csps). In animal model systems, various auxiliary domains are present in addition to the CSD and are commonly named Y-box proteins. Similar to animal CSPs, plant CSPs contain auxiliary C-terminal domains in addition to their N-terminal CSD. Cold shock domain proteins have been shown to play important roles in development and stress adaptation in wide variety of organisms. In this review, the structure, function and regulation of plant CSPs are compared and contrasted to the characteristics of bacterial and animal CSPs.

Psychrotolerance Mechanisms in Cold-Adapted Bacteria and their Perspectives as Plant Growth-Promoting Bacteria in Temperate Agriculture

  • Subramanian, Parthiban;Joe, Manoharan Melvin;Yim, Woo-Jong;Hong, Bo-Hui;Tipayno, Sherlyn C.;Saravanan, Venkatakrishnan Sivaraj;Yoo, Jae-Hong;Chung, Jong-Bae;Sultana, Tahera;Sa, Tong-Min
    • Korean Journal of Soil Science and Fertilizer
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    • v.44 no.4
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    • pp.625-636
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    • 2011
  • Cold-adapted bacteria survive in extremely cold temperature conditions and exhibit various mechanisms of adaptation to sustain their regular metabolic functions. These adaptations include several physiological and metabolic changes that assist growth in a myriad of ways. Successfully sensing of the drop in temperature in these bacteria is followed by responses which include changes in the outer cell membrane to changes in the central nucleoid of the cell. Their survival is facilitated through many ways such as synthesis of cryoprotectants, cold acclimation proteins, cold shock proteins, RNA degradosomes, Antifreeze proteins and ice nucleators. Agricultural productivity in cereals and legumes under low temperature is influenced by several cold adopted bacteria including Pseudomonas, Acinetobacter, Burkholderia, Exiguobacterium, Pantoea, Rahnella, Rhodococcus and Serratia. They use plant growth promotion mechanisms including production of IAA, HCN, and ACC deaminase, phosphate solublization and biocontrol against plant pathogens such as Alternaria, Fusarium, Sclerotium, Rhizoctonia and Pythium.

Expression and Purification of Recombinant Superoxide Dismutase (PaSOD) from Psychromonas arctica in Escherichia coli

  • Na, Ju-Mee;Im, Ha-Na;Lee, Kyung-Hee
    • Bulletin of the Korean Chemical Society
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    • v.32 no.7
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    • pp.2405-2409
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    • 2011
  • The psychrophilic bacteria Psychromonas arctica survives at subzero temperatures by having adapted several protective mechanisms against freezing and oxidative stresses. Many reactive oxygen species are likely generated in P. arctica as a result of reduced metabolic turnover rates. A previous study identified the pasod gene for superoxide dismutase from P. arctica using a series of PCR amplifications. Here, upon cloning into a His-tag fused plasmid, the sod gene from P. arctica (pasod) was successfully expressed by IPTG induction. His-tagged PaSOD was subsequently purified by $Ni^{2+}$-NTA affinity chromatography. The purified PaSOD exhibited a higher SOD activity than that of Escherichia coli (EcSOD) at all temperatures. The difference in activity between PaSOD and EcSOD becomes even more significant at 4$^{\circ}C$, indicating that PaSOD plays a functional role in the cold adaptation of P. arctica in the Arctic.

A study on the adaptive method of control model for tandem cold rolling mill (연속냉간압연기 제어모델의 적응수정방법에 관한 연구)

  • Lee, Won-Ho;Lee, Sang-Ryong
    • Transactions of the Korean Society of Mechanical Engineers A
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    • v.21 no.7
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    • pp.1030-1041
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    • 1997
  • The control model in the tandem cold rolling mill consists of many mathematical theories and is used to calculate the reference values such as the roll gap and the rolling speed for good operation of rolling mill. But, the control model used presently has a problem causing inaccurate prediction of the rolling force. By the parameter identification, it was found that the main factor causing inaccurate prediction of the rolling force was incorrect modeling of the friction coefficient and the flow stress. To get rid of the erroneous factor new adaptive schemes are suggested in this work. Those are a long-time adaptation by the iterative least-square method and a short-time adaptation by the recursive weighted least-square method respectively. The new equations for the friction coefficient and the flow stress are derived by applying the suggested adaptive algorithms. Through the on-line test in an actual mill, it is proved that the rolling force predicted by the new equations is more accurate than the one by the existing equations ever used.

