• Title/Summary/Keyword: Clustered segment index

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Clustered Segment Index Scheme for P2P VOD Service on Virtual Mesh Overlay Network (가상 메시 오버레이 네트워크상에서의 P2P VOD 서비스를 위한 클러스터 세그먼트 인덱스 기법)

  • Lim, Pheng-Un;Choi, Hwang-Kyu
    • The Transactions of The Korean Institute of Electrical Engineers
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    • v.65 no.6
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    • pp.1052-1059
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    • 2016
  • Video-on-Demand(VoD) is one of the most popular media streaming which attracted many researchers' attention. VMesh is one of the most cited works in the field of the VoD system. VMesh is proposed to solve the problem of random seeking functionality. However, a large number of the DHT(Distributed Hash Table) searches in VMesh is sill the main problem which needs to be solved. In order to reduce the number of the DHT searches, the clustered segment index(CSI) scheme is proposed. In this scheme, the video segments are divided into clusters. The segment information of the video segments, which are clustered into the same cluster, are stored in the same clustered segment index that can be searched by using the hash key. Each peer also can request the required segments by using this clustered segment index. The experiment results show that the number of the DHT searches in the proposed scheme is less than that of VMesh even in case of peers leave and join the network or peers perform the fast forward/backward operations.

Clustered Segment Index for Efficient Approximate Searching on the Secondary Structure of Protein Sequences (클러스터 세그먼트 인덱스를 이용한 단백질 이차 구조의 효율적인 유사 검색)

  • Seo Min-Koo;Park Sang-Hyun;Won Jung-Im
    • Journal of KIISE:Databases
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    • v.33 no.3
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    • pp.251-260
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    • 2006
  • Homology searching on the primary structure (i.e., amino acid arrangement) of protein sequences is an essential part in predicting the functions and evolutionary histories of proteins. However, proteins distant in an evolutionary history do not conserve amino acid residue arrangements, while preserving their structures. Therefore, homology searching on proteins' secondary structure is quite important in finding out distant homology. In this manuscript, we propose an indexing scheme for efficient approximate searching on the secondary structure of protein sequences which can be easily implemented in RDBMS. Exploiting the concept of clustering and lookahead, the proposed indexing scheme processes three types of secondary structure queries (i.e., exact match, range match, and wildcard match) very quickly. To evaluate the performance of the proposed method, we conducted extensive experiments using a set of actual protein sequences. CSI was proved to be faster than the existing indexing methods up to 6.3 times in exact match, 3.3 times in range match, and 1.5 times in wildcard match, respectively.