• Title/Summary/Keyword: Cell fractionation

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Enrichment Strategies for Identification and Characterization of Phosphoproteome

  • Lee, Sun Young;Kang, Dukjin;Hong, Jongki
    • Mass Spectrometry Letters
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    • v.6 no.2
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    • pp.31-37
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    • 2015
  • Phosphorylation upon protein is well known to a key regulator that implicates in modulating many cellular processes like growth, migration, and differentiation. Up to date, grafting of multidimensional separation techniques onto advanced mass spectrometry (MS) has emerged as a promising tool for figuring out the biological functions of phosphorylation in a cell. However, advanced MS-based phosphoproteomics is still challenging, due to its intrinsic issues, i.e., low stoichiometry, less susceptibility in positive ion mode, and low abundance in biological sample. To overcome these bottlenecks, diverse techniques (e.g., SCX, HILIC, ERLIC, IMAC, TiO2, etc.) are continuously developed for on-/off-line enrichment of phosphorylated protein (or peptide) from biological samples, thereby helping qualitative/quantitative determination of phosphorylated protein and its phosphorylated sites. In this review, we introduce to the overall views of enrichment tools that are universally used to selectively isolate targeted phosphorylated protein (or peptide) from ordinary ones before MS-based phospoproteomic analysis.

A Novel Helicosporium Isolate and Its Antimicrobial and Cytotoxic Pigment

  • Choi, Hye Jung;Lee, Sang Myeong;Kim, Sun-Hee;Kim, Dong Wan;Choi, Young Whan;Joo, Woo Hong
    • Journal of Microbiology and Biotechnology
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    • v.22 no.9
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    • pp.1214-1217
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    • 2012
  • One Helicosporium strain, isolated from a wilted chestnut tree, evidenced in vitro antimicrobial activity against various types of bacteria and fungi, and generated a diffusible pigment. The antimicrobial compounds and the diffusible pigment of the Helicosporium sp. isolate were purified via solvent fractionation, column chromatography, and recycling preparative chromatography. Both the major antimicrobial compound and the diffusible pigment were identified as 2-methylresorcinol via nuclear magnetic resonance spectroscopy. Therefore, 2-methylresorcinol, a diffusible pigment generated by Helicosporium sp., appears to be an active antimicrobial principle. This pigment also exhibited considerable cytotoxicity against mammalian cells.

Cytotoxic Constituents of Sorbaria sorbifolia var. stellipila

  • Kim, Dae-Keun;Choi, Sang-Hoon;Lee, Jung-Ock;Ryu, Shi-Yong;Park, Dae-Kyu;Shin, Dae-Hee;Jung, Jee-Hyung;Pyo, Suhk-Keung;Lee, Kang-Ro;Zee, Ok-Pyo
    • Archives of Pharmacal Research
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    • v.20 no.1
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    • pp.85-87
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    • 1997
  • The activity-guided fractionation upon the MeOH extract of the aerial parts of Sorbaria sorbifolia var. stellipila led to the isolation of two cucurbitacin-compounds, cucurbitacin D and cucurbitacin F, as active principles. Two compounds were shown to exhibit significant cytotoxicity against cultured human tumor cell lines, A-549, SK-OV-3, SK-MEL-2, XF-498, and HCT 15.

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The anti-inflammatory activity of Kalopanax pictus bark extract (V). Effects of saponins from KP on $NF-_K/B$ and elastase activities

  • Li, Da-Wei;Ahn, Kwang-Seok;Joo, Eun-Ji;Cho, So-Yean;Jeong, Choon-Sik;Lee, Eun-Bang;Kim, Yeong-Shik
    • Proceedings of the PSK Conference
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    • 2002.10a
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    • pp.255.3-256
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    • 2002
  • In the previous studies. we confirmed the anti-inflammatory components of Kalopanax pictus bark using activity-guided fractionation in vivo. For the elucidation of anti-inflammatory mechanism, we evaluated the effects of these components on the inhibition of NF-$\sub$K/B activity and human leukocyte elastase. A cell-based assay system developed in our laboratory was used in transfectant RAW 264.7 cells. (omitted)

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A New Glycerol Ether from a Marine Sponge Stelletta Species

  • Lee, Seung-Yeon;Zhao, Qingchun;Choi, Kyu-Teak;Hong, Jong-Ki;Lee, Dong-Seok;Lee, Chong-O.;Jung, Jee-H.
    • Natural Product Sciences
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    • v.9 no.4
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    • pp.232-234
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    • 2003
  • A new glycerol ether has been isolated from a marine sponge Stelletta sp. By bioactivity-guided fractionation. The structure was established on the basis of NMR and MS analyses. The compound was evaluated for cytotoxicity against a small panel of five human tumor cell lines and exhibited significant cytotoxicity.

