• Title/Summary/Keyword: Coding Sequence

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Hierarchical 3D Sgmentation of Image Sequence Using Motion Information Based on Mathematical Morphology (수리 형태학 기반의 움직임 정보를 이용한 연속영상의 계층적 3차원 분할)

  • 여영준;송근원;박영식;김기석;하영호
    • Journal of the Korean Institute of Telematics and Electronics S
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    • v.34S no.7
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    • pp.78-88
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    • 1997
  • A three dimensional-two spatical dimensions plus time-image segmentation is widely used in a very low bit rate image sequence coding because it can solve the region correspondence problem. Mathematical morphology is a very efficient tool for the segmentation because it deals well with geometric features such as size, shape, contrast and connectivity. But if the motion in the image sequence is large in time axis, the conventional 3D morphological segmentation algorithm have difficulty in solving region correspondence problem. To alleviate this problem, we propose the hierarchical image sequence segmentation algorithm that uses the region motion information. Since the motion of a region in previous level affects that in current level uses the previous motion information to increase region correspondence. Simulation result shows improved performance for sequence frames with large motion.

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Secretion of Human Angiogenin into Periplasm and Culture Medium with Its Eukaryotic Signal Sequence by Escherichia coli

  • Jung, Woo-Jung;Choi, Suk-Jung
    • BMB Reports
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    • v.30 no.1
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    • pp.80-84
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    • 1997
  • The synthesis and secretion of human angiogenin in E. coli by the natural leader sequence has been studied. We constructed a recombinant plasmid containing human angiogenin cDNA which encompassed all the coding region including leader sequence required for secretion. The recombinant plasmid was introduced into a suitable E. coli host. The angiogenin was detected in the culture medium and periplasm upon the induction of gene expression. The molecular weight of the secreted angiogenin was identical to that of authentic angiogenin purfied from human plasma when estimated by SDS-PAGE and immunoblotting. showing that the natural leader sequence was recognized and processed by the secretion machinery of E. coli. The angiogenin concentration in the culture medium reached a maximum within 2 h when expressed at $37^{\circ}C$ with 0.02~2 mM IPTG. In contrast, the expression level increased gradually over time up to 11 h at $23^{\circ}C$ with 0.002~2 mM IPTG and at $37^{\circ}C$ with 0.002 mM IPTG.

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DNA Information Hiding Method for DNA Data Storage (DNA 데이터 저장을 위한 DNA 정보 은닉 기법)

  • Lee, Suk-Hwan;Kwon, Ki-Ryong
    • Journal of the Institute of Electronics and Information Engineers
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    • v.51 no.10
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    • pp.118-127
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    • 2014
  • DNA data storage refers to any technique for storing massive digital data in base sequence of DNA and has been recognized as the future storage medium recently. This paper presents an information hiding method for DNA data storage that the massive data is hidden in non-coding strand based on DNA steganography. Our method maps the encrypted data to the data base sequence using the numerical mapping table and then hides it in the non-coding strand using the key that consists of the seed and sector length. Therefore, our method can preserve the protein, extract the hidden data without the knowledge of host DNA sequence, and detect the position of mutation error. Experimental results verify that our method has more high data capacity than conventional methods and also detects the positions of mutation errors by the parity bases.

Design of MCC Security System in Physical Layer (물리 계층 보안시스템 MCC부호기 설계)

  • Kim, Gun-Seok;Kong, Hyung-Yun
    • The Journal of the Institute of Internet, Broadcasting and Communication
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    • v.8 no.5
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    • pp.181-186
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    • 2008
  • Wireless data transmission is vulnerable to attackers and hackers. Recently, the fast development of wireless communication systems seamlessly increase the demand for security in this area. Moreover, error correction is especially important because various kinds of interferences among wireless devices. In order to solve two above problems, we propose to apply MCC (M-sequence Convolutional Code) in the system which is able to protect information and correct errors. The proposed system can obtain higher secure property by randomly changing the output connections by the proposed M-sequence. Performance of the system is analyzed according to BER (Bit Error Rate) and secure levels. The simulation results revealed that we can get the coding gain of 0.1 dB over conventional convolution coding technique. The proposed algorithm is installed in physical layer and easily implemented. Another advantage of our proposed (M-sequence and convolutional code) is that it can be applied to CDMA (Code Division Multiple Access) communication system.

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Comparative Genomics Study of Interferon-$\alpha$ Receptor-1 in Humans and Chimpanzees

  • Kim, Il-Chul;Chi, Seung-Wook;Kim, Dae-Won;Choi, Sang-Haeng;Chae, Sung-Hwa;Park, Hong-Seog
    • Genomics & Informatics
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    • v.3 no.4
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    • pp.142-148
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    • 2005
  • The immune response-related genes have been suggested to be the most favorable genes for positive selection during evolution. Comparing the entire DNA sequence of chimpanzee chromosome 22 (PTR22) with human chromosome 21 (HSA21), we have identified 15 orthologs having indel in their coding sequences. Among them, interferon-${\alpha}$ receptor-1 gene (IFNAR1), an immuneresponse-related gene, is subjected to comparative genomic analysis. Chimpanzee IFNAR1 showed the same genomic structure as human IFNAR1 (11 exons and 10 introns) except the 3 bp insertion in exon 4. The sequence alignment of IFNAR1 coding sequence indicated that 'ISPP' amino acid sequence motif is highly conserved in chimpanzee and other animals including mouse and chicken. However, the human IFNAR1 shows that one proline residue is missing in the sequence motif. The homology modeling of the IFNAR1 structures suggests that the proline deletion in human IFNAR1 leads to the formation of the following ${\alpha}$-helix, whereas two sequential prolines in chimpanzee IFNAR1 inhibit it. As a result, human IFNAR1 may adopt a characteristic structure distinct from chimpanzee IFNAR1. This human specific trait could contribute to specific immune response in the most optimized manner for humans. Further molecular biological studies on the IFNAR1 will help us to gain insights into the molecular implication of species-specific host-pathogen interaction in primate evolution.