Effect of Different Level of Monensin Supplemented with Cold Process Urea Molasses Mineral Block on In vitro Rumen Fermentation at Different Days of Adaptation with Monensin

  • De, Debasis;Singh, G.P.
    • Asian-Australasian Journal of Animal Sciences
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    • v.18 no.3
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    • pp.320-325
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    • 2005
  • Effect of period of adaptation and levels of monensin were studied for microbial fermentation/ digestibility to find out the optimum period of adaptation of monensin in rumen and suitable level of monensin in wheat straw+concentrate and wheat straw+UMMB diet. The mean digestibility of dry matter was decreased upto T-3 treatment (49.17%), however, digestibility of DM was affected upto period (P-2). NDF digestibility was affected due to treatment under P1 and P2 (p<0.05). Average digestibility of ADF was increased to 53.33% at T-3 level of monensin and P4 days of adaptation. TVFA (mmole/100 ml) were decreased from 9.49 in T-1 to 7.70 in T-7. Periods were not effectives except P2 (14 days of adaptation). Similarly, total gas was decrease with the increase of monensin levels in diet. Although acetate percentage in TVFA was not affected either due to level of monensin or period of adaptation but propionate was increased due to increase in monensin at 21 days of adaptation (P-3). Butyrate (%) was decreased significantly in T-2 to T-6 as compared to T-1 group. Total gas was significantly (p<0.01) higher in group T-1 (control) and it reduced significantly in T-5, however, differences in gas production between group T-3, T-5 and T-7 at P-1 was not significant. Methane production was reduced on P-3 and P-4 level of adaptation due to treatment. The overall result indicated that 21 days of adaptation with monensin was sufficient to mask the inhibiting effect of monensin to cell wall digestibility and 35 ppm monensin is optimum to reduce methane production and increase propionate productions.

Cold Shock Response of Leuconostoc mesenteroides SY1 Isolated from Kimchi

  • KIM JONG HWAN;PARK JAE-YONG;JEONG SEON-JU;CHUN JIYEON;KIM JEONG HWAN
    • Journal of Microbiology and Biotechnology
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    • v.15 no.4
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    • pp.831-837
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    • 2005
  • Low-temperature adaptation and cryoprotection were studied in Leuconostoc mesenteroides SYl, a strain isolated from Kimchi. L. mesenteroides SY1 cells grown in exponential growth phase at $30^{\circ}C$ were exposed to $15^{\circ}C,\;10^{\circ}C$, and $5^{\circ}C$ for 2, 4, and 6 h, respectively, and then frozen at $- 70^{\circ}C$ for 24 h. Survival ratio was measured after the cells were thawed. The freezing-thawing cycles were repeated four times. Preadapted cells survived better than non-adapted control cells, and the highest survival ratio ($96\%$) was observed for cells preadapted for 2 h at $5^{\circ}C$, whereas control cells showed only $22\%$. The 2D gel showed that two proteins (spots A and B) were induced in cells preadapted at lower temperatures. Spots A and B have the same molecular weight (7 kDa), but the pI was 4.6 for spot A and 4.3 for spot B. The first 29 and 15 amino acid sequences from spots A and B were determined, and they were identical, except for one amino acid. A csp gene was cloned, and nucleotide sequencing confirmed that the gene encoded spot A cold shock protein.

Cold Adaptation of Lactobacillus paraplantarum C7 Isolated from Kimchi

  • Kim, Su-Jung;Kim, Jong-Hwan;Park, Jae-Yong;Kim, Han-Taek;Jeong, Seon-Ju;Ha, Yeong-Lae;Yun, Han-Dae;Kim, Jeong-Hwan
    • Journal of Microbiology and Biotechnology
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    • v.14 no.5
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    • pp.1071-1074
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    • 2004
  • The effect of preadaptation at low temperature on cryoprotection was studied for Lactobacillus paraplantarum C7, a bacteriocin producer isolated from kimchi. L paraplantarum C7 cells in their log growth phase were incubated at $15^\circ{C}$, $10^\circ{C}$, or $5^\circ{C}$ for 2, 4, and 6 h, respectively, before being frozen at $-70^\circ{C}$. After 24 h of freezing, viable cells were counted after brief thawing. The freezing-thawing cycles were repeated three more times. Cells preadapted at $10^\circ{C}$ or $5^\circ{C}$ before freezing survived better than control cells, but preadaptation at $15^\circ{C}$ did not confer cryoprotection. Chloramphenicol addition did not destroy the cryoprotection, indicating that protein synthesis was not required for the development of cryoprotection. SDS-PAGE showed induction of a 6.5-kDa protein, a major cold-shock protein, in preadapted cells.