Antitumor Activity of Psorelea corylifolia

  • Ryu, Shi-Yong;Choi, Sang-Un;Lee, Chong-Ock;Zee, Ok-Pyo
    • Archives of Pharmacal Research
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    • v.15 no.4
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    • pp.356-359
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    • 1992
  • The activity-oriented fractionation of Psoralea corylifolia led to an isolation of a (+) bakuchio 1 as an activ eprinciple of its antitumoral property in vitro 1 was observed to exhibit a mild cytotoxicity against five kinds of cultured human cancer cell lines, i. e. the A549, SK-OV-3, SK-MEL-2, XF-498 and HCT15. The synthesized 2, 3-epoxide of (+)-bakuchiol 3 showed the similar activity as the (+) bakuchiol 1, whereas the other oxidation derivatives 4 and 5 including the acetyl (+) bakuchiol 2 showed a decreased activity.

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Antitumor Activity of some Phenolic Components in Plants

  • Ryu, Shi-Yong;Choi, Sang-Un;Lee, Chong-Ock;Lee, Seung-Ho;Ahn, Jong-Woong;Zee, Ok-Pyo
    • Archives of Pharmacal Research
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    • v.17 no.1
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    • pp.42-44
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    • 1994
  • The activity-guided fractionation of some medicinal plants led to yield five kinds of natural stilbene compounds namely 3, 5-dihydroxy-4'-methoxystillbene(I), rhapontigenin(II), reveratrol(III), rhaponticin(IV) and piceid(V) and two common flavonoids, apigenin(VI) and luteolin(VII) as active principles of the antitumor property, in vitro, against five kinds of human tumor cell lines, A-549, SK-OV-3, SK-MEL-2, XF-498 and HCT15.

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Cytotoxic Constituents of Saussurea lappa

  • Jung, Jee-Hyung;Kim, Young-Soo;Lee, Chong-Ock;Kang, Sam-Sik;Park, Jong-Hee;Im, Kwang-Sik
    • Archives of Pharmacal Research
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    • v.21 no.2
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    • pp.153-156
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    • 1998
  • The crude extract of Saussurea lappa displayed significant lethality to brine shrimp larvae. Investigation of the causative components by bioactivity-directed fractionation resulted in the isolation of three $C_17$-polyene alcohols. Based on various nmr spectral data, these compounds were identified as shikokiols which had been previously isolated from Cirsium nipponicum and/or Centaurea aegyptica. These $C_17$-polyene alcohols exhibited moderate cytotoxicities against the human tumor cell lines, A549, SK-OV-3, SK-MEL-2, XF498, and HCT15.

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Pentacyclic Triterpenoids and Their Cytotoxicity from the Stem Bark of Styrax japonica S. et Z.

  • Kim, Mi-Ran;Lee, Hyang-Hee;Hahm, Kyung-Soo;Moon, Young-Hee;Woo, Eun-Rhan
    • Archives of Pharmacal Research
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    • v.27 no.3
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    • pp.283-286
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    • 2004
  • The methylene chloride soluble fraction of MeOH extract from the stem bark of Styrax japonica S. et Z. (Styracaceae) showed significant cytotoxicity by SRB method against five human tumor cell lines. Four known pentacyclic triterpenoids, oleanolic aldehyde acetate (1), erythrodiol-3-acetate (2), euphorginol (3), and anhydrosophoradiol -3-acetate (4) were isolated by activity-guided fractionation. Their structures were determined by chemical and spectral analysis. Compounds 1-4 were isolated from S. japonica for the first time.

Studies on Lectins from Marine Animal Chlorostoma argyrostoma turbinatum (해양동물 구멍밤고둥의 렉틴 성분 연구)

  • Chung, See-Ryun;Choi, Il-Shik;Jeune, Kyung-Hee
    • Korean Journal of Pharmacognosy
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    • v.25 no.2
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    • pp.121-131
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    • 1994
  • Two kinds of new lectins, CATL-I and CATL-II, were partially purified from the intestine of Chlorostoma argyrostoma turbunatum by physical saline extraction, salt fractionation, ion exchange chromatography and gel filtration. CATL-I and CATL-II were purified 39.4 and 15.8 fold with a yield of 8.8 and 7.4%, respectively. On polyacrylamide gel electrophoresis, CATL-I demonstrated one major and one minor bands. This lectin agglutinated human and other animal erythrocytes nonspecifically and also agglutinated murine splenic lymphocytes. Carbohydrate specificity of the lectins was determined by inhibition of the agglutinability by methyl-${\alpha}-_D$-galactopyranoside and $_L-rhamnose$ at a final concentration of 6 mM. The lectins contained relatively high amounts of acidic amino acids, but the contents of sulfur containing amino acids were very low or was not estimated. Immunochemical studies were carried out to identify some properties of marine animal lectins.

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