A Bit-Error Resilient Wavelet Video Coding Scheme in Wireless Channels (무선 채널의 비트 에러에 강한 웨이블릿 비디오 코딩 기법)

  • 이주경;정기동
    • Journal of KIISE:Information Networking
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    • v.30 no.6
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    • pp.695-704
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    • 2003
  • A wavelet-based video stream is more susceptible to the network transmission errors than DCT-based video. This is because bit-errors in a subband of a video frame affect not only the other subbands within the current frame but also the subsequent frames. In this paper, we propose a video source coding scheme called IPC(Intra Prediction Coding) scheme in order to reduce the error propagation to the subsequent frames. In the proposed scheme, a subband except LL subband in the current frame refers to the lower-level subband within the same frame. This reduces the error propagation to subsequent frames. We evaluated the performance of our proposed scheme in the simulated wireless network environment. As a result of tests, it was shown that the proposed algorithm shows better performance than MRME in a heavy motion image sequence while IPC outperforms MRME at a high bit-rate in small motion image sequence.

Cloning, Sequencing and Expression Analysis of Porcine Uroplakin II Gene

  • Gwon Deuk-Nam;Kim Jin-Hoe
    • Proceedings of the KSAR Conference
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    • 2002.06a
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    • pp.90-90
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    • 2002
  • In this study, we report the cloning of the porcine UPII genomic DNA, which contains a putative full-length open reading frame encoding the UPII protein. A comparison of the porcine UPII gene coding sequence with the previously published mouse UPII sequence demonstrates that only the exon sequences are partially conserved. Northern and immunohistochemical analyses show that the porcine UPII gene is expressed only in the urothelium and that the protein specifically localizes to urothelial superficial cells. (omitted)

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Effect of Line-Width of Optical Sources on Performance of Spectral Amplitude Coding Optical CDMA Systems (광원 라인폭이 Spectral Amplitude Coding Optical CDMA시스템의 성능에 미치는 영향)

  • Jhee, Yoon Kyoo
    • Journal of the Institute of Electronics and Information Engineers
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    • v.52 no.2
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    • pp.119-124
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    • 2015
  • In this paper, we analyze the effect of line-width of optical sources on the performance of spectral amplitude coding (SAC) optical code division multiple-access (OCDMA) systems. For a performance analysis we use a symmetric balanced incomplete block design (BIBD) code as the code sequence because we can construct a series of code families by choosing different values of q and m. The ideal BIBD code (m=2) requires narrower line-width than the nonideal BIBD codes when the effective power is large ($P_{sr}=-10dBm$). But the nonideal BIBD codes (m>2) need narrower line-width than the ideal BIBD code when $P_{sr}=-25dBm$.

An Efficient Frame-Level Rate Control Algorithm for High Efficiency Video Coding

  • Lin, Yubei;Zhang, Xingming;Xiao, Jianen;Su, Shengkai
    • KSII Transactions on Internet and Information Systems (TIIS)
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    • v.10 no.4
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    • pp.1877-1891
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    • 2016
  • In video coding, the goal of rate control (RC) is not only to avoid the undesirable fluctuation in bit allocation, but also to provide a good visual perception. In this paper, a novel frame-level rate control algorithm for High Efficiency Video Coding (HEVC) is proposed. Firstly a model that reveals the relationship between bit per pixel (bpp), the bitrate of the intra frame and the bitrate of the subsequent inter frames in a group of pictures (GOP) is established, based on which the target bitrate of the first intra frame is well estimated. Then a novel frame-level bit allocation algorithm is developed, which provides a robust bit balancing scheme between the intra frame and the inter frames in a GOP to achieve the visual quality smoothness throughout the whole sequence. Our experimental results show that when compared to the RC scheme for HEVC encoder HM-16.0, the proposed algorithm can produce reconstructed frames with more consistent objective video quality. In addition, the objective visual quality of the reconstructed frames can be improved with less bitrate.

Fast Disparity Vector Estimation using Motion vector in Stereo Image Coding (스테레오 영상에서 움직임 벡터를 이용한 고속 변이 벡터 추정)

  • Doh, Nam-Keum;Kim, Tae-Yong
    • Journal of the Institute of Electronics Engineers of Korea SP
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    • v.46 no.5
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    • pp.56-65
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    • 2009
  • Stereoscopic images consist of the left image and the right image. Thus, stereoscopic images have much amounts of data than single image. Then an efficient image compression technique is needed, the DPCM-based predicted coding compression technique is used in most video coding standards. Motion and disparity estimation are needed to realize the predicted coding compression technique. Their performing algorithm is block matching algorithm used in most video coding standards. Full search algorithm is a base algorithm of block matching algorithm which finds an optimal block to compare the base block with every other block in the search area. This algorithm presents the best efficiency for finding optimal blocks, but it has very large computational loads. In this paper, we have proposed fast disparity estimation algorithm using motion and disparity vector information of the prior frame in stereo image coding. We can realize fast disparity vector estimation in order to reduce search area by taking advantage of global disparity vector and to decrease computational loads by limiting search points using motion vectors and disparity vectors of prior frame. Experimental results show that the proposed algorithm has better performance in the simple image sequence than complex image sequence. We conclude that the fast disparity vector estimation is possible in simple image sequences by reducing computational complexities.