A Comparative Study of Clothes-Wearing Behaviors According to Differences in Indoor Heating Systems and Cold Sensitivity (난방방식과 추위민감도에 따른 착의행동)

  • Zhang, Chong;Jun, Dae Geun;Jeong, Woon Seon
    • The Korean Journal of Community Living Science
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    • v.26 no.1
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    • pp.115-126
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    • 2015
  • The study investigates the clothes-wearing behaviors of female college students based on differences in indoor heating systems and cold sensitivity. The respondents included a total of 281 female college students living in South Korea and China. Data were analyzed through an ANOVA and, a paired t-test based on SPSS 21.0. Korean students were less dependent on winter clothing than Chinese students for the whole body parts except for the trunk. Korean students were more likely to feel coldness more but wore less clothing. Korean students' clothes-wearing behaviors with respect to coldness depended on the indoor heating system. Korean students tended to buy warmer clothing, although they preferred not to wear undergarments and tended to wear and to wear less winter clothing. Chinese students showed more active clothes-wearing behaviors to keep their feet warm. Finally, groups divided by indoor heating systems and cold sensitivity showed different clothes-wearing behaviors in comparison to those groups based only on indoor heating systems. Even in similar weather conditions, clothes-wearing behaviors for cold adaptation depended on the indoor heating systems and cold sensitivity. The results suggest that this perspective should be taken into consideration when evaluating clothes-wearing behaviors of certain groups or individuals.

Trends in the effects of climate change on terrestrial ecosystems in the Republic of Korea

  • Choi, Sei-Woong;Kong, Woo-Seok;Hwang, Ga-Young;Koo, Kyung Ah
    • Journal of Ecology and Environment
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    • v.45 no.3
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    • pp.117-129
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    • 2021
  • In this review, we aimed to synthesize the current knowledge on the observed and projected effects of climate change on the ecosystems of Korea (i.e., the Republic of Korea (ROK) or South Korea), as well as the main causes of vulnerability and options for adaptation in these ecosystems based on a range of ecological and biogeographical data. To this end, we compiled a set of peer-reviewed papers published since 2014. We found that publication of climate-related studies on plants has decreased in the field of plant phenology and physiology, whereas such publication has rapidly increased in plant and animal community ecology, reflecting the range shifts and abundance change that are occurring under climate change. Plant phenology studies showed that climate change has increased growing seasons by advancing the timing of flowering and budburst while delaying the timing of leafing out. Community ecology studies indicated that the future ranges of cold-adapted plants and animals could shrink or shift toward northern and high-elevation areas, whereas the ranges of warm-adapted organisms could expand and/or shift toward the areas that the aforementioned cold-adapted biota previously occupied. This review provides useful information and new insights that will improve understanding of climate change effects on the ecosystems of Korea. Moreover, it will serve as a reference for policy-makers seeking to establish future sectoral adaptation options for protection against climate change.

Diagnosis of Office Occupant's Adaptation Level for Thermal Environment (사무실 근무자의 온열환경에 대한 적응수준 진단)

  • Kim, Yang-Weon
    • Korean Journal of Human Ecology
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    • v.12 no.5
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    • pp.747-754
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    • 2003
  • The actual clothing conditions were surveyed to diagnose clothing condition of Korean female in the view point of the adaptation to the thermal environment according to seasonal changes. Then, clothing microclimate, physiological responses, and subjective sensation were investigated through wearing trials on human body in climatic chamber based on the results from the survey. Factors to evaluate validity of clothing condition were clothing weight, clothing microclimate, physiological response of human body, and subjective sensation. The results were as follows: 1. Clothing weight per body surface area of the season was $856g/m^{2}$, $439g/m^{2}$ in summer, $630g/m^{2}$ in fall, and $1184g/m^{2}$ in winter. Cold - resistance of Korean female in office was superior to Japanese, inferior to residents of rural areas of Korea, and similar to male in office. However, in heat - resistance, female in office was inferior to residents of rural areas of Korea. 2. In spring, fall, winter, clothing microclimate temperature was a little higher than that in summer. Therefore, it was not a desirable wearing condition even though the clothing microclimate was comfortable zone. 3. Mean skin temperature of female in office was including within the range of Winslow's comfortable zone, but the range of comfortable zone in mean skin temperature of female was more narrow than Winslow's. Thus, it has problem for female to adaptation to thermal environment.